AT3G01180 : starch synthase 2
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G01180
Description starch synthase 2
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 1 0.31 -0.3
2 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 0.79 0.31 -0.33
3 AT4G37270 heavy metal atpase 1 ARABIDOPSIS THALIANA HEAVY METAL
ATPASE 1, heavy metal atpase 1		 0.78 0.31 -0.31
4 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 0.77 0.33 -0.31
5 AT3G56140 Protein of unknown function (DUF399 and DUF3411) 0.77 0.34 -0.33
6 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.32 -0.33
7 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG		 0.75 0.31 -0.32
8 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 0.74 0.33 -0.3
9 AT1G77930 Chaperone DnaJ-domain superfamily protein 0.74 0.32 -0.3
10 AT1G04870 protein arginine methyltransferase 10 ATPRMT10, protein arginine
methyltransferase 10		 -0.74 0.31 -0.32
11 AT2G45990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 312
Blast hits to 312 proteins in 90 species: Archae - 0;
Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.74 0.33 -0.32
12 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.73 0.3 -0.32
13 AT3G02830 zinc finger protein 1 zinc finger protein 1 0.73 0.31 -0.3
14 AT4G26850 mannose-1-phosphate guanylyltransferase
(GDP)s;GDP-galactose:mannose-1-phosphate
guanylyltransferases;GDP-galactose:glucose-1-phosphate
guanylyltransferases;GDP-galactose:myoinositol-1-phosphate
guanylyltransferases;glucose-1-phosphate
guanylyltransferase		 vitamin c defective 2 0.73 0.33 -0.31
15 AT3G26085 CAAX amino terminal protease family protein 0.72 0.29 -0.31
16 AT3G46980 phosphate transporter 4;3 phosphate transporter 4;3 0.72 0.33 -0.31
17 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 0.71 0.32 -0.3
18 AT3G26580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.32 -0.33
19 AT5G58200 Calcineurin-like metallo-phosphoesterase superfamily
protein		 0.71 0.34 -0.3
20 AT2G21340 MATE efflux family protein 0.71 0.31 -0.3
21 AT5G24660 response to low sulfur 2 RESPONSE TO LOW SULFUR 2 0.71 0.33 -0.3
22 AT2G41810 Protein of unknown function, DUF642 -0.71 0.31 -0.32
23 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 -0.7 0.31 -0.31
24 AT3G23830 glycine-rich RNA-binding protein 4 AtGRP4, GR-RBP4, glycine-rich
RNA-binding protein 4		 -0.7 0.3 -0.35
25 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.32 -0.34
26 AT2G46580 Pyridoxamine 5'-phosphate oxidase family protein 0.7 0.31 -0.31
27 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 0.7 0.31 -0.33
28 AT1G50440 RING/FYVE/PHD zinc finger superfamily protein 0.69 0.33 -0.33
29 AT2G45430 AT-hook motif nuclear-localized protein 22 AT-hook motif nuclear-localized
protein 22		 -0.69 0.32 -0.32
30 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.69 0.32 -0.33
31 AT5G09700 Glycosyl hydrolase family protein -0.69 0.31 -0.32
32 AT4G09340 SPla/RYanodine receptor (SPRY) domain-containing protein 0.69 0.31 -0.32
33 AT2G36290 alpha/beta-Hydrolases superfamily protein -0.69 0.32 -0.3
34 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein -0.69 0.32 -0.3
35 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.68 0.31 -0.33
36 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.68 0.31 -0.32
37 AT1G30160 Protein of unknown function (DUF295) 0.68 0.3 -0.3
38 AT5G40200 DegP protease 9 DegP protease 9 -0.68 0.32 -0.3
39 AT1G28320 protease-related DEG15 0.68 0.32 -0.35
40 AT1G73170 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.68 0.31 -0.31
41 AT1G17360 BEST Arabidopsis thaliana protein match is:
COP1-interacting protein-related (TAIR:AT1G72410.1); Has
9949 Blast hits to 7480 proteins in 576 species: Archae -
12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants -
444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI
BLink).		 0.68 0.29 -0.33
42 AT5G28640 SSXT family protein ANGUSTIFOLIA 3, ARABIDOPSIS
GRF1-INTERACTING FACTOR 1,
GRF1-INTERACTING FACTOR,
GRF1-INTERACTING FACTOR 1		 -0.68 0.29 -0.3
43 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.68 0.3 -0.31
44 AT4G02120 CTP synthase family protein 0.67 0.33 -0.31
45 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 0.67 0.33 -0.32
46 AT3G56900 Transducin/WD40 repeat-like superfamily protein -0.67 0.3 -0.32
47 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.67 0.32 -0.3
48 AT3G19900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3067 (InterPro:IPR021420);
Has 276 Blast hits to 276 proteins in 83 species: Archae -
0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59;
Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).		 0.67 0.33 -0.33
49 AT4G26630 DEK domain-containing chromatin associated protein 0.67 0.31 -0.31
50 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 -0.67 0.3 -0.33
51 AT2G44530 Phosphoribosyltransferase family protein 0.67 0.31 -0.32
52 AT1G80680 SUPPRESSOR OF AUXIN RESISTANCE 3 MODIFIER OF SNC1,3, NUP96,
PRECOCIOUS, SUPPRESSOR OF AUXIN
RESISTANCE 3		 -0.67 0.34 -0.32
53 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 -0.67 0.34 -0.31
54 AT5G59380 methyl-CPG-binding domain 6 ATMBD6, methyl-CPG-binding domain
6		 -0.66 0.32 -0.31
55 AT1G07010 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtSLP1, Shewenella-like protein
phosphatase 1		 0.66 0.32 -0.32
56 AT4G11240 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP7 -0.66 0.32 -0.32
57 AT4G33100 CONTAINS InterPro DOMAIN/s: Mitochondrial
distribution/morphology family 35/apoptosis
(InterPro:IPR007918); Has 214 Blast hits to 214 proteins in
102 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi
- 69; Plants - 29; Viruses - 0; Other Eukaryotes - 6
(source: NCBI BLink).		 -0.66 0.32 -0.31
58 AT1G78200 Protein phosphatase 2C family protein 0.66 0.3 -0.32
59 AT5G50160 ferric reduction oxidase 8 FERRIC REDUCTION OXIDASE 8, ferric
reduction oxidase 8		 0.66 0.3 -0.32
60 AT4G39550 Galactose oxidase/kelch repeat superfamily protein -0.66 0.31 -0.31
61 AT5G15550 Transducin/WD40 repeat-like superfamily protein -0.66 0.32 -0.31
62 AT1G50580 UDP-Glycosyltransferase superfamily protein -0.66 0.32 -0.3
63 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 0.65 0.31 -0.3
64 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 0.65 0.33 -0.32
65 AT1G07830 ribosomal protein L29 family protein -0.65 0.32 -0.32
66 AT5G04920 EAP30/Vps36 family protein 0.65 0.31 -0.31
67 AT3G48100 response regulator 5 response regulator 5, ARABIDOPSIS
THALIANA RESPONSE REGULATOR 2,
INDUCED BY CYTOKININ 6, response
regulator 5		 -0.65 0.31 -0.3
68 AT5G12410 THUMP domain-containing protein -0.65 0.32 -0.33
69 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 0.65 0.32 -0.33
70 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein -0.65 0.31 -0.32
71 AT5G56270 WRKY DNA-binding protein 2 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 2, WRKY
DNA-binding protein 2		 0.65 0.31 -0.32
72 AT1G17600 Disease resistance protein (TIR-NBS-LRR class) family 0.65 0.32 -0.34
73 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 -0.65 0.31 -0.31
74 AT1G04250 AUX/IAA transcriptional regulator family protein AUXIN RESISTANT 3, indole-3-acetic
acid inducible 17		 -0.65 0.31 -0.32
75 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 0.64 0.32 -0.32
76 AT2G19990 pathogenesis-related protein-1-like pathogenesis-related
protein-1-like		 -0.64 0.32 -0.31
77 AT2G28450 zinc finger (CCCH-type) family protein -0.64 0.31 -0.29
78 AT3G55130 white-brown complex homolog 19 ATP-binding cassette G19,
white-brown complex homolog 19,
white-brown complex homolog 19		 0.64 0.31 -0.34
79 AT1G53230 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
3		 TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 3		 0.64 0.33 -0.3
80 AT5G10130 Pollen Ole e 1 allergen and extensin family protein -0.64 0.32 -0.33
81 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 0.64 0.3 -0.31
82 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.64 0.33 -0.34
83 AT2G32160 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.64 0.3 -0.32
84 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 0.63 0.31 -0.33
85 AT5G24655 response to low sulfur 4 RESPONSE TO LOW SULFUR 4 0.63 0.35 -0.31
86 AT1G78100 F-box family protein auxin up-regulated f-box protein 1 -0.63 0.3 -0.33
87 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.63 0.32 -0.34
88 AT4G18130 phytochrome E phytochrome E 0.63 0.31 -0.31
89 AT2G23060 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.63 0.3 -0.29
90 AT5G13020 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing
protein		 AtEML3, EMSY-like 3 0.62 0.29 -0.31
91 AT5G11350 DNAse I-like superfamily protein 0.62 0.33 -0.31
92 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 -0.62 0.32 -0.31
93 AT3G50620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.62 0.33 -0.32
94 AT5G61290 Flavin-binding monooxygenase family protein 0.62 0.31 -0.32
95 AT1G79470 Aldolase-type TIM barrel family protein -0.62 0.3 -0.32
96 AT1G10590 Nucleic acid-binding, OB-fold-like protein -0.62 0.31 -0.32
97 AT1G75340 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.62 0.31 -0.3
98 AT3G18200 nodulin MtN21 /EamA-like transporter family protein -0.62 0.34 -0.35
99 AT1G27690 Protein of unknown function (DUF620) 0.62 0.3 -0.32
100 AT2G47140 NAD(P)-binding Rossmann-fold superfamily protein AtSDR5, short-chain dehydrogenase
reductase 5		 -0.62 0.3 -0.31
101 AT2G01680 Ankyrin repeat family protein 0.61 0.3 -0.33
102 AT5G10580 Protein of unknown function, DUF599 -0.61 0.32 -0.32
103 AT3G53570 FUS3-complementing gene 1 FUS3-complementing gene 1, AME2,
FUS3-complementing gene 1		 0.61 0.32 -0.31
104 AT1G56020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G12970.1); Has 3011 Blast hits
to 958 proteins in 192 species: Archae - 0; Bacteria - 193;
Metazoa - 479; Fungi - 286; Plants - 158; Viruses - 8;
Other Eukaryotes - 1887 (source: NCBI BLink).		 -0.61 0.31 -0.31
105 AT2G32070 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.61 0.34 -0.31
106 AT1G18450 actin-related protein 4 actin-related protein 4,
actin-related protein 4		 -0.61 0.3 -0.31
107 AT5G18560 Integrase-type DNA-binding superfamily protein PUCHI -0.61 0.32 -0.32
108 AT1G74500 activation-tagged BRI1(brassinosteroid-insensitive
1)-suppressor 1		 activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, TARGET OF
MONOPTEROS 7		 -0.61 0.3 -0.32
109 AT3G14600 Ribosomal protein L18ae/LX family protein -0.6 0.3 -0.32
110 AT2G26770 plectin-related stomatal closure-related actin
binding protein 1		 0.6 0.33 -0.33
111 AT5G58390 Peroxidase superfamily protein 0.6 0.31 -0.3
112 AT4G30630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits
to 33 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.32
113 AT1G54260 winged-helix DNA-binding transcription factor family
protein		 0.6 0.3 -0.31
114 AT3G49060 U-box domain-containing protein kinase family protein 0.6 0.32 -0.3
115 AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxin (pyrodoxamine)
5'-phosphate oxidase, HOMOLOG OF
YEAST PYRIDOXINE AUXOTROPHY 3,
pyridoxin (pyrodoxamine)
5'-phosphate oxidase		 0.6 0.33 -0.31
116 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A -0.6 0.32 -0.31
117 AT5G13520 peptidase M1 family protein -0.6 0.33 -0.32
118 AT1G79830 golgin candidate 5 golgin candidate 5 0.6 0.33 -0.31
119 AT3G11670 UDP-Glycosyltransferase superfamily protein DIGALACTOSYL DIACYLGLYCEROL
DEFICIENT 1		 0.6 0.32 -0.3
120 AT1G59520 CW7 CW7 0.6 0.31 -0.31
121 AT1G16060 ARIA-interacting double AP2 domain protein ARIA-interacting double AP2 domain
protein		 -0.6 0.32 -0.33
122 AT3G55720 Protein of unknown function (DUF620) -0.6 0.33 -0.3
123 AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family
protein		 -0.6 0.32 -0.34
124 AT2G25980 Mannose-binding lectin superfamily protein -0.6 0.32 -0.31
125 AT1G13670 unknown protein; Has 22 Blast hits to 22 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.32 -0.3
126 AT2G14960 Auxin-responsive GH3 family protein GH3.1 -0.59 0.31 -0.35
127 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.59 0.3 -0.33
128 AT5G66280 GDP-D-mannose 4,6-dehydratase 1 GDP-D-mannose 4,6-dehydratase 1 -0.59 0.32 -0.34
129 AT3G07750 3'-5'-exoribonuclease family protein -0.59 0.31 -0.31
130 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.31
131 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.59 0.28 -0.33
132 AT2G04800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl, root;
Has 4 Blast hits to 4 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.3 -0.3
133 AT1G68120 basic pentacysteine 3 ATBPC3, basic pentacysteine 3 -0.58 0.33 -0.3
134 AT3G50300 HXXXD-type acyl-transferase family protein -0.58 0.29 -0.32
135 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.58 0.31 -0.31
136 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.58 0.3 -0.31
137 AT5G20950 Glycosyl hydrolase family protein -0.58 0.31 -0.31
138 AT3G23090 TPX2 (targeting protein for Xklp2) protein family -0.58 0.31 -0.3
139 AT1G67760 TCP-1/cpn60 chaperonin family protein -0.58 0.33 -0.32
140 AT5G63660 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
74, PDF2.5		 -0.58 0.31 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
141 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		0.66 0.44 -0.45 C0210
142 C0196 Phosphatidylcholine-34:3 - Phosphatidylcholine-34:3 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		0.6 0.44 -0.47 C0196