AT3G11350 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT3G11350
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G11350 Pentatricopeptide repeat (PPR) superfamily protein 1 0.31 -0.31
2 AT3G52820 purple acid phosphatase 22 PURPLE ACID PHOSPHATASE 22, purple
acid phosphatase 22		 0.68 0.3 -0.32
3 AT3G07450 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.67 0.31 -0.31
4 AT1G70750 Protein of unknown function, DUF593 0.67 0.3 -0.31
5 AT3G46290 hercules receptor kinase 1 hercules receptor kinase 1 0.66 0.31 -0.32
6 AT1G47765 F-box and associated interaction domains-containing protein 0.65 0.33 -0.32
7 AT1G56030 RING/U-box superfamily protein -0.65 0.31 -0.31
8 AT3G14340 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.31 -0.32
9 AT2G14040 transposable element gene -0.63 0.34 -0.31
10 AT1G46696 Protein of unknown function, DUF601 0.63 0.32 -0.31
11 AT2G25500 Inosine triphosphate pyrophosphatase family protein 0.62 0.31 -0.32
12 AT3G25050 xyloglucan endotransglucosylase/hydrolase 3 xyloglucan
endotransglucosylase/hydrolase 3		 -0.62 0.32 -0.31
13 AT3G53320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast
hits to 5993 proteins in 551 species: Archae - 8; Bacteria
- 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses
- 112; Other Eukaryotes - 3198 (source: NCBI BLink).		 -0.62 0.31 -0.32
14 AT1G13290 C2H2-like zinc finger protein DEFECTIVELY ORGANIZED TRIBUTARIES
5, WIP domain protein 6		 0.62 0.3 -0.31
15 AT5G55900 Sucrase/ferredoxin-like family protein -0.61 0.3 -0.3
16 AT1G21630 Calcium-binding EF hand family protein 0.61 0.31 -0.3
17 AT3G19160 ATP/ADP isopentenyltransferases ATP/ADP isopentenyltransferases,
ATP/ADP isopentenyltransferases,
isopentenyltransferase 8, PGA22		 0.61 0.32 -0.32
18 AT3G48210 CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,
subunit Spc25 (InterPro:IPR013255); Has 194 Blast hits to
194 proteins in 72 species: Archae - 0; Bacteria - 4;
Metazoa - 72; Fungi - 39; Plants - 62; Viruses - 0; Other
Eukaryotes - 17 (source: NCBI BLink).		 -0.61 0.34 -0.29
19 AT4G19570 Chaperone DnaJ-domain superfamily protein -0.61 0.32 -0.29
20 AT1G80620 S15/NS1, RNA-binding protein -0.61 0.33 -0.35
21 AT1G12190 F-box and associated interaction domains-containing protein 0.61 0.32 -0.31
22 AT2G11210 transposable element gene 0.6 0.34 -0.32
23 AT5G64590 BEST Arabidopsis thaliana protein match is: Putative
endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.6 0.31 -0.31
24 AT2G19510 LOB domain-containing protein 8 LOB domain-containing protein 8 0.6 0.29 -0.3
25 AT1G42610 transposable element gene 0.6 0.33 -0.31
26 AT3G01330 DP-E2F-like protein 3 DP-E2F-like protein 3, E2FF,
E2F-LIKE 2		 -0.6 0.33 -0.33
27 AT5G26880 AGAMOUS-like 26 AGAMOUS-like 26 -0.6 0.3 -0.32
28 AT3G01580 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.33 -0.3
29 AT2G39120 Ubiquitin carboxyl-terminal hydrolase family protein what's this factor 9 0.59 0.33 -0.33
30 AT2G31770 RING/U-box superfamily protein ARIADNE 9, ARABIDOPSIS ARIADNE 9 -0.59 0.29 -0.34
31 AT1G31960 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.33 -0.31
32 AT4G00150 GRAS family transcription factor ARABIDOPSIS THALIANA HAIRY
MERISTEM 3, HAIRY MERISTEM 3, LOST
MERISTEMS 3		 0.58 0.33 -0.32
33 AT3G23260 F-box and associated interaction domains-containing protein 0.58 0.32 -0.3
34 AT5G54480 Protein of unknown function (DUF630 and DUF632) 0.58 0.31 -0.29
35 AT2G17750 NEP-interacting protein 1 NEP-interacting protein 1 0.58 0.32 -0.29
36 AT3G53590 Leucine-rich repeat protein kinase family protein 0.58 0.33 -0.31
37 AT3G56960 phosphatidyl inositol monophosphate 5 kinase 4 phosphatidyl inositol
monophosphate 5 kinase 4		 -0.57 0.33 -0.3
38 AT2G39640 glycosyl hydrolase family 17 protein 0.57 0.33 -0.31
39 AT4G17020 transcription factor-related -0.57 0.3 -0.31
40 ATMG00010 hypothetical protein ORF153A 0.57 0.32 -0.33
41 AT4G29980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: leaf whorl, sepal, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; BEST Arabidopsis
thaliana protein match is: Fasciclin-like arabinogalactan
family protein (TAIR:AT1G30800.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.57 0.29 -0.34
42 AT3G57250 Emsy N Terminus (ENT) domain-containing protein 0.57 0.32 -0.32
43 AT5G64720 Protein of unknown function (DUF1278) -0.56 0.32 -0.32
44 AT2G23640 Reticulan like protein B13 Reticulan like protein B13 0.56 0.31 -0.34
45 AT5G24140 squalene monooxygenase 2 squalene monooxygenase 2 0.56 0.34 -0.32
46 AT5G55130 co-factor for nitrate, reductase and xanthine dehydrogenase
5		 co-factor for nitrate, reductase
and xanthine dehydrogenase 5,
SIRTINOL RESISTANT 1		 -0.56 0.33 -0.31
47 AT4G15230 pleiotropic drug resistance 2 ATP-binding cassette G30, ATPDR2,
pleiotropic drug resistance 2		 0.56 0.33 -0.33
48 AT1G06270 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.33 -0.3
49 AT4G26280 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.33 -0.33
50 AT2G23230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.56 0.32 -0.33
51 AT2G43890 Pectin lyase-like superfamily protein 0.56 0.32 -0.31
52 AT4G35620 Cyclin B2;2 Cyclin B2;2 -0.56 0.32 -0.33
53 AT1G71160 3-ketoacyl-CoA synthase 7 3-ketoacyl-CoA synthase 7 -0.55 0.33 -0.32
54 AT1G30740 FAD-binding Berberine family protein -0.55 0.34 -0.32
55 AT5G59270 Concanavalin A-like lectin protein kinase family protein -0.55 0.33 -0.3
56 AT4G19580 DNAJ heat shock N-terminal domain-containing protein 0.55 0.32 -0.32
57 AT3G59440 Calcium-binding EF-hand family protein 0.55 0.32 -0.29
58 AT2G35030 Pentatricopeptide repeat (PPR) superfamily protein 0.55 0.31 -0.34
59 AT2G17430 Seven transmembrane MLO family protein ATMLO7, MILDEW RESISTANCE LOCUS O
7, NORTIA		 -0.55 0.3 -0.31
60 AT4G04000 transposable element gene 0.54 0.34 -0.32
61 AT3G21960 Receptor-like protein kinase-related family protein 0.54 0.29 -0.32
62 AT1G29110 Cysteine proteinases superfamily protein 0.54 0.32 -0.28
63 AT3G07710 BEST Arabidopsis thaliana protein match is: DNA-binding
storekeeper protein-related transcriptional regulator
(TAIR:AT2G25650.1); Has 38 Blast hits to 38 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.54 0.31 -0.31
64 AT2G14210 AGAMOUS-like 44 AGAMOUS-like 44, ARABIDOPSIS
NITRATE REGULATED 1		 0.54 0.32 -0.3
65 AT1G59980 ARG1-like 2 ARG1-like 2, ATDJC39, gravity
persistence signal 4		 -0.54 0.31 -0.32
66 AT2G36440 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.32 -0.33
67 AT2G22160 Cysteine proteinases superfamily protein -0.53 0.33 -0.3
68 AT1G32180 cellulose synthase-like D6 cellulose synthase-like D6,
CELLULOSE SYNTHASE LIKE D6,
cellulose synthase-like D6		 -0.52 0.32 -0.3
69 AT2G04540 Beta-ketoacyl synthase -0.52 0.31 -0.3
70 AT4G12380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.32 -0.32
71 AT5G16260 RNA binding (RRM/RBD/RNP motifs) family protein EARLY FLOWERING 9 -0.51 0.32 -0.33
72 AT1G76170 2-thiocytidine tRNA biosynthesis protein, TtcA -0.51 0.28 -0.31
73 AT2G06180 transposable element gene -0.51 0.3 -0.32
74 AT5G04030 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: egg cell; Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.5 0.34 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
75 C0078 Digalactosyldiacylglycerol-34:3 - Digalactosyldiacylglycerol-34:3 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.65 0.34 -0.34
76 C0077 Digalactosyldiacylglycerol-34:2 - Digalactosyldiacylglycerol-34:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.62 0.34 -0.37
77 C0076 Digalactosyldiacylglycerol-34:1 - Digalactosyldiacylglycerol-34:1 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.58 0.34 -0.33
78 C0201 Phosphatidylglycerol-32:1 - Phosphatidylglycerol-32:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.58 0.34 -0.34
79 C0203 Phosphatidylglycerol-34:1 - Phosphatidylglycerol-34:1 cardiolipin biosynthesis II,
linoleate biosynthesis I,
glycerophosphodiester degradation,
glutathione redox reactions I 		0.54 0.33 -0.33