AGICode | AT3G11450 |
Description | DnaJ domain ;Myb-like DNA-binding domain |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G11450 | DnaJ domain ;Myb-like DNA-binding domain | 1 | 0.28 | -0.31 | |||
2 | AT1G06900 | Insulinase (Peptidase family M16) family protein | 0.83 | 0.3 | -0.33 | |||
3 | AT1G49540 | elongator protein 2 | Elongator subunit 2, elongator protein 2 |
0.82 | 0.33 | -0.31 | ||
4 | AT3G13460 | evolutionarily conserved C-terminal region 2 | evolutionarily conserved C-terminal region 2 |
0.82 | 0.32 | -0.31 | ||
5 | AT2G40360 | Transducin/WD40 repeat-like superfamily protein | 0.82 | 0.3 | -0.32 | |||
6 | AT1G29940 | nuclear RNA polymerase A2 | nuclear RNA polymerase A2 | 0.81 | 0.31 | -0.31 | ||
7 | AT5G16750 | Transducin family protein / WD-40 repeat family protein | TORMOZEMBRYO DEFECTIVE | 0.8 | 0.31 | -0.33 | ||
8 | AT5G64420 | DNA polymerase V family | 0.79 | 0.34 | -0.31 | |||
9 | AT1G15440 | periodic tryptophan protein 2 | (PERIODIC TRYPTOPHAN PROTEIN 2, periodic tryptophan protein 2 |
0.79 | 0.29 | -0.32 | ||
10 | AT1G04945 | HIT-type Zinc finger family protein | 0.79 | 0.3 | -0.33 | |||
11 | AT1G53200 | unknown protein; Has 21 Blast hits to 21 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.79 | 0.31 | -0.32 | |||
12 | AT1G59760 | RNA helicase, ATP-dependent, SK12/DOB1 protein | AtMTR4, homolog of yeast MTR4 | 0.77 | 0.32 | -0.32 | ||
13 | AT5G06110 | DnaJ domain ;Myb-like DNA-binding domain | 0.77 | 0.3 | -0.35 | |||
14 | AT4G13750 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
EMBRYO DEFECTIVE 2597, NO VEIN | 0.76 | 0.31 | -0.31 | ||
15 | AT3G22980 | Ribosomal protein S5/Elongation factor G/III/V family protein |
0.76 | 0.3 | -0.31 | |||
16 | AT1G19520 | pentatricopeptide (PPR) repeat-containing protein | NUCLEAR FUSION DEFECTIVE 5 | 0.75 | 0.32 | -0.3 | ||
17 | AT1G14300 | ARM repeat superfamily protein | 0.75 | 0.31 | -0.31 | |||
18 | AT2G34750 | RNA polymerase I specific transcription initiation factor RRN3 protein |
0.75 | 0.32 | -0.29 | |||
19 | AT2G41870 | Remorin family protein | -0.75 | 0.32 | -0.32 | |||
20 | AT1G06720 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.75 | 0.33 | -0.3 | |||
21 | AT3G44330 | INVOLVED IN: protein processing; LOCATED IN: mitochondrion, endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nicalin (InterPro:IPR016574), EF-Hand 1, calcium-binding site (InterPro:IPR018247), Nicastrin (InterPro:IPR008710); Has 245 Blast hits to 243 proteins in 99 species: Archae - 6; Bacteria - 10; Metazoa - 139; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). |
0.75 | 0.3 | -0.31 | |||
22 | AT5G03170 | FASCICLIN-like arabinogalactan-protein 11 | ARABIDOPSIS FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 11, FASCICLIN-like arabinogalactan-protein 11 |
-0.75 | 0.32 | -0.3 | ||
23 | AT3G26782 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.74 | 0.31 | -0.31 | |||
24 | AT3G52140 | tetratricopeptide repeat (TPR)-containing protein | 0.74 | 0.33 | -0.34 | |||
25 | AT5G60960 | Pentatricopeptide repeat (PPR) superfamily protein | PPR protein localized to the nucleus and mitochondria 1 |
0.74 | 0.32 | -0.31 | ||
26 | AT3G24080 | KRR1 family protein | 0.74 | 0.3 | -0.3 | |||
27 | AT1G51380 | DEA(D/H)-box RNA helicase family protein | 0.73 | 0.31 | -0.3 | |||
28 | AT5G62190 | DEAD box RNA helicase (PRH75) | PRH75 | 0.73 | 0.3 | -0.32 | ||
29 | AT3G07660 | Kinase-related protein of unknown function (DUF1296) | 0.73 | 0.3 | -0.31 | |||
30 | AT1G61640 | Protein kinase superfamily protein | 0.73 | 0.3 | -0.31 | |||
31 | AT4G12750 | Homeodomain-like transcriptional regulator | 0.72 | 0.33 | -0.31 | |||
32 | AT2G28450 | zinc finger (CCCH-type) family protein | 0.72 | 0.32 | -0.33 | |||
33 | AT4G31160 | DDB1-CUL4 associated factor 1 | DDB1-CUL4 associated factor 1 | 0.72 | 0.32 | -0.32 | ||
34 | AT1G61040 | plus-3 domain-containing protein | vernalization independence 5 | 0.71 | 0.33 | -0.32 | ||
35 | AT2G36930 | zinc finger (C2H2 type) family protein | 0.71 | 0.3 | -0.32 | |||
36 | AT5G36950 | DegP protease 10 | DegP protease 10 | 0.71 | 0.29 | -0.31 | ||
37 | AT3G28760 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 390 Blast hits to 390 proteins in 131 species: Archae - 144; Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). |
-0.71 | 0.3 | -0.32 | |||
38 | AT5G42540 | exoribonuclease 2 | EXORIBONUCLEASE 2, exoribonuclease 2 |
0.71 | 0.31 | -0.3 | ||
39 | AT1G24764 | microtubule-associated proteins 70-2 | microtubule-associated proteins 70-2, microtubule-associated proteins 70-2 |
-0.71 | 0.31 | -0.31 | ||
40 | AT2G01270 | quiescin-sulfhydryl oxidase 2 | quiescin-sulfhydryl oxidase 2, quiescin-sulfhydryl oxidase 2 |
0.71 | 0.31 | -0.3 | ||
41 | AT3G11830 | TCP-1/cpn60 chaperonin family protein | 0.71 | 0.3 | -0.32 | |||
42 | AT5G14450 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.7 | 0.32 | -0.3 | |||
43 | AT4G33580 | beta carbonic anhydrase 5 | A. THALIANA BETA CARBONIC ANHYDRASE 5, beta carbonic anhydrase 5 |
-0.7 | 0.31 | -0.32 | ||
44 | AT5G04490 | vitamin E pathway gene 5 | vitamin E pathway gene 5 | -0.7 | 0.31 | -0.3 | ||
45 | AT5G35910 | Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain |
0.7 | 0.31 | -0.31 | |||
46 | AT5G37680 | ADP-ribosylation factor-like A1A | ADP-ribosylation factor-like A1A, ADP-ribosylation factor-like A1A |
-0.7 | 0.32 | -0.31 | ||
47 | AT4G38440 | LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II-associated protein 1, C-terminal (InterPro:IPR013929), RNA polymerase II-associated protein 1, N-terminal (InterPro:IPR013930); Has 276 Blast hits to 220 proteins in 102 species: Archae - 0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
MINIYO | 0.69 | 0.34 | -0.31 | ||
48 | AT5G16940 | carbon-sulfur lyases | -0.69 | 0.31 | -0.3 | |||
49 | AT5G47680 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA (guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA (guanine-N(1)-)-methyltransferase, metazoa (InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase, eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
AtTRM, tRNA modification 10 | 0.69 | 0.33 | -0.32 | ||
50 | AT2G05120 | Nucleoporin, Nup133/Nup155-like | 0.69 | 0.32 | -0.29 | |||
51 | AT2G24500 | Zinc finger protein 622 | FZF | 0.69 | 0.31 | -0.33 | ||
52 | AT5G51130 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.69 | 0.31 | -0.3 | |||
53 | AT5G45140 | nuclear RNA polymerase C2 | nuclear RNA polymerase C2 | 0.69 | 0.33 | -0.32 | ||
54 | AT1G72750 | translocase inner membrane subunit 23-2 | translocase inner membrane subunit 23-2, translocase inner membrane subunit 23-2 |
0.69 | 0.31 | -0.32 | ||
55 | AT1G74710 | ADC synthase superfamily protein | ARABIDOPSIS ISOCHORISMATE SYNTHASE 1, ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16, ISOCHORISMATE SYNTHASE 1, SALICYLIC ACID INDUCTION DEFICIENT 2 |
-0.69 | 0.32 | -0.33 | ||
56 | AT3G14120 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear pore protein 84/107 (InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins in 612 species: Archae - 19; Bacteria - 730; Metazoa - 2186; Fungi - 823; Plants - 382; Viruses - 37; Other Eukaryotes - 1222 (source: NCBI BLink). |
0.69 | 0.31 | -0.32 | |||
57 | AT1G68660 | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein |
-0.69 | 0.32 | -0.3 | |||
58 | AT2G02160 | CCCH-type zinc finger family protein | 0.69 | 0.31 | -0.33 | |||
59 | AT5G40760 | glucose-6-phosphate dehydrogenase 6 | glucose-6-phosphate dehydrogenase 6 |
0.69 | 0.32 | -0.31 | ||
60 | AT1G19960 | BEST Arabidopsis thaliana protein match is: transmembrane receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41 proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa - 23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
-0.68 | 0.32 | -0.3 | |||
61 | AT4G12240 | zinc finger (C2H2 type) family protein | 0.68 | 0.31 | -0.3 | |||
62 | AT5G07080 | HXXXD-type acyl-transferase family protein | -0.68 | 0.31 | -0.32 | |||
63 | AT1G56145 | Leucine-rich repeat transmembrane protein kinase | 0.68 | 0.33 | -0.33 | |||
64 | AT3G59820 | LETM1-like protein | 0.68 | 0.32 | -0.3 | |||
65 | AT3G52900 | Family of unknown function (DUF662) | -0.68 | 0.33 | -0.3 | |||
66 | AT2G27090 | Protein of unknown function (DUF630 and DUF632) | 0.68 | 0.33 | -0.33 | |||
67 | AT3G03050 | cellulose synthase-like D3 | CELLULOSE SYNTHASE LIKE D3, cellulose synthase-like D3, KOJAK, ROOT HAIR DEFECTIVE 7 |
0.68 | 0.32 | -0.31 | ||
68 | AT4G16060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
-0.68 | 0.34 | -0.3 | |||
69 | AT3G47490 | HNH endonuclease | -0.68 | 0.31 | -0.3 | |||
70 | AT5G09330 | NAC domain containing protein 82 | NAC domain containing protein 82, NAC domain containing protein 82, VND-interacting 1 |
0.67 | 0.32 | -0.29 | ||
71 | AT1G63710 | cytochrome P450, family 86, subfamily A, polypeptide 7 | cytochrome P450, family 86, subfamily A, polypeptide 7 |
-0.67 | 0.31 | -0.3 | ||
72 | AT2G40410 | Staphylococcal nuclease homologue | -0.67 | 0.33 | -0.3 | |||
73 | AT2G32730 | 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit |
0.67 | 0.31 | -0.32 | |||
74 | AT1G26660 | Prefoldin chaperone subunit family protein | 0.67 | 0.31 | -0.31 | |||
75 | AT1G11660 | heat shock protein 70 (Hsp 70) family protein | 0.67 | 0.32 | -0.33 | |||
76 | AT5G61960 | MEI2-like protein 1 | MEI2-like protein 1, MEI2-like protein 1 |
0.67 | 0.31 | -0.28 | ||
77 | AT3G44530 | homolog of histone chaperone HIRA | homolog of histone chaperone HIRA | 0.67 | 0.32 | -0.33 | ||
78 | AT5G42940 | RING/U-box superfamily protein | 0.67 | 0.32 | -0.3 | |||
79 | AT2G39435 | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related |
-0.66 | 0.31 | -0.32 | |||
80 | AT5G63530 | farnesylated protein 3 | ARABIDOPSIS THALIANA FARNESYLATED PROTEIN 3, farnesylated protein 3 |
-0.66 | 0.31 | -0.3 | ||
81 | AT5G04660 | cytochrome P450, family 77, subfamily A, polypeptide 4 | cytochrome P450, family 77, subfamily A, polypeptide 4 |
-0.66 | 0.3 | -0.31 | ||
82 | AT5G24930 | CONSTANS-like 4 | ATCOL4, CONSTANS-like 4 | -0.66 | 0.31 | -0.3 | ||
83 | AT3G56400 | WRKY DNA-binding protein 70 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY DNA-binding protein 70 |
-0.66 | 0.3 | -0.29 | ||
84 | AT1G68260 | Thioesterase superfamily protein | -0.66 | 0.33 | -0.33 | |||
85 | AT5G02560 | histone H2A 12 | histone H2A 12 | -0.66 | 0.31 | -0.31 | ||
86 | AT1G03400 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.65 | 0.33 | -0.29 | |||
87 | AT4G26070 | MAP kinase/ ERK kinase 1 | ATMEK1, MAP kinase/ ERK kinase 1, MITOGEN ACTIVATED PROTEIN KINASE KINASE 1, NMAPKK |
-0.65 | 0.31 | -0.31 | ||
88 | AT1G70210 | CYCLIN D1;1 | ATCYCD1;1, CYCLIN D1;1 | -0.65 | 0.34 | -0.33 | ||
89 | AT5G45950 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.65 | 0.33 | -0.33 | |||
90 | AT2G03530 | ureide permease 2 | ARABIDOPSIS THALIANA UREIDE PERMEASE 2, ureide permease 2 |
-0.65 | 0.31 | -0.31 | ||
91 | AT2G44230 | Plant protein of unknown function (DUF946) | -0.64 | 0.3 | -0.34 | |||
92 | AT4G10000 | Thioredoxin family protein | -0.64 | 0.3 | -0.32 | |||
93 | AT3G58350 | RESTRICTED TEV MOVEMENT 3 | RESTRICTED TEV MOVEMENT 3 | -0.64 | 0.33 | -0.31 | ||
94 | AT3G50890 | homeobox protein 28 | homeobox protein 28, homeobox protein 28, ZINC FINGER HOMEODOMAIN 7 |
-0.64 | 0.33 | -0.34 | ||
95 | AT2G44690 | Arabidopsis RAC-like 9 | Arabidopsis RAC-like 9, RHO-RELATED PROTEIN FROM PLANTS 8, RHO-RELATED PROTEIN FROM PLANTS 8 |
-0.64 | 0.3 | -0.32 | ||
96 | AT3G17950 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.64 | 0.33 | -0.3 | |||
97 | AT3G09600 | Homeodomain-like superfamily protein | LHY-CCA1-LIKE5, REVEILLE 8 | -0.64 | 0.32 | -0.3 | ||
98 | AT4G04850 | K+ efflux antiporter 3 | ATKEA3, K+ efflux antiporter 3 | -0.64 | 0.29 | -0.32 | ||
99 | AT2G38540 | lipid transfer protein 1 | ARABIDOPSIS THALIANA LIPID TRANSFER PROTEIN 1, lipid transfer protein 1, LIPID TRANSFER PROTEIN 1 |
-0.63 | 0.34 | -0.34 | ||
100 | AT3G55710 | UDP-Glycosyltransferase superfamily protein | -0.63 | 0.31 | -0.3 | |||
101 | AT3G46900 | copper transporter 2 | copper transporter 2 | -0.63 | 0.32 | -0.31 | ||
102 | AT3G13140 | hydroxyproline-rich glycoprotein family protein | -0.63 | 0.31 | -0.33 | |||
103 | AT4G01900 | GLNB1 homolog | GLNB1 homolog, PII | -0.63 | 0.32 | -0.34 | ||
104 | AT3G23010 | receptor like protein 36 | receptor like protein 36, receptor like protein 36 |
-0.63 | 0.32 | -0.31 | ||
105 | AT2G33620 | AT hook motif DNA-binding family protein | -0.63 | 0.32 | -0.33 | |||
106 | AT5G10310 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.62 | 0.32 | -0.31 | |||
107 | AT1G50590 | RmlC-like cupins superfamily protein | -0.62 | 0.3 | -0.32 | |||
108 | AT5G52540 | Protein of unknown function (DUF819) | -0.62 | 0.31 | -0.32 | |||
109 | AT2G44300 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.62 | 0.33 | -0.3 | |||
110 | AT3G09250 | Nuclear transport factor 2 (NTF2) family protein | -0.62 | 0.3 | -0.31 | |||
111 | AT4G18570 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.62 | 0.3 | -0.32 | |||
112 | AT1G12550 | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
hydroxypyruvate reductase 3 | -0.61 | 0.3 | -0.31 | ||
113 | AT1G67870 | glycine-rich protein | -0.6 | 0.32 | -0.32 | |||
114 | AT5G59050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.6 | 0.3 | -0.32 | |||
115 | AT1G59670 | glutathione S-transferase TAU 15 | glutathione S-transferase TAU 15, glutathione S-transferase TAU 15 |
-0.6 | 0.31 | -0.3 | ||
116 | AT2G33735 | Chaperone DnaJ-domain superfamily protein | -0.6 | 0.34 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
117 | C0252 | Threonic acid | D,L-Threonic acid | L-Threonate | ascorbic acid degradation | -0.73 | 0.46 | -0.47 |