AT3G11530 : -
Query Information
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AGICode AT3G11530
Description Vacuolar protein sorting 55 (VPS55) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G11530 Vacuolar protein sorting 55 (VPS55) family protein 1 0.34 -0.32
2 AT5G47420 Tryptophan RNA-binding attenuator protein-like 0.72 0.33 -0.31
3 AT5G65710 HAESA-like 2 HAESA-like 2 -0.71 0.29 -0.31
4 AT3G21350 RNA polymerase transcriptional regulation mediator-related MED6 0.68 0.31 -0.34
5 AT1G30290 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.3 -0.33
6 AT4G04880 adenosine/AMP deaminase family protein 0.68 0.31 -0.31
7 AT2G23360 Plant protein of unknown function (DUF869) -0.67 0.33 -0.32
8 AT5G09740 histone acetyltransferase of the MYST family 2 histone acetyltransferase of the
MYST family 2		 0.67 0.29 -0.33
9 AT4G28200 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: RNA
processing; LOCATED IN: intracellular; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: RNA-processing protein, HAT
helix (InterPro:IPR003107), U3 small nucleolar
RNA-associated protein 6 (InterPro:IPR013949); Has 492
Blast hits to 480 proteins in 206 species: Archae - 0;
Bacteria - 2; Metazoa - 128; Fungi - 191; Plants - 60;
Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).		 -0.67 0.34 -0.31
10 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.67 0.33 -0.32
11 AT1G09250 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.66 0.3 -0.32
12 AT1G02160 Cox19 family protein (CHCH motif) 0.66 0.31 -0.33
13 AT1G49480 related to vernalization1 1 related to vernalization1 1 0.66 0.31 -0.31
14 AT1G08110 lactoylglutathione lyase family protein / glyoxalase I
family protein		 0.66 0.31 -0.3
15 AT5G55000 potassium channel tetramerisation domain-containing protein
/ pentapeptide repeat-containing protein		 FIP2 0.66 0.32 -0.3
16 AT1G06060 LisH and RanBPM domains containing protein 0.65 0.31 -0.32
17 AT1G17410 Nucleoside diphosphate kinase family protein 0.65 0.31 -0.31
18 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.65 0.3 -0.34
19 AT5G11500 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF814 (InterPro:IPR008532); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.65 0.33 -0.31
20 AT4G30970 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.65 0.32 -0.31
21 AT5G12310 RING/U-box superfamily protein 0.65 0.32 -0.31
22 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 0.65 0.32 -0.34
23 AT2G17530 Protein kinase superfamily protein 0.64 0.31 -0.32
24 AT1G12780 UDP-D-glucose/UDP-D-galactose 4-epimerase 1 A. THALIANA UDP-GLC 4-EPIMERASE 1,
UDP-D-glucose/UDP-D-galactose
4-epimerase 1		 0.64 0.32 -0.31
25 AT3G03860 APR-like 5 APR-like 5, APR-like 5 0.64 0.33 -0.32
26 AT5G03440 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.32 -0.31
27 AT5G41080 PLC-like phosphodiesterases superfamily protein AtGDPD2, glycerophosphodiester
phosphodiesterase 2		 0.64 0.31 -0.32
28 AT3G52860 unknown protein; Has 86 Blast hits to 86 proteins in 36
species: Archae - 0; Bacteria - 2; Metazoa - 41; Fungi -
13; Plants - 26; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.64 0.3 -0.32
29 AT5G42960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, chloroplast, plastid, chloroplast envelope;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G45170.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.33 -0.3
30 AT1G27550 F-box family protein 0.64 0.31 -0.3
31 AT4G34330 Protein of unknown function (DUF677) -0.63 0.3 -0.31
32 AT5G46030 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF701, zinc-binding putative
(InterPro:IPR007808); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.63 0.31 -0.3
33 AT1G26370 RNA helicase family protein -0.63 0.31 -0.29
34 AT3G02290 RING/U-box superfamily protein 0.63 0.3 -0.31
35 AT2G02660 F-box associated ubiquitination effector family protein 0.63 0.31 -0.3
36 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 0.63 0.3 -0.32
37 AT3G24080 KRR1 family protein -0.63 0.3 -0.32
38 AT5G18650 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.62 0.32 -0.34
39 AT4G10280 RmlC-like cupins superfamily protein 0.62 0.32 -0.29
40 AT3G18100 myb domain protein 4r1 myb domain protein 4R1, myb domain
protein 4r1		 -0.62 0.32 -0.32
41 AT5G51160 Ankyrin repeat family protein -0.62 0.29 -0.32
42 AT4G25700 beta-hydroxylase 1 B1, BETA CAROTENOID HYDROXYLASE 1,
beta-hydroxylase 1, chy1		 0.62 0.3 -0.32
43 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).		 0.62 0.34 -0.31
44 AT5G50350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.61 0.31 -0.34
45 AT1G55330 arabinogalactan protein 21 arabinogalactan protein 21,
ARABINOGALACTAN PROTEIN 21		 0.61 0.32 -0.31
46 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein -0.61 0.3 -0.31
47 AT2G29220 Concanavalin A-like lectin protein kinase family protein -0.61 0.28 -0.32
48 AT3G12960 unknown protein; Has 44 Blast hits to 44 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.31 -0.3
49 AT4G36180 Leucine-rich receptor-like protein kinase family protein -0.61 0.29 -0.31
50 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751		 0.6 0.35 -0.34
51 AT2G29390 sterol 4-alpha-methyl-oxidase 2-2 STEROL 4-ALPHA-METHYL-OXIDASE 2,
Arabidopsis thaliana sterol
4-alpha-methyl-oxidase 2-2, sterol
4-alpha-methyl-oxidase 2-2		 0.6 0.35 -0.32
52 AT2G38660 Amino acid dehydrogenase family protein 0.6 0.31 -0.32
53 AT4G32010 HSI2-like 1 HSI2-L1, HSI2-like 1,
VP1/ABI3-LIKE 2		 -0.6 0.3 -0.3
54 AT3G60910 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.6 0.31 -0.32
55 AT5G44440 FAD-binding Berberine family protein -0.6 0.31 -0.29
56 AT1G68270 AMP-dependent synthetase and ligase family protein -0.6 0.34 -0.33
57 AT5G61440 atypical CYS HIS rich thioredoxin 5 atypical CYS HIS rich thioredoxin
5		 0.6 0.31 -0.3
58 AT2G29190 pumilio 2 pumilio 2, pumilio 2 -0.6 0.3 -0.32
59 AT4G04670 Met-10+ like family protein / kelch repeat-containing
protein		 -0.6 0.28 -0.31
60 AT5G13680 IKI3 family protein ABA-OVERLY SENSITIVE 1, AtELP1,
ELONGATA 2		 -0.6 0.31 -0.32
61 AT1G49880 Erv1/Alr family protein AtErv1, EMBRYO DEFECTIVE 3106,
Erv1		 0.6 0.31 -0.3
62 AT3G52360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35850.1); Has 34 Blast
hits to 34 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.33 -0.31
63 AT1G53590 Calcium-dependent lipid-binding (CaLB domain) family
protein		 NTMC2T6.1, NTMC2TYPE6.1 -0.59 0.32 -0.31
64 AT2G36920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02870.1); Has 13 Blast hits to 11
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.59 0.3 -0.31
65 AT1G54850 HSP20-like chaperones superfamily protein 0.59 0.31 -0.31
66 AT1G48160 signal recognition particle 19 kDa protein, putative /
SRP19, putative		 0.59 0.32 -0.31
67 AT3G30190 transposable element gene -0.59 0.31 -0.31
68 AT2G06890 transposable element gene -0.59 0.33 -0.32
69 AT4G14385 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: vacuole; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Histone H4
acetyltransferase, NuA4 complex, Eaf6 (InterPro:IPR015418);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.59 0.31 -0.32
70 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 0.59 0.32 -0.3
71 AT2G16835 Aquaporin-like superfamily protein -0.58 0.31 -0.32
72 AT4G17380 MUTS-like protein 4 ARABIDOPSIS MUTS HOMOLOG 4, MUTS
HOMOLOG 4, MUTS-like protein 4		 0.58 0.32 -0.33
73 AT2G36350 Protein kinase superfamily protein -0.58 0.31 -0.3
74 AT2G28590 Protein kinase superfamily protein -0.58 0.31 -0.3
75 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 -0.58 0.32 -0.31
76 AT1G32370 tobamovirus multiplication 2B tobamovirus multiplication 2B,
TTM1		 0.58 0.32 -0.32
77 AT1G49740 PLC-like phosphodiesterases superfamily protein 0.58 0.32 -0.31
78 AT1G48120 hydrolases;protein serine/threonine phosphatases -0.58 0.32 -0.32
79 AT5G66130 RADIATION SENSITIVE 17 RADIATION SENSITIVE 17, RADIATION
SENSITIVE 17		 -0.58 0.32 -0.3
80 AT5G63480 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.3 -0.32
81 AT5G19700 MATE efflux family protein -0.58 0.31 -0.3
82 AT1G22885 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.29 -0.29
83 AT2G13600 Pentatricopeptide repeat (PPR) superfamily protein -0.58 0.3 -0.3
84 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 -0.58 0.32 -0.32
85 AT4G24200 Transcription elongation factor (TFIIS) family protein -0.58 0.3 -0.34
86 AT1G48180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits
to 39 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.31 -0.31
87 AT4G35700 zinc finger (C2H2 type) family protein DUO1-activated zinc finger 3 -0.57 0.32 -0.31
88 AT5G27050 AGAMOUS-like 101 AGAMOUS-like 101 -0.57 0.28 -0.32
89 AT5G26210 alfin-like 4 alfin-like 4 0.57 0.31 -0.31
90 AT1G30010 Intron maturase, type II family protein -0.57 0.34 -0.3
91 AT5G27810 MADS-box transcription factor family protein 0.57 0.3 -0.32
92 AT1G01160 GRF1-interacting factor 2 GRF1-interacting factor 2 0.57 0.29 -0.32
93 AT2G21300 ATP binding microtubule motor family protein -0.57 0.32 -0.31
94 AT1G07160 Protein phosphatase 2C family protein -0.57 0.31 -0.3
95 AT3G59130 Cysteine/Histidine-rich C1 domain family protein 0.57 0.3 -0.31
96 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 0.57 0.29 -0.33
97 AT1G26500 Pentatricopeptide repeat (PPR) superfamily protein -0.56 0.29 -0.32
98 AT1G33250 Protein of unknown function (DUF604) -0.56 0.34 -0.3
99 AT1G04100 indoleacetic acid-induced protein 10 indoleacetic acid-induced protein
10		 -0.55 0.33 -0.33
100 AT1G51640 exocyst subunit exo70 family protein G2 exocyst subunit exo70 family
protein G2, exocyst subunit exo70
family protein G2		 -0.55 0.29 -0.31
101 AT2G36470 Plant protein of unknown function (DUF868) -0.55 0.3 -0.33
102 AT1G63730 Disease resistance protein (TIR-NBS-LRR class) family -0.55 0.32 -0.32
103 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 -0.55 0.32 -0.31
104 AT2G04600 transposable element gene -0.55 0.31 -0.33
105 AT2G01740 Tetratricopeptide repeat (TPR)-like superfamily protein -0.54 0.32 -0.32
106 AT5G11730 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.54 0.32 -0.31
107 AT3G66652 fip1 motif-containing protein -0.54 0.31 -0.31
108 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 -0.54 0.31 -0.31
109 AT3G04150 RmlC-like cupins superfamily protein -0.54 0.31 -0.32
110 AT3G61820 Eukaryotic aspartyl protease family protein -0.54 0.32 -0.32