AT3G11500 : -
Query Information
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AGICode AT3G11500
Description Small nuclear ribonucleoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G11500 Small nuclear ribonucleoprotein family protein 1 0.31 -0.31
2 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 0.76 0.31 -0.29
3 AT1G66390 myb domain protein 90 ATMYB90, myb domain protein 90,
PRODUCTION OF ANTHOCYANIN PIGMENT
2		 -0.72 0.32 -0.31
4 AT5G16210 HEAT repeat-containing protein -0.7 0.33 -0.33
5 AT4G29170 Mnd1 family protein ATMND1 0.7 0.32 -0.29
6 AT5G01620 TRICHOME BIREFRINGENCE-LIKE 35 TRICHOME BIREFRINGENCE-LIKE 35 0.69 0.32 -0.31
7 AT4G37710 VQ motif-containing protein -0.68 0.32 -0.32
8 AT2G43000 NAC domain containing protein 42 NAC domain containing protein 42,
NAC domain containing protein 42		 -0.67 0.31 -0.32
9 AT1G18450 actin-related protein 4 actin-related protein 4,
actin-related protein 4		 0.67 0.33 -0.29
10 AT2G41790 Insulinase (Peptidase family M16) family protein -0.66 0.28 -0.32
11 AT1G24330 ARM repeat superfamily protein -0.66 0.31 -0.33
12 AT5G51910 TCP family transcription factor 0.66 0.33 -0.31
13 AT3G03160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.33 -0.31
14 AT2G17220 Protein kinase superfamily protein kinase 3 -0.65 0.3 -0.3
15 AT2G20840 Secretory carrier membrane protein (SCAMP) family protein 0.65 0.32 -0.33
16 AT4G19430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.65 0.29 -0.3
17 AT3G12530 PSF2 PSF2 0.64 0.31 -0.32
18 AT1G78150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits
to 146 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.29 -0.33
19 AT5G05670 signal recognition particle binding 0.64 0.31 -0.31
20 AT5G15530 biotin carboxyl carrier protein 2 biotin carboxyl carrier protein 2,
CAC1-B		 0.63 0.3 -0.31
21 AT2G22900 Galactosyl transferase GMA12/MNN10 family protein 0.63 0.31 -0.31
22 AT1G80350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 AAA1, ATKTN1, BOTERO 1, ECTOPIC
ROOT HAIR 3, FRAGILE FIBER 2,
FURCA2, FAT ROOT, KATANIN 1, LUE1		 0.63 0.33 -0.31
23 AT4G31320 SAUR-like auxin-responsive protein family 0.63 0.31 -0.33
24 AT5G38120 AMP-dependent synthetase and ligase family protein 4CL8 -0.63 0.32 -0.31
25 AT3G56120 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.62 0.33 -0.32
26 AT2G34670 Protein of unknown function (DUF630 and DUF632) 0.62 0.31 -0.31
27 AT2G37950 RING/FYVE/PHD zinc finger superfamily protein 0.62 0.33 -0.33
28 AT2G25760 Protein kinase family protein -0.62 0.31 -0.33
29 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 0.62 0.31 -0.3
30 AT3G14570 glucan synthase-like 4 glucan synthase-like 4, atgsl4,
gsl04, glucan synthase-like 4		 -0.62 0.34 -0.31
31 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 -0.62 0.33 -0.32
32 AT4G36460 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.3 -0.32
33 AT1G07630 pol-like 5 pol-like 5 -0.61 0.3 -0.32
34 AT4G22250 RING/U-box superfamily protein 0.61 0.31 -0.33
35 AT1G47210 cyclin-dependent protein kinase 3;2 cyclin-dependent protein kinase
3;2		 0.61 0.33 -0.33
36 AT2G33020 receptor like protein 24 receptor like protein 24, receptor
like protein 24		 -0.61 0.33 -0.31
37 AT1G69160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 173 Blast hits
to 172 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 33; Plants - 84; Viruses - 2; Other
Eukaryotes - 29 (source: NCBI BLink).		 0.61 0.34 -0.29
38 AT4G28180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 8 growth stages; Has 1508
Blast hits to 1315 proteins in 223 species: Archae - 4;
Bacteria - 127; Metazoa - 687; Fungi - 310; Plants - 142;
Viruses - 28; Other Eukaryotes - 210 (source: NCBI BLink).		 0.61 0.32 -0.32
39 AT5G62920 response regulator 6 response regulator 6 0.61 0.32 -0.34
40 AT4G13690 unknown protein; Has 37 Blast hits to 37 proteins in 16
species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.6 0.29 -0.32
41 AT5G24670 Cytidine/deoxycytidylate deaminase family protein EMBRYO DEFECTIVE 2820, tRNA
adenosine deaminase 3		 -0.6 0.31 -0.29
42 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 0.6 0.32 -0.31
43 AT1G75810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 13 Blast hits to 13
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.31 -0.32
44 AT2G43160 ENTH/VHS family protein -0.6 0.31 -0.32
45 AT5G44290 Protein kinase superfamily protein -0.6 0.31 -0.31
46 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein -0.6 0.29 -0.34
47 AT2G27390 proline-rich family protein -0.59 0.31 -0.31
48 AT1G33070 MADS-box family protein -0.59 0.31 -0.32
49 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 0.59 0.32 -0.32
50 AT3G46020 RNA-binding (RRM/RBD/RNP motifs) family protein 0.59 0.32 -0.3
51 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 -0.59 0.34 -0.34
52 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.59 0.32 -0.31
53 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 0.59 0.31 -0.31
54 AT5G38110 anti- silencing function 1b anti- silencing function 1b,
SGA01, SGA1		 0.59 0.31 -0.31
55 AT1G67720 Leucine-rich repeat protein kinase family protein -0.58 0.31 -0.28
56 AT3G07180 GPI transamidase component PIG-S-related -0.58 0.32 -0.32
57 AT5G66620 DA1-related protein 6 DA1-related protein 6 -0.58 0.33 -0.29
58 AT1G17010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.57 0.32 -0.3
59 AT4G13080 xyloglucan endotransglucosylase/hydrolase 1 xyloglucan
endotransglucosylase/hydrolase 1		 -0.57 0.31 -0.3
60 AT5G51050 Mitochondrial substrate carrier family protein ATP/phosphate carrier 2 -0.57 0.3 -0.31
61 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 -0.57 0.31 -0.32
62 AT3G14020 nuclear factor Y, subunit A6 nuclear factor Y, subunit A6 -0.56 0.3 -0.31
63 AT5G60410 DNA-binding protein with MIZ/SP-RING zinc finger,
PHD-finger and SAP domain		 ATSIZ1, SIZ1 -0.56 0.32 -0.33
64 AT5G07260 START (StAR-related lipid-transfer) lipid-binding domain -0.56 0.31 -0.3
65 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) -0.56 0.31 -0.31
66 AT2G46560 transducin family protein / WD-40 repeat family protein -0.56 0.33 -0.32
67 AT5G20940 Glycosyl hydrolase family protein -0.56 0.31 -0.31
68 AT3G58000 VQ motif-containing protein -0.56 0.31 -0.3
69 AT3G20700 F-box associated ubiquitination effector family protein -0.56 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
70 C0050 8-Methylthio-n-octylglucosinolate - 8-Methylthiooctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine 0.75 0.48 -0.46 C0050
71 C0125 isorhamnetin-3-O-glucoside - - - 0.73 0.44 -0.45
72 C0096 Gluconic acid - D-Gluconate - -0.62 0.43 -0.47 C0096