AT3G07670 : -
Query Information
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AGICode AT3G07670
Description Rubisco methyltransferase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G07670 Rubisco methyltransferase family protein 1 0.35 -0.3
2 AT2G46870 AP2/B3-like transcriptional factor family protein NGATHA1 0.88 0.32 -0.32
3 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.88 0.33 -0.31
4 AT4G10300 RmlC-like cupins superfamily protein 0.88 0.3 -0.32
5 AT1G31160 HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 HISTIDINE TRIAD NUCLEOTIDE-BINDING
2		 0.88 0.31 -0.32
6 AT2G39140 pseudouridine synthase family protein PIGMENT DEFECTIVE 328, SUPPRESSOR
OF VARIEGATION 1		 0.87 0.33 -0.3
7 AT2G35370 glycine decarboxylase complex H glycine decarboxylase complex H 0.87 0.3 -0.31
8 AT2G45770 signal recognition particle receptor protein, chloroplast
(FTSY)		 CPFTSY, FERRIC CHELATE REDUCTASE
DEFECTIVE 4		 0.86 0.31 -0.3
9 AT1G45474 photosystem I light harvesting complex gene 5 photosystem I light harvesting
complex gene 5		 0.86 0.34 -0.3
10 AT3G01660 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.85 0.3 -0.33
11 AT5G51100 Fe superoxide dismutase 2 Fe superoxide dismutase 2 0.85 0.29 -0.33
12 AT5G42310 Pentatricopeptide repeat (PPR-like) superfamily protein 0.84 0.32 -0.31
13 AT4G28030 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.84 0.32 -0.32
14 AT4G00180 Plant-specific transcription factor YABBY family protein YABBY3 0.84 0.33 -0.33
15 AT5G54180 plastid transcriptionally active 15 plastid transcriptionally active
15		 0.84 0.33 -0.32
16 AT2G31840 Thioredoxin superfamily protein Mesophyll-cell RNAi Library line
7-like		 0.83 0.29 -0.33
17 AT5G50250 chloroplast RNA-binding protein 31B chloroplast RNA-binding protein
31B		 0.83 0.32 -0.33
18 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.83 0.31 -0.32
19 AT4G25910 NFU domain protein 3 ATCNFU3, NFU domain protein 3 0.83 0.29 -0.34
20 AT5G55710 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast
thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Uncharacterised
conserved protein ycf60 (TAIR:AT2G47840.1); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 translocon at the inner envelope
membrane of chloroplasts 20-V,
translocon at the inner envelope
membrane of chloroplasts 20-V		 0.82 0.32 -0.31
21 AT3G52750 Tubulin/FtsZ family protein FTSZ2-2 0.82 0.31 -0.34
22 AT5G39830 Trypsin family protein with PDZ domain DEG8, DEG PROTEASE 8 0.82 0.31 -0.32
23 AT3G15690 Single hybrid motif superfamily protein 0.82 0.35 -0.3
24 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.82 0.33 -0.29
25 AT1G14240 GDA1/CD39 nucleoside phosphatase family protein -0.81 0.32 -0.32
26 AT3G49260 IQ-domain 21 IQ-domain 21 0.81 0.3 -0.28
27 AT1G20830 multiple chloroplast division site 1 MULTIPLE CHLOROPLAST DIVISION SITE
1		 0.81 0.31 -0.32
28 AT5G46800 Mitochondrial substrate carrier family protein A BOUT DE SOUFFLE 0.81 0.33 -0.33
29 AT3G52960 Thioredoxin superfamily protein 0.81 0.31 -0.32
30 AT2G26900 Sodium Bile acid symporter family bile acid:sodium symporter family
protein 2		 0.8 0.31 -0.32
31 AT5G44790 copper-exporting ATPase / responsive-to-antagonist 1 /
copper-transporting ATPase (RAN1)		 HMA7, RESPONSIVE-TO-ANTAGONIST 1 -0.8 0.32 -0.32
32 AT1G80770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 pigment defective 318 0.8 0.3 -0.32
33 AT2G26340 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast thylakoid
lumen, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38
proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.8 0.33 -0.32
34 AT4G18060 SH3 domain-containing protein 0.8 0.31 -0.3
35 AT1G80480 plastid transcriptionally active 17 plastid transcriptionally active
17		 0.8 0.35 -0.3
36 AT1G56190 Phosphoglycerate kinase family protein 0.8 0.31 -0.32
37 AT4G27700 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.8 0.29 -0.31
38 AT4G31530 NAD(P)-binding Rossmann-fold superfamily protein 0.8 0.32 -0.3
39 AT3G49900 Phototropic-responsive NPH3 family protein 0.8 0.32 -0.32
40 AT3G10840 alpha/beta-Hydrolases superfamily protein 0.79 0.33 -0.31
41 AT4G09620 Mitochondrial transcription termination factor family
protein		 0.79 0.31 -0.31
42 AT1G74850 plastid transcriptionally active 2 PIGMENT DEFECTIVE 343, plastid
transcriptionally active 2		 0.79 0.31 -0.33
43 AT2G01110 Sec-independent periplasmic protein translocase ALBINO AND PALE GREEN 2, PGA2,
TWIN-ARGININE TRANSLOCATION C,
unfertilized embryo sac 3		 0.79 0.32 -0.31
44 AT2G39110 Protein kinase superfamily protein -0.76 0.31 -0.33
45 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 -0.76 0.31 -0.3
46 AT4G12080 AT-hook motif nuclear-localized protein 1 AT-hook motif nuclear-localized
protein 1, ATAHL1		 -0.75 0.32 -0.3
47 AT5G51500 Plant invertase/pectin methylesterase inhibitor superfamily -0.75 0.3 -0.34
48 AT1G70300 K+ uptake permease 6 K+ uptake permease 6 -0.75 0.31 -0.3
49 AT5G24290 Vacuolar iron transporter (VIT) family protein -0.75 0.29 -0.32
50 AT5G63930 Leucine-rich repeat protein kinase family protein -0.75 0.3 -0.3
51 AT4G34600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: pollen tube growth; LOCATED IN: endomembrane
system; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: M germinated pollen stage, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G16385.1); Has 17 Blast hits to 17
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.74 0.33 -0.3
52 AT3G16460 Mannose-binding lectin superfamily protein jacalin-related lectin 34 -0.74 0.31 -0.32
53 AT3G16450 Mannose-binding lectin superfamily protein Jacalin-related lectin 33 -0.73 0.32 -0.32
54 AT2G34500 cytochrome P450, family 710, subfamily A, polypeptide 1 cytochrome P450, family 710,
subfamily A, polypeptide 1		 -0.73 0.31 -0.32
55 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.72 0.32 -0.29
56 AT2G17520 Endoribonuclease/protein kinase IRE1-like ARABIDOPSIS THALIANA INOSITOL
REQUIRING 1-2, INOSITOL REQUIRING
1-2, IRE1A		 -0.72 0.33 -0.31
57 AT5G24600 Protein of unknown function, DUF599 -0.72 0.32 -0.3
58 AT3G03520 non-specific phospholipase C3 non-specific phospholipase C3 -0.72 0.3 -0.31
59 AT1G61820 beta glucosidase 46 beta glucosidase 46 -0.71 0.33 -0.3
60 AT5G14180 Myzus persicae-induced lipase 1 Myzus persicae-induced lipase 1 -0.71 0.3 -0.31
61 AT3G21240 4-coumarate:CoA ligase 2 4-coumarate:CoA ligase 2, AT4CL2 -0.71 0.32 -0.32
62 AT5G06300 Putative lysine decarboxylase family protein LONELY GUY 7 -0.7 0.31 -0.32
63 AT5G65660 hydroxyproline-rich glycoprotein family protein -0.7 0.33 -0.31
64 AT5G48940 Leucine-rich repeat transmembrane protein kinase family
protein		 -0.69 0.32 -0.31
65 AT1G33750 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.69 0.31 -0.34
66 AT3G21770 Peroxidase superfamily protein -0.69 0.33 -0.3
67 AT1G15210 pleiotropic drug resistance 7 ATP-binding cassette G35,
PLEIOTROPIC DRUG RESISTANCE 7,
pleiotropic drug resistance 7		 -0.69 0.29 -0.31
68 AT1G22440 Zinc-binding alcohol dehydrogenase family protein -0.69 0.29 -0.31
69 AT4G20210 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.69 0.3 -0.31
70 AT1G23120 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.31 -0.31
71 AT1G31950 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.68 0.31 -0.28
72 AT2G45290 Transketolase -0.68 0.31 -0.33
73 AT3G19200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits
to 51 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.33 -0.29
74 AT1G23850 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits
to 40 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.3
75 AT3G61850 Dof-type zinc finger DNA-binding family protein dof affecting germination 1 -0.67 0.32 -0.33
76 AT5G05640 nucleoprotein-related -0.67 0.32 -0.31
77 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1		 -0.67 0.33 -0.29
78 AT5G05900 UDP-Glycosyltransferase superfamily protein -0.67 0.32 -0.31
79 AT3G24240 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.66 0.32 -0.31
80 AT5G19520 mechanosensitive channel of small conductance-like 9 ATMSL9, mechanosensitive channel
of small conductance-like 9		 -0.66 0.31 -0.32
81 AT2G01880 purple acid phosphatase 7 PURPLE ACID PHOSPHATASE 7, purple
acid phosphatase 7		 -0.66 0.3 -0.33
82 AT4G13235 embryo sac development arrest 21 embryo sac development arrest 21 -0.66 0.29 -0.3
83 AT3G15300 VQ motif-containing protein -0.66 0.31 -0.33
84 AT4G22610 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.66 0.33 -0.32
85 AT5G53990 UDP-Glycosyltransferase superfamily protein -0.66 0.33 -0.32
86 AT3G15950 DNA topoisomerase-related NAI2 -0.65 0.32 -0.31
87 AT1G05260 Peroxidase superfamily protein RARE COLD INDUCIBLE GENE 3, RCI3A -0.65 0.31 -0.32
88 AT1G24430 HXXXD-type acyl-transferase family protein -0.65 0.32 -0.32
89 AT5G59560 sensitivity to red light reduced protein (SRR1) SENSITIVITY TO RED LIGHT REDUCED 1 -0.65 0.34 -0.31
90 AT1G23560 Domain of unknown function (DUF220) -0.64 0.31 -0.33
91 AT1G48510 Surfeit locus 1 cytochrome c oxidase biogenesis protein -0.64 0.32 -0.29
92 AT2G17550 unknown protein; Has 264 Blast hits to 258 proteins in 65
species: Archae - 5; Bacteria - 5; Metazoa - 66; Fungi -
16; Plants - 107; Viruses - 0; Other Eukaryotes - 65
(source: NCBI BLink).		 -0.64 0.3 -0.31
93 AT2G22930 UDP-Glycosyltransferase superfamily protein -0.64 0.34 -0.31
94 AT5G42590 cytochrome P450, family 71, subfamily A, polypeptide 16 cytochrome P450, family 71,
subfamily A, polypeptide 16,
marneral oxidase		 -0.64 0.31 -0.31
95 AT2G32300 uclacyanin 1 uclacyanin 1 -0.64 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
96 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		-0.64 0.33 -0.33 C0008