AGICode | AT3G11400 |
Description | eukaryotic translation initiation factor 3G1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G11400 | eukaryotic translation initiation factor 3G1 | ATEIF3G1, eukaryotic translation initiation factor 3G1 |
1 | 0.3 | -0.3 | ||
2 | AT3G05560 | Ribosomal L22e protein family | 0.91 | 0.31 | -0.31 | |||
3 | AT1G18080 | Transducin/WD40 repeat-like superfamily protein | ATARCA, RACK1A, RECEPTOR FOR ACTIVATED C KINASE 1 A |
0.91 | 0.31 | -0.33 | ||
4 | AT5G10360 | Ribosomal protein S6e | embryo defective 3010, Ribosomal protein small subunit 6b |
0.91 | 0.33 | -0.31 | ||
5 | AT4G16720 | Ribosomal protein L23/L15e family protein | 0.9 | 0.32 | -0.33 | |||
6 | AT2G44120 | Ribosomal protein L30/L7 family protein | 0.9 | 0.32 | -0.31 | |||
7 | AT1G67430 | Ribosomal protein L22p/L17e family protein | 0.9 | 0.31 | -0.31 | |||
8 | AT2G01250 | Ribosomal protein L30/L7 family protein | 0.9 | 0.32 | -0.3 | |||
9 | AT1G26880 | Ribosomal protein L34e superfamily protein | 0.9 | 0.32 | -0.33 | |||
10 | AT5G47700 | 60S acidic ribosomal protein family | 0.9 | 0.3 | -0.32 | |||
11 | AT2G32060 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.9 | 0.3 | -0.33 | |||
12 | AT5G57290 | 60S acidic ribosomal protein family | 0.89 | 0.32 | -0.3 | |||
13 | AT1G02780 | Ribosomal protein L19e family protein | embryo defective 2386 | 0.89 | 0.34 | -0.32 | ||
14 | AT2G27530 | Ribosomal protein L1p/L10e family | PIGGYBACK1 | 0.89 | 0.3 | -0.34 | ||
15 | AT2G19730 | Ribosomal L28e protein family | 0.89 | 0.34 | -0.33 | |||
16 | AT1G04480 | Ribosomal protein L14p/L23e family protein | 0.88 | 0.3 | -0.32 | |||
17 | AT3G53430 | Ribosomal protein L11 family protein | 0.88 | 0.34 | -0.31 | |||
18 | AT2G27720 | 60S acidic ribosomal protein family | 0.88 | 0.32 | -0.31 | |||
19 | AT3G53020 | Ribosomal protein L24e family protein | RIBOSOMAL PROTEIN L24, RPL24B, SHORT VALVE1 |
0.88 | 0.31 | -0.31 | ||
20 | AT2G36620 | ribosomal protein L24 | ribosomal protein L24 | 0.88 | 0.31 | -0.32 | ||
21 | AT3G04840 | Ribosomal protein S3Ae | 0.88 | 0.32 | -0.32 | |||
22 | AT3G09200 | Ribosomal protein L10 family protein | 0.88 | 0.3 | -0.32 | |||
23 | AT2G39460 | ribosomal protein L23AA | ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN L23A, RIBOSOMAL PROTEIN L23A, RIBOSOMAL PROTEIN L23A1, ribosomal protein L23AA |
0.88 | 0.32 | -0.32 | ||
24 | AT3G49010 | breast basic conserved 1 | breast basic conserved 1, breast basic conserved 1, 40S RIBOSOMAL PROTEIN |
0.87 | 0.34 | -0.31 | ||
25 | AT3G11510 | Ribosomal protein S11 family protein | 0.87 | 0.32 | -0.32 | |||
26 | AT5G39740 | ribosomal protein L5 B | OLIGOCELLULA 7, ribosomal protein L5 B |
0.87 | 0.33 | -0.31 | ||
27 | AT5G20920 | eukaryotic translation initiation factor 2 beta subunit | eukaryotic translation initiation factor 2 beta subunit, embryo defective 1401 |
0.87 | 0.32 | -0.33 | ||
28 | AT4G31700 | ribosomal protein S6 | ribosomal protein S6, RPS6A | 0.87 | 0.3 | -0.31 | ||
29 | AT3G60770 | Ribosomal protein S13/S15 | 0.87 | 0.3 | -0.32 | |||
30 | AT5G07090 | Ribosomal protein S4 (RPS4A) family protein | 0.87 | 0.33 | -0.31 | |||
31 | AT2G47610 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.87 | 0.32 | -0.31 | |||
32 | AT5G27770 | Ribosomal L22e protein family | 0.86 | 0.32 | -0.3 | |||
33 | AT5G52650 | RNA binding Plectin/S10 domain-containing protein | 0.86 | 0.33 | -0.3 | |||
34 | AT3G02080 | Ribosomal protein S19e family protein | 0.86 | 0.31 | -0.34 | |||
35 | AT3G20050 | T-complex protein 1 alpha subunit | T-complex protein 1 alpha subunit, T-complex protein 1 alpha subunit |
0.86 | 0.32 | -0.31 | ||
36 | AT5G20160 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.86 | 0.31 | -0.33 | |||
37 | AT1G54690 | gamma histone variant H2AX | GAMMA H2AX, gamma histone variant H2AX, H2AXB, histone H2A 3 |
0.86 | 0.31 | -0.33 | ||
38 | AT3G09630 | Ribosomal protein L4/L1 family | 0.86 | 0.32 | -0.31 | |||
39 | AT2G27710 | 60S acidic ribosomal protein family | 0.85 | 0.34 | -0.33 | |||
40 | AT5G24840 | tRNA (guanine-N-7) methyltransferase | 0.85 | 0.33 | -0.33 | |||
41 | AT5G15200 | Ribosomal protein S4 | 0.85 | 0.32 | -0.33 | |||
42 | AT4G15000 | Ribosomal L27e protein family | 0.85 | 0.33 | -0.33 | |||
43 | AT5G64140 | ribosomal protein S28 | ribosomal protein S28 | 0.85 | 0.32 | -0.31 | ||
44 | AT2G39390 | Ribosomal L29 family protein | 0.85 | 0.3 | -0.32 | |||
45 | AT3G12390 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein |
0.85 | 0.31 | -0.32 | |||
46 | AT3G02560 | Ribosomal protein S7e family protein | 0.85 | 0.34 | -0.33 | |||
47 | AT3G55380 | ubiquitin-conjugating enzyme 14 | ubiquitin-conjugating enzyme 14 | 0.85 | 0.29 | -0.31 | ||
48 | AT5G27850 | Ribosomal protein L18e/L15 superfamily protein | 0.84 | 0.34 | -0.3 | |||
49 | AT1G69620 | ribosomal protein L34 | ribosomal protein L34 | 0.84 | 0.3 | -0.33 | ||
50 | AT4G25890 | 60S acidic ribosomal protein family | 0.84 | 0.33 | -0.31 | |||
51 | AT3G49430 | SER/ARG-rich protein 34A | Serine/Arginine-Rich Protein Splicing Factor 34a, Serine/Arginine-Rich Protein Splicing Factor 34a, SER/ARG-rich protein 34A |
0.84 | 0.3 | -0.33 | ||
52 | AT3G48930 | Nucleic acid-binding, OB-fold-like protein | embryo defective 1080 | 0.84 | 0.32 | -0.32 | ||
53 | AT5G35530 | Ribosomal protein S3 family protein | 0.84 | 0.29 | -0.31 | |||
54 | AT1G23290 | Ribosomal protein L18e/L15 superfamily protein | RIBOSOMAL PROTEIN L27A, RPL27AB | 0.84 | 0.32 | -0.32 | ||
55 | AT3G52580 | Ribosomal protein S11 family protein | 0.84 | 0.33 | -0.29 | |||
56 | AT1G07070 | Ribosomal protein L35Ae family protein | 0.84 | 0.33 | -0.3 | |||
57 | AT1G51510 | RNA-binding (RRM/RBD/RNP motifs) family protein | Y14 | 0.84 | 0.32 | -0.3 | ||
58 | AT1G22780 | Ribosomal protein S13/S18 family | POINTED FIRST LEAVES, POINTED FIRST LEAVES 1, 40S RIBOSOMAL PROTEIN S18 |
0.84 | 0.3 | -0.33 | ||
59 | AT3G16780 | Ribosomal protein L19e family protein | 0.84 | 0.31 | -0.31 | |||
60 | AT5G09510 | Ribosomal protein S19 family protein | 0.84 | 0.32 | -0.32 | |||
61 | AT3G11250 | Ribosomal protein L10 family protein | 0.84 | 0.32 | -0.31 | |||
62 | AT3G27080 | translocase of outer membrane 20 kDa subunit 3 | translocase of outer membrane 20 kDa subunit 3 |
0.84 | 0.3 | -0.34 | ||
63 | AT3G62940 | Cysteine proteinases superfamily protein | 0.84 | 0.31 | -0.32 | |||
64 | AT2G34480 | Ribosomal protein L18ae/LX family protein | 0.84 | 0.3 | -0.3 | |||
65 | AT5G11160 | adenine phosphoribosyltransferase 5 | adenine phosphoribosyltransferase 5 |
0.84 | 0.32 | -0.32 | ||
66 | AT1G14320 | Ribosomal protein L16p/L10e family protein | ribosomal protein L10, ribosomal protein L10 A, SUPPRESSOR OF ACAULIS 52 |
0.83 | 0.3 | -0.31 | ||
67 | AT2G36160 | Ribosomal protein S11 family protein | 0.83 | 0.31 | -0.32 | |||
68 | AT1G44835 | YbaK/aminoacyl-tRNA synthetase-associated domain | 0.83 | 0.31 | -0.33 | |||
69 | AT1G75560 | zinc knuckle (CCHC-type) family protein | 0.83 | 0.31 | -0.31 | |||
70 | AT3G61110 | ribosomal protein S27 | ribosomal protein S27, ribosomal protein S27 |
0.83 | 0.31 | -0.31 | ||
71 | AT5G56670 | Ribosomal protein S30 family protein | 0.83 | 0.31 | -0.33 | |||
72 | AT1G10590 | Nucleic acid-binding, OB-fold-like protein | 0.83 | 0.31 | -0.34 | |||
73 | AT1G72370 | 40s ribosomal protein SA | AP40, 40s ribosomal protein SA, RP40, RPSAA |
0.83 | 0.33 | -0.31 | ||
74 | AT3G59650 | mitochondrial ribosomal protein L51/S25/CI-B8 family protein |
0.83 | 0.32 | -0.32 | |||
75 | AT1G22920 | COP9 signalosome 5A | ARABIDOPSIS JAB1 HOMOLOG 1, COP9 signalosome 5A, JAB1 |
0.82 | 0.33 | -0.31 | ||
76 | AT4G31985 | Ribosomal protein L39 family protein | 0.82 | 0.31 | -0.32 | |||
77 | AT3G24740 | Protein of unknown function (DUF1644) | -0.82 | 0.3 | -0.32 | |||
78 | AT2G46230 | PIN domain-like family protein | 0.82 | 0.28 | -0.34 | |||
79 | AT2G45860 | unknown protein; Has 32 Blast hits to 32 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.82 | 0.31 | -0.32 | |||
80 | AT1G24510 | TCP-1/cpn60 chaperonin family protein | 0.82 | 0.32 | -0.32 | |||
81 | AT3G09500 | Ribosomal L29 family protein | 0.82 | 0.31 | -0.33 | |||
82 | AT3G18740 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | receptor-like kinase 902 | 0.82 | 0.31 | -0.31 | ||
83 | AT4G02230 | Ribosomal protein L19e family protein | 0.82 | 0.3 | -0.32 | |||
84 | AT3G49910 | Translation protein SH3-like family protein | 0.82 | 0.32 | -0.33 | |||
85 | AT3G52590 | ubiquitin extension protein 1 | EMBRYO DEFECTIVE 2167, EARLY-RESPONSIVE TO DEHYDRATION 16, HAPLESS 4, ubiquitin extension protein 1 |
0.82 | 0.31 | -0.32 | ||
86 | AT2G39990 | eukaryotic translation initiation factor 2 | Arabidopsis thaliana eukaryotic translation initiation factor 3 subunit F, eukaryotic translation initiation factor 2, eukaryotic translation initiation factor 3 subunit F |
0.82 | 0.3 | -0.31 | ||
87 | AT1G01940 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.82 | 0.33 | -0.32 | |||
88 | AT5G41970 | Metal-dependent protein hydrolase | 0.81 | 0.34 | -0.34 | |||
89 | AT1G71430 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 64 Blast hits to 64 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.81 | 0.31 | -0.31 | |||
90 | AT3G02220 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2039 (InterPro:IPR019351); Has 215 Blast hits to 215 proteins in 94 species: Archae - 2; Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). |
0.81 | 0.33 | -0.33 | |||
91 | AT4G38100 | unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.81 | 0.32 | -0.3 | |||
92 | AT3G43810 | calmodulin 7 | calmodulin 7 | 0.81 | 0.31 | -0.32 | ||
93 | AT5G03300 | adenosine kinase 2 | adenosine kinase 2 | 0.81 | 0.31 | -0.31 | ||
94 | AT3G03920 | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein | 0.81 | 0.31 | -0.34 | |||
95 | AT5G06360 | Ribosomal protein S8e family protein | 0.81 | 0.34 | -0.31 | |||
96 | AT1G48830 | Ribosomal protein S7e family protein | 0.81 | 0.3 | -0.32 | |||
97 | AT4G18040 | eukaryotic translation initiation factor 4E | ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITATION FACTOR 4E1, CUCUMOVIRUS MULTIPLICATION 1, eukaryotic translation initiation factor 4E, eukaryotic translation Initiation Factor 4E1 |
0.81 | 0.29 | -0.33 | ||
98 | AT3G51010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.81 | 0.31 | -0.33 | |||
99 | AT1G07370 | proliferating cellular nuclear antigen 1 | PROLIFERATING CELLULAR NUCLEAR ANTIGEN 1, proliferating cellular nuclear antigen 1 |
0.81 | 0.32 | -0.33 | ||
100 | AT2G19540 | Transducin family protein / WD-40 repeat family protein | 0.81 | 0.3 | -0.33 | |||
101 | AT1G73980 | Phosphoribulokinase / Uridine kinase family | -0.78 | 0.31 | -0.33 | |||
102 | AT3G49490 | unknown protein; Has 722 Blast hits to 186 proteins in 64 species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi - 48; Plants - 38; Viruses - 0; Other Eukaryotes - 534 (source: NCBI BLink). |
-0.78 | 0.32 | -0.33 | |||
103 | AT3G16940 | calmodulin binding;transcription regulators | -0.77 | 0.32 | -0.31 | |||
104 | AT5G64900 | precursor of peptide 1 | ARABIDOPSIS THALIANA PEPTIDE 1, PEPTIDE 1, precursor of peptide 1 |
-0.76 | 0.33 | -0.31 | ||
105 | AT2G26890 | DNAJ heat shock N-terminal domain-containing protein | GRAVITROPISM DEFECTIVE 2, KATAMARI2 |
-0.75 | 0.31 | -0.35 | ||
106 | AT5G22850 | Eukaryotic aspartyl protease family protein | -0.75 | 0.32 | -0.29 | |||
107 | AT2G40270 | Protein kinase family protein | -0.74 | 0.31 | -0.33 | |||
108 | AT1G03290 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast hits to 10183 proteins in 1114 species: Archae - 257; Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675; Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink). |
-0.74 | 0.31 | -0.33 | |||
109 | AT5G54730 | homolog of yeast autophagy 18 (ATG18) F | ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) F, homolog of yeast autophagy 18 (ATG18) F, homolog of yeast autophagy 18 (ATG18) F |
-0.73 | 0.32 | -0.29 | ||
110 | AT1G02310 | Glycosyl hydrolase superfamily protein | endo-beta-mannanase 1 | -0.73 | 0.31 | -0.32 | ||
111 | AT1G54710 | homolog of yeast autophagy 18 (ATG18) H | homolog of yeast autophagy 18 (ATG18) H, homolog of yeast autophagy 18 (ATG18) H |
-0.71 | 0.32 | -0.31 | ||
112 | AT1G26670 | Vesicle transport v-SNARE family protein | ATVTI12, VESICAL TRANSPORT V-SNARE 12, VTI1B |
-0.71 | 0.32 | -0.31 | ||
113 | AT1G62310 | transcription factor jumonji (jmjC) domain-containing protein |
-0.7 | 0.32 | -0.32 | |||
114 | AT4G11370 | RING-H2 finger A1A | RING-H2 finger A1A | -0.7 | 0.34 | -0.32 | ||
115 | AT5G35560 | DENN (AEX-3) domain-containing protein | -0.7 | 0.3 | -0.3 | |||
116 | AT1G50410 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
-0.69 | 0.31 | -0.31 | |||
117 | AT1G76460 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.68 | 0.31 | -0.3 | |||
118 | AT1G31480 | shoot gravitropism 2 (SGR2) | SHOOT GRAVITROPISM 2 | -0.68 | 0.3 | -0.32 | ||
119 | AT5G05570 | transducin family protein / WD-40 repeat family protein | -0.68 | 0.34 | -0.31 | |||
120 | AT4G26180 | Mitochondrial substrate carrier family protein | -0.68 | 0.33 | -0.32 | |||
121 | AT1G14790 | RNA-dependent RNA polymerase 1 | ATRDRP1, RNA-dependent RNA polymerase 1 |
-0.67 | 0.32 | -0.3 | ||
122 | AT1G51340 | MATE efflux family protein | -0.67 | 0.32 | -0.32 | |||
123 | AT2G31960 | glucan synthase-like 3 | glucan synthase-like 3, ATGSL3, GSL03, glucan synthase-like 3 |
-0.66 | 0.3 | -0.29 | ||
124 | AT4G29790 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink). |
-0.66 | 0.3 | -0.31 | |||
125 | AT1G24330 | ARM repeat superfamily protein | -0.66 | 0.31 | -0.31 | |||
126 | AT3G57300 | INO80 ortholog | INO80 ORTHOLOG, INO80 ortholog | -0.65 | 0.32 | -0.32 | ||
127 | AT4G32850 | nuclear poly(a) polymerase | nuclear poly(a) polymerase, poly(A) polymerase IV |
-0.65 | 0.3 | -0.32 | ||
128 | AT1G59640 | BIG PETAL P | BIG PETAL, BIG PETAL P, BIG PETAL UB, ZCW32 |
-0.65 | 0.32 | -0.32 | ||
129 | AT2G35050 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
-0.65 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
130 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
-0.76 | 0.31 | -0.34 | ||
131 | C0193 | Pantothenic acid | D,L-Pantothenic acid | Pantothenate | pantothenate biosynthesis | -0.73 | 0.47 | -0.43 | ||
132 | C0014 | O-Acetylserine | O-Acetyl-L-serine | O-Acetyl-L-serine | cysteine biosynthesis I, seleno-amino acid biosynthesis |
-0.71 | 0.31 | -0.32 | ||
133 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
-0.71 | 0.33 | -0.29 | ||
134 | C0054 | Agmatine | - | Agmatine | putrescine biosynthesis I, putrescine biosynthesis II, superpathway of polyamine biosynthesis |
-0.69 | 0.33 | -0.33 |