AT3G01200 : PPDK regulatory protein 2
Query Information
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AGICode AT3G01200
Description PPDK regulatory protein 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G01200 PPDK regulatory protein 2 PPDK regulatory protein 2, PPDK
regulatory protein 2		 1 0.31 -0.32
2 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B 0.9 0.31 -0.31
3 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 0.83 0.31 -0.31
4 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 -0.81 0.32 -0.3
5 AT4G17370 Oxidoreductase family protein 0.8 0.3 -0.29
6 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 0.8 0.32 -0.31
7 AT3G21750 UDP-glucosyl transferase 71B1 UDP-glucosyl transferase 71B1 0.8 0.31 -0.3
8 AT4G22260 Alternative oxidase family protein IMMUTANS, IM1 0.79 0.31 -0.31
9 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 0.79 0.32 -0.31
10 AT1G64530 Plant regulator RWP-RK family protein -0.79 0.3 -0.31
11 AT5G10020 Leucine-rich receptor-like protein kinase family protein -0.79 0.31 -0.31
12 AT1G32190 alpha/beta-Hydrolases superfamily protein -0.78 0.29 -0.31
13 AT4G02120 CTP synthase family protein 0.78 0.32 -0.33
14 AT1G31170 sulfiredoxin SULFIREDOXIN, sulfiredoxin 0.78 0.33 -0.32
15 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 0.77 0.32 -0.34
16 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.77 0.33 -0.32
17 AT2G29590 Thioesterase superfamily protein 0.77 0.33 -0.32
18 AT3G54360 zinc ion binding 0.77 0.33 -0.3
19 AT3G16230 Predicted eukaryotic LigT 0.77 0.31 -0.32
20 AT4G39540 shikimate kinase 2 ATSK2, shikimate kinase 2 0.77 0.32 -0.31
21 AT1G30220 inositol transporter 2 ARABIDOPSIS THALIANA INOSITOL
TRANSPORTER 2, inositol
transporter 2		 0.77 0.3 -0.31
22 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.77 0.31 -0.3
23 AT2G43530 Scorpion toxin-like knottin superfamily protein 0.76 0.33 -0.31
24 AT5G02940 Protein of unknown function (DUF1012) 0.76 0.31 -0.31
25 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 0.76 0.29 -0.33
26 AT1G78200 Protein phosphatase 2C family protein 0.76 0.33 -0.34
27 AT1G01800 NAD(P)-binding Rossmann-fold superfamily protein 0.76 0.31 -0.31
28 AT1G03030 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.32 -0.3
29 AT3G45770 Polyketide synthase, enoylreductase family protein 0.76 0.32 -0.3
30 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 -0.76 0.32 -0.31
31 AT5G42850 Thioredoxin superfamily protein 0.76 0.31 -0.32
32 AT4G14020 Rapid alkalinization factor (RALF) family protein 0.76 0.3 -0.32
33 AT2G24860 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.76 0.33 -0.3
34 AT4G34555 Ribosomal protein S25 family protein -0.75 0.31 -0.31
35 AT2G25950 Protein of unknown function (DUF1000) 0.75 0.33 -0.31
36 AT3G63200 PATATIN-like protein 9 PLA IIIB, PATATIN-like protein 9 -0.75 0.33 -0.3
37 AT1G58200 MSCS-like 3 MSCS-like 3 0.75 0.32 -0.33
38 AT5G57815 Cytochrome c oxidase, subunit Vib family protein 0.75 0.31 -0.32
39 AT2G24820 translocon at the inner envelope membrane of chloroplasts
55-II		 translocon at the inner envelope
membrane of chloroplasts 55,
translocon at the inner envelope
membrane of chloroplasts 55,
translocon at the inner envelope
membrane of chloroplasts 55-II		 0.75 0.29 -0.3
40 AT5G20890 TCP-1/cpn60 chaperonin family protein -0.75 0.34 -0.32
41 AT3G12520 sulfate transporter 4;2 sulfate transporter 4;2 0.74 0.29 -0.32
42 AT5G40370 Glutaredoxin family protein glutaredoxin C2 0.74 0.32 -0.32
43 AT5G41210 glutathione S-transferase THETA 1 glutathione S-transferase THETA 1,
GST10, glutathione S-transferase
THETA 1		 0.74 0.32 -0.33
44 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.74 0.32 -0.33
45 AT4G36400 FAD-linked oxidases family protein D-2-hydroxyglutarate dehydrogenase 0.74 0.31 -0.32
46 AT3G05900 neurofilament protein-related -0.74 0.33 -0.33
47 AT1G13730 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 -0.74 0.31 -0.29
48 AT3G52880 monodehydroascorbate reductase 1 monodehydroascorbate reductase 1,
monodehydroascorbate reductase 1		 0.74 0.32 -0.3
49 AT5G49460 ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 -0.74 0.31 -0.33
50 AT2G32520 alpha/beta-Hydrolases superfamily protein 0.73 0.32 -0.3
51 AT5G66750 chromatin remodeling 1 ATDDM1, CHA1, CHROMATIN REMODELING
1, chromatin remodeling 1,
DECREASED DNA METHYLATION 1,
SOMNIFEROUS 1, SOM4		 -0.73 0.32 -0.32
52 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 0.73 0.35 -0.31
53 AT3G51310 VPS35 homolog C VPS35 homolog C 0.73 0.34 -0.32
54 AT5G20600 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: preribosome, small subunit
precursor; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits
to 530 proteins in 201 species: Archae - 0; Bacteria - 10;
Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other
Eukaryotes - 112 (source: NCBI BLink).		 -0.73 0.32 -0.32
55 AT4G17840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Abortive infection protein (InterPro:IPR003675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.72 0.32 -0.36
56 AT4G38460 geranylgeranyl reductase geranylgeranyl reductase 0.72 0.32 -0.31
57 AT5G58420 Ribosomal protein S4 (RPS4A) family protein -0.72 0.3 -0.34
58 AT5G42740 Sugar isomerase (SIS) family protein 0.72 0.32 -0.31
59 AT1G73040 Mannose-binding lectin superfamily protein 0.72 0.32 -0.32
60 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 0.72 0.3 -0.3
61 AT5G39730 AIG2-like (avirulence induced gene) family protein 0.72 0.31 -0.3
62 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 -0.72 0.29 -0.32
63 AT3G58170 BET1P/SFT1P-like protein 14A ATBET11, ARABIDOPSIS THALIANA
BET1P/SFT1P-LIKE PROTEIN 14A,
BET11, BET1P/SFT1P-like protein
14A		 0.72 0.31 -0.31
64 AT5G45350 proline-rich family protein 0.71 0.33 -0.32
65 AT5G23810 amino acid permease 7 amino acid permease 7 0.71 0.31 -0.34
66 AT3G45090 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.31 -0.32
67 AT1G24510 TCP-1/cpn60 chaperonin family protein -0.71 0.3 -0.31
68 AT1G80270 PENTATRICOPEPTIDE REPEAT 596 PENTATRICOPEPTIDE REPEAT 596 -0.71 0.32 -0.3
69 AT2G36970 UDP-Glycosyltransferase superfamily protein 0.71 0.34 -0.31
70 AT4G09340 SPla/RYanodine receptor (SPRY) domain-containing protein 0.71 0.3 -0.34
71 AT5G64200 ortholog of human splicing factor SC35 ortholog of human splicing factor
SC35, ARABIDOPSIS THALIANA
ORTHOLOG OF HUMAN SPLICING FACTOR
SC35, ortholog of human splicing
factor SC35		 -0.71 0.31 -0.33
72 AT3G27110 Peptidase family M48 family protein 0.71 0.32 -0.32
73 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 0.71 0.3 -0.31
74 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 -0.71 0.32 -0.3
75 AT4G16330 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.7 0.31 -0.34
76 AT5G12200 pyrimidine 2 pyrimidine 2 0.7 0.31 -0.31
77 AT4G37270 heavy metal atpase 1 ARABIDOPSIS THALIANA HEAVY METAL
ATPASE 1, heavy metal atpase 1		 0.7 0.3 -0.31
78 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 0.7 0.32 -0.33
79 AT4G29890 choline monooxygenase, putative (CMO-like) 0.7 0.33 -0.33
80 AT3G02760 Class II aaRS and biotin synthetases superfamily protein -0.7 0.29 -0.34
81 AT5G53820 Late embryogenesis abundant protein (LEA) family protein 0.7 0.29 -0.33
82 AT1G28490 syntaxin of plants 61 ATSYP61, OSM1, syntaxin of plants
61		 0.7 0.31 -0.31
83 AT1G10030 homolog of yeast ergosterol28 homolog of yeast ergosterol28 -0.7 0.31 -0.3
84 AT3G52610 unknown protein; Has 68 Blast hits to 67 proteins in 21
species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.7 0.31 -0.32
85 AT4G30130 Protein of unknown function (DUF630 and DUF632) -0.7 0.32 -0.31
86 AT4G35220 Cyclase family protein 0.7 0.29 -0.31
87 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein -0.7 0.29 -0.31
88 AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 0.7 0.31 -0.34
89 AT3G63520 carotenoid cleavage dioxygenase 1 CAROTENOID CLEAVAGE DIOXYGENASE 1,
ATNCED1, carotenoid cleavage
dioxygenase 1, NCED1		 0.7 0.32 -0.3
90 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 -0.7 0.34 -0.34
91 AT5G41060 DHHC-type zinc finger family protein -0.7 0.33 -0.32
92 AT5G14520 pescadillo-related -0.7 0.32 -0.3
93 AT2G14890 arabinogalactan protein 9 arabinogalactan protein 9 -0.69 0.33 -0.3
94 AT4G29820 homolog of CFIM-25 ARABIDOPSIS THALIANA HOMOLOG OF
CFIM-25, homolog of CFIM-25		 0.69 0.29 -0.32
95 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 0.69 0.32 -0.32
96 AT5G05210 Surfeit locus protein 6 -0.69 0.31 -0.32
97 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.69 0.31 -0.34
98 AT3G28050 nodulin MtN21 /EamA-like transporter family protein 0.69 0.31 -0.31
99 AT4G16520 Ubiquitin-like superfamily protein autophagy 8f 0.69 0.3 -0.31
100 AT3G58510 DEA(D/H)-box RNA helicase family protein -0.69 0.33 -0.32
101 AT3G56460 GroES-like zinc-binding alcohol dehydrogenase family
protein		 0.69 0.31 -0.29
102 AT4G00740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 QUASIMODO 3 -0.69 0.33 -0.32
103 AT4G32720 La protein 1 La protein 1, La protein 1 -0.69 0.3 -0.33
104 AT2G43980 inositol 1,3,4-trisphosphate 5/6-kinase 4 inositol 1,3,4-trisphosphate
5/6-kinase 4, inositol
1,3,4-trisphosphate 5/6-kinase 4		 0.69 0.31 -0.33
105 AT5G06930 LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: nucleolar protein gar2-related
(TAIR:AT2G42320.2); Has 3369 Blast hits to 1526 proteins in
313 species: Archae - 2; Bacteria - 910; Metazoa - 754;
Fungi - 336; Plants - 137; Viruses - 11; Other Eukaryotes -
1219 (source: NCBI BLink).		 -0.68 0.32 -0.3
106 AT5G18620 chromatin remodeling factor17 chromatin remodeling factor17 -0.68 0.31 -0.32
107 AT3G28860 ATP binding cassette subfamily B19 ATP-binding cassette B19,
Arabidopsis thaliana ATP-binding
cassette B19, ATMDR1, MULTIDRUG
RESISTANCE PROTEIN 11, ATPGP19,
MDR1, MDR11, P-GLYCOPROTEIN 19		 -0.68 0.33 -0.3
108 AT1G34130 staurosporin and temperature sensitive 3-like b staurosporin and temperature
sensitive 3-like b		 -0.68 0.3 -0.31
109 AT1G13030 sphere organelles protein-related -0.68 0.29 -0.33
110 AT3G23090 TPX2 (targeting protein for Xklp2) protein family -0.68 0.33 -0.3
111 AT1G12270 stress-inducible protein, putative Hop1 -0.68 0.3 -0.33
112 AT5G62440 Protein of unknown function (DUF3223) -0.68 0.3 -0.32
113 AT3G56900 Transducin/WD40 repeat-like superfamily protein -0.67 0.32 -0.34
114 AT1G75640 Leucine-rich receptor-like protein kinase family protein -0.67 0.31 -0.34
115 AT4G34670 Ribosomal protein S3Ae -0.67 0.29 -0.32
116 AT3G58660 Ribosomal protein L1p/L10e family -0.67 0.3 -0.31
117 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein -0.67 0.29 -0.31
118 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 -0.67 0.32 -0.31
119 AT2G29980 fatty acid desaturase 3 AtFAD3, fatty acid desaturase 3 -0.66 0.31 -0.31
120 AT4G31360 selenium binding -0.66 0.33 -0.31
121 AT3G18190 TCP-1/cpn60 chaperonin family protein -0.66 0.31 -0.32
122 AT2G23060 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.66 0.31 -0.32
123 AT1G04250 AUX/IAA transcriptional regulator family protein AUXIN RESISTANT 3, indole-3-acetic
acid inducible 17		 -0.66 0.35 -0.31
124 AT1G29090 Cysteine proteinases superfamily protein -0.65 0.31 -0.3
125 AT1G28290 arabinogalactan protein 31 arabinogalactan protein 31 -0.65 0.3 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
126 C0118 Hyperoside - Quercetin-3-glucoside quercetin glucoside biosynthesis (Arabidopsis),
rutin biosynthesis 		-0.81 0.43 -0.46 C0118
127 C0050 8-Methylthio-n-octylglucosinolate - 8-Methylthiooctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine -0.78 0.44 -0.44 C0050
128 C0125 isorhamnetin-3-O-glucoside - - - -0.77 0.45 -0.45
129 C0031 3-Methylthio-n-propylglucosinolate - 3-Methylthiopropylglucosinolate glucosinolate biosynthesis from homomethionine -0.75 0.45 -0.46 C0031
130 C0083 Digalactosyldiacylglycerol-36:4 - Digalactosyldiacylglycerol-36:4 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.66 0.51 -0.47 C0083