AT3G01160 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G01160
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUC153 (InterPro:IPR012580); Has 36638 Blast hits to 21323 proteins in 1057 species: Archae - 109; Bacteria - 2369; Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses - 489; Other Eukaryotes - 13360 (source: NCBI BLink).
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G01160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, nucleus;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NUC153
(InterPro:IPR012580); Has 36638 Blast hits to 21323
proteins in 1057 species: Archae - 109; Bacteria - 2369;
Metazoa - 13796; Fungi - 4858; Plants - 1657; Viruses -
489; Other Eukaryotes - 13360 (source: NCBI BLink).		 1 0.29 -0.32
2 AT1G56110 homolog of nucleolar protein NOP56 homolog of nucleolar protein NOP56 0.84 0.33 -0.3
3 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.83 0.3 -0.32
4 AT3G57000 nucleolar essential protein-related 0.82 0.3 -0.3
5 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c -0.82 0.32 -0.31
6 AT3G44850 Protein kinase superfamily protein 0.82 0.32 -0.32
7 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.82 0.35 -0.29
8 AT5G60990 DEA(D/H)-box RNA helicase family protein 0.81 0.3 -0.32
9 AT1G54380 spliceosome protein-related 0.81 0.29 -0.33
10 AT2G34780 maternal effect embryo arrest 22 EMBRYO DEFECTIVE 1611, MATERNAL
EFFECT EMBRYO ARREST 22		 0.81 0.32 -0.3
11 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 0.8 0.31 -0.31
12 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.79 0.31 -0.3
13 AT5G04040 Patatin-like phospholipase family protein SUGAR-DEPENDENT1 -0.79 0.33 -0.29
14 AT4G30840 Transducin/WD40 repeat-like superfamily protein 0.79 0.31 -0.32
15 AT3G56090 ferritin 3 ferritin 3, ferritin 3 0.79 0.31 -0.34
16 AT3G15080 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.78 0.32 -0.33
17 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.77 0.3 -0.31
18 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 0.77 0.3 -0.32
19 AT1G36380 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 15 growth
stages; Has 14 Blast hits to 14 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.77 0.33 -0.32
20 AT3G15460 Ribosomal RNA processing Brix domain protein 0.77 0.28 -0.33
21 AT5G41670 6-phosphogluconate dehydrogenase family protein 0.77 0.31 -0.31
22 AT2G21790 ribonucleotide reductase 1 RIBONUCLEOTIDE REDUCTASE LARGE
SUBUNIT 1, CRINKLY LEAVES 8,
RIBONUCLEOTIDE REDUCTASE 1,
ribonucleotide reductase 1		 0.77 0.29 -0.3
23 AT4G25340 FK506 BINDING PROTEIN 53 ATFKBP53, FK506 BINDING PROTEIN 53 0.77 0.28 -0.31
24 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 0.76 0.3 -0.34
25 AT3G57150 homologue of NAP57 AtCBF5, AtNAP57, CBF5, homologue
of NAP57		 0.76 0.32 -0.32
26 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.76 0.31 -0.32
27 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.76 0.31 -0.29
28 AT4G32720 La protein 1 La protein 1, La protein 1 0.76 0.33 -0.32
29 AT4G18140 SCP1-like small phosphatase 4b SCP1-like small phosphatase 4b -0.75 0.3 -0.33
30 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.75 0.33 -0.31
31 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.31 -0.32
32 AT1G69950 transposable element gene 0.75 0.32 -0.31
33 AT1G18800 NAP1-related protein 2 NAP1-related protein 2 0.75 0.29 -0.31
34 AT3G20240 Mitochondrial substrate carrier family protein 0.75 0.32 -0.3
35 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 0.74 0.31 -0.29
36 AT2G47710 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.74 0.3 -0.3
37 AT5G19920 Transducin/WD40 repeat-like superfamily protein 0.74 0.29 -0.3
38 AT3G58510 DEA(D/H)-box RNA helicase family protein 0.74 0.32 -0.31
39 AT4G30890 ubiquitin-specific protease 24 ubiquitin-specific protease 24 0.74 0.3 -0.3
40 AT4G38710 glycine-rich protein 0.74 0.33 -0.33
41 AT5G57900 SKP1 interacting partner 1 SKP1 interacting partner 1 -0.74 0.32 -0.33
42 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.74 0.31 -0.32
43 AT3G58170 BET1P/SFT1P-like protein 14A ATBET11, ARABIDOPSIS THALIANA
BET1P/SFT1P-LIKE PROTEIN 14A,
BET11, BET1P/SFT1P-like protein
14A		 -0.74 0.29 -0.3
44 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.31 -0.31
45 AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein 0.73 0.32 -0.33
46 AT5G58370 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.73 0.33 -0.32
47 AT3G07350 Protein of unknown function (DUF506) -0.73 0.33 -0.29
48 AT1G13030 sphere organelles protein-related 0.73 0.33 -0.32
49 AT1G27880 DEAD/DEAH box RNA helicase family protein 0.73 0.33 -0.3
50 AT5G47455 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 8 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast
hits to 147 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.72 0.35 -0.33
51 AT3G27420 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.72 0.29 -0.31
52 AT2G25680 molybdate transporter 1 molybdate transporter 1 0.72 0.34 -0.32
53 AT5G57815 Cytochrome c oxidase, subunit Vib family protein -0.72 0.31 -0.3
54 AT3G06780 glycine-rich protein -0.72 0.3 -0.31
55 AT4G27990 YGGT family protein ATYLMG1-2, YLMG1-2 -0.72 0.31 -0.32
56 AT2G37560 origin recognition complex second largest subunit 2 ORIGIN RECOGNITION COMPLEX SECOND
LARGEST SUBUNIT 2, origin
recognition complex second largest
subunit 2		 0.72 0.36 -0.32
57 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.3 -0.3
58 AT1G07230 non-specific phospholipase C1 non-specific phospholipase C1 -0.7 0.33 -0.32
59 AT5G27840 Calcineurin-like metallo-phosphoesterase superfamily
protein		 TOPP8 -0.7 0.33 -0.32
60 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.69 0.32 -0.34
61 AT1G27290 unknown protein; Has 44 Blast hits to 44 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.31 -0.32
62 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.33 -0.31
63 AT2G22690 zinc ion binding -0.69 0.32 -0.34
64 AT1G03610 Protein of unknown function (DUF789) -0.69 0.3 -0.32
65 AT5G10960 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.69 0.3 -0.31
66 AT3G23690 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.69 0.31 -0.31
67 AT1G10150 Carbohydrate-binding protein -0.68 0.3 -0.33
68 AT4G38810 Calcium-binding EF-hand family protein -0.68 0.3 -0.3
69 AT1G55000 peptidoglycan-binding LysM domain-containing protein -0.68 0.3 -0.3
70 AT3G54390 sequence-specific DNA binding transcription factors -0.68 0.32 -0.31
71 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 -0.68 0.32 -0.3
72 AT2G21560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits
to 2305 proteins in 270 species: Archae - 0; Bacteria -
156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses -
6; Other Eukaryotes - 1879 (source: NCBI BLink).		 -0.67 0.34 -0.29
73 AT2G18670 RING/U-box superfamily protein -0.67 0.32 -0.3
74 AT5G16120 alpha/beta-Hydrolases superfamily protein -0.67 0.32 -0.31
75 AT3G10210 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.66 0.32 -0.31
76 AT5G19860 Protein of unknown function, DUF538 -0.66 0.33 -0.33
77 AT2G30540 Thioredoxin superfamily protein -0.66 0.31 -0.33
78 AT5G19120 Eukaryotic aspartyl protease family protein -0.65 0.32 -0.32
79 AT4G12410 SAUR-like auxin-responsive protein family -0.65 0.33 -0.36
80 AT3G15070 RING/U-box superfamily protein -0.65 0.32 -0.32
81 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE -0.65 0.3 -0.32