AT3G16480 : mitochondrial processing peptidase alpha subunit.....
Query Information
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AGICode AT3G16480
Description mitochondrial processing peptidase alpha subunit
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G16480 mitochondrial processing peptidase alpha subunit mitochondrial processing peptidase
alpha subunit		 1 0.3 -0.3
2 AT2G15000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast
hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.8 0.29 -0.32
3 AT4G10250 HSP20-like chaperones superfamily protein ATHSP22.0 -0.79 0.31 -0.34
4 AT1G14060 GCK domain-containing protein 0.79 0.36 -0.29
5 AT3G24440 Fibronectin type III domain-containing protein VIN3-LIKE 1, VERNALIZATION 5 0.79 0.31 -0.32
6 AT2G20940 Protein of unknown function (DUF1279) 0.79 0.33 -0.31
7 AT5G57040 Lactoylglutathione lyase / glyoxalase I family protein -0.79 0.29 -0.31
8 AT2G29530 Tim10/DDP family zinc finger protein TIM10 0.78 0.32 -0.32
9 AT3G55605 Mitochondrial glycoprotein family protein 0.78 0.31 -0.31
10 AT5G49990 Xanthine/uracil permease family protein -0.77 0.3 -0.32
11 AT1G61770 Chaperone DnaJ-domain superfamily protein 0.77 0.3 -0.31
12 AT5G56520 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.77 0.33 -0.33
13 AT3G17910 Surfeit locus 1 cytochrome c oxidase biogenesis protein EMBRYO DEFECTIVE 3121, SURFEIT 1 0.77 0.31 -0.32
14 AT1G26740 Ribosomal L32p protein family 0.77 0.34 -0.29
15 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A		 0.76 0.3 -0.31
16 AT1G64880 Ribosomal protein S5 family protein 0.76 0.33 -0.33
17 AT5G01670 NAD(P)-linked oxidoreductase superfamily protein -0.76 0.32 -0.32
18 AT3G61890 homeobox 12 homeobox 12, ARABIDOPSIS THALIANA
HOMEOBOX 12, homeobox 12		 -0.76 0.32 -0.34
19 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 0.76 0.3 -0.3
20 AT1G53645 hydroxyproline-rich glycoprotein family protein 0.76 0.33 -0.31
21 AT5G57490 voltage dependent anion channel 4 ARABIDOPSIS THALIANA VOLTAGE
DEPENDENT ANION CHANNEL 4, voltage
dependent anion channel 4		 0.75 0.3 -0.3
22 AT4G36880 cysteine proteinase1 cysteine proteinase1 0.75 0.32 -0.3
23 AT5G57610 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.75 0.31 -0.34
24 AT2G41190 Transmembrane amino acid transporter family protein -0.75 0.31 -0.31
25 AT3G48570 secE/sec61-gamma protein transport protein 0.75 0.31 -0.32
26 AT3G11410 protein phosphatase 2CA AHG3, ARABIDOPSIS THALIANA PROTEIN
PHOSPHATASE 2CA, protein
phosphatase 2CA		 -0.75 0.31 -0.3
27 AT5G01300 PEBP (phosphatidylethanolamine-binding protein) family
protein		 -0.74 0.31 -0.31
28 AT5G01520 RING/U-box superfamily protein ABA Insensitive RING Protein 2,
AtAIRP2		 -0.74 0.35 -0.3
29 AT4G26490 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.74 0.31 -0.31
30 AT2G40330 PYR1-like 6 PYR1-like 6, regulatory components
of ABA receptor 9		 0.74 0.31 -0.3
31 AT5G19040 isopentenyltransferase 5 Arabidopsis thaliana
ISOPENTENYLTRANSFERASE 5,
isopentenyltransferase 5		 0.74 0.32 -0.33
32 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid 0.74 0.31 -0.3
33 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.74 0.31 -0.3
34 AT1G08040 Protein of unknown function (DUF707) -0.74 0.31 -0.3
35 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.73 0.32 -0.33
36 AT1G43690 ubiquitin interaction motif-containing protein 0.73 0.29 -0.31
37 AT1G79520 Cation efflux family protein -0.73 0.32 -0.31
38 AT5G61970 signal recognition particle-related / SRP-related 0.73 0.35 -0.31
39 AT5G22290 NAC domain containing protein 89 NAC domain containing protein 89,
fructose-sensing quantitative
trait locus 6, NAC domain
containing protein 89		 -0.73 0.31 -0.36
40 AT3G19620 Glycosyl hydrolase family protein -0.73 0.32 -0.32
41 AT3G23430 phosphate 1 ARABIDOPSIS PHOSPHATE 1, phosphate
1		 0.73 0.3 -0.32
42 AT4G11290 Peroxidase superfamily protein 0.73 0.31 -0.33
43 AT3G23340 casein kinase I-like 10 casein kinase I-like 10 -0.73 0.32 -0.29
44 AT1G70420 Protein of unknown function (DUF1645) -0.72 0.31 -0.32
45 AT1G07430 highly ABA-induced PP2C gene 2 highly ABA-induced PP2C gene 2 -0.72 0.32 -0.3
46 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 -0.72 0.3 -0.32
47 AT5G60960 Pentatricopeptide repeat (PPR) superfamily protein PPR protein localized to the
nucleus and mitochondria 1		 0.72 0.32 -0.32
48 AT2G21045 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.72 0.32 -0.31
49 AT4G24830 arginosuccinate synthase family 0.72 0.33 -0.29
50 AT1G65090 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits
to 1033 proteins in 192 species: Archae - 0; Bacteria - 61;
Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42;
Other Eukaryotes - 598 (source: NCBI BLink).		 -0.72 0.32 -0.32
51 AT4G19410 Pectinacetylesterase family protein 0.72 0.32 -0.32
52 AT5G12840 nuclear factor Y, subunit A1 ATHAP2A, EMBRYO DEFECTIVE 2220,
HAP2A, nuclear factor Y, subunit
A1		 -0.71 0.32 -0.3
53 AT1G52060 Mannose-binding lectin superfamily protein 0.71 0.32 -0.31
54 AT4G09600 GAST1 protein homolog 3 GAST1 protein homolog 3 -0.71 0.32 -0.33
55 AT3G23660 Sec23/Sec24 protein transport family protein 0.71 0.32 -0.31
56 AT5G62470 myb domain protein 96 MYB DOMAIN PROTEIN 96, myb domain
protein 96, MYBCOV1		 -0.71 0.31 -0.3
57 AT5G15190 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 7 Blast hits to 7 proteins in
3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.33 -0.32
58 AT5G47640 nuclear factor Y, subunit B2 nuclear factor Y, subunit B2 -0.71 0.35 -0.34
59 AT1G19970 ER lumen protein retaining receptor family protein -0.71 0.29 -0.33
60 AT3G57550 guanylate kinase guanylate kinase, GUANYLATE KINAS
2		 0.71 0.3 -0.3
61 AT4G16750 Integrase-type DNA-binding superfamily protein -0.71 0.32 -0.31
62 AT5G05520 Outer membrane OMP85 family protein 0.7 0.32 -0.31
63 AT2G41870 Remorin family protein -0.7 0.31 -0.32
64 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 -0.7 0.31 -0.31
65 AT1G18810 phytochrome kinase substrate-related -0.7 0.29 -0.31
66 AT5G60520 Late embryogenesis abundant (LEA) protein-related 0.7 0.31 -0.33
67 AT3G57540 Remorin family protein -0.7 0.31 -0.34
68 AT4G00830 RNA-binding (RRM/RBD/RNP motifs) family protein LHP1-Interacting Factor 2 0.7 0.31 -0.34
69 AT5G17520 root cap 1 (RCP1) MALTOSE EXCESS 1, ROOT CAP 1 -0.7 0.33 -0.33
70 AT1G52050 Mannose-binding lectin superfamily protein 0.7 0.3 -0.31
71 AT1G72750 translocase inner membrane subunit 23-2 translocase inner membrane subunit
23-2, translocase inner membrane
subunit 23-2		 0.7 0.31 -0.3
72 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 -0.7 0.32 -0.3
73 AT1G24735 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.7 0.33 -0.32
74 AT2G15042 Leucine-rich repeat (LRR) family protein -0.69 0.28 -0.32
75 AT4G34480 O-Glycosyl hydrolases family 17 protein -0.69 0.33 -0.34
76 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.69 0.32 -0.32
77 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.69 0.29 -0.33
78 AT1G76020 Thioredoxin superfamily protein -0.69 0.3 -0.3
79 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 -0.69 0.33 -0.34
80 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.69 0.33 -0.31
81 AT5G45950 GDSL-like Lipase/Acylhydrolase superfamily protein -0.69 0.31 -0.31
82 AT1G71050 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 20		 -0.69 0.33 -0.3
83 AT4G02630 Protein kinase superfamily protein -0.69 0.31 -0.3
84 AT4G34000 abscisic acid responsive elements-binding factor 3 abscisic acid responsive
elements-binding factor 3, AtABF3,
DC3 PROMOTER-BINDING FACTOR 5		 -0.69 0.33 -0.32
85 AT5G67030 zeaxanthin epoxidase (ZEP) (ABA1) ABA DEFICIENT 1, ARABIDOPSIS
THALIANA ABA DEFICIENT 1,
ARABIDOPSIS THALIANA ZEAXANTHIN
EPOXIDASE, IMPAIRED IN
BABA-INDUCED STERILITY 3, LOW
EXPRESSION OF OSMOTIC
STRESS-RESPONSIVE GENES 6,
NON-PHOTOCHEMICAL QUENCHING 2,
ZEAXANTHIN EPOXIDASE		 -0.69 0.31 -0.32
86 AT5G50360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G48510.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.68 0.29 -0.33
87 AT4G21850 methionine sulfoxide reductase B9 methionine sulfoxide reductase B9,
methionine sulfoxide reductase B9		 0.68 0.32 -0.33
88 AT5G04310 Pectin lyase-like superfamily protein 0.68 0.3 -0.34
89 AT2G22850 basic leucine-zipper 6 basic leucine-zipper 6, basic
leucine-zipper 6		 0.68 0.3 -0.32
90 AT3G12600 nudix hydrolase homolog 16 nudix hydrolase homolog 16, nudix
hydrolase homolog 16		 0.68 0.31 -0.32
91 AT3G07060 NHL domain-containing protein embryo defective 1974 0.68 0.3 -0.29
92 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.68 0.32 -0.31
93 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.3 -0.31
94 AT3G06330 RING/U-box superfamily protein -0.68 0.31 -0.35
95 AT5G64760 regulatory particle non-ATPase subunit 5B regulatory particle non-ATPase
subunit 5B		 0.68 0.31 -0.32
96 AT5G61880 Protein Transporter, Pam16 0.68 0.33 -0.3
97 AT5G01880 RING/U-box superfamily protein -0.68 0.3 -0.34
98 AT1G26460 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.31 -0.3
99 AT3G06510 Glycosyl hydrolase superfamily protein SENSITIVE TO FREEZING 2, SENSITIVE
TO FREEZING 2		 -0.67 0.33 -0.32
100 AT3G44735 PHYTOSULFOKINE 3 PRECURSOR PHYTOSULFOKINE 3 PRECURSOR, PSK1,
PHYTOSULFOKINE 3 PRECURSOR		 -0.67 0.33 -0.33
101 AT1G73390 Endosomal targeting BRO1-like domain-containing protein -0.67 0.31 -0.31
102 AT4G24840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
protein transport, Golgi organization; LOCATED IN: vacuole;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: COG complex
component, COG2 (InterPro:IPR009316); Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.67 0.33 -0.31
103 AT1G06850 basic leucine-zipper 52 basic leucine-zipper 52, basic
leucine-zipper 52		 0.67 0.31 -0.32
104 AT5G37300 O-acyltransferase (WSD1-like) family protein WSD1 -0.67 0.33 -0.29
105 AT1G28140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2301, transmembrane
(InterPro:IPR019275); Has 140 Blast hits to 140 proteins in
72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi
- 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3
(source: NCBI BLink).		 -0.67 0.32 -0.32
106 AT1G03520 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.67 0.31 -0.31
107 AT4G08980 F-BOX WITH WD-40 2 F-BOX WITH WD-40 2 -0.66 0.29 -0.34
108 AT2G17440 plant intracellular ras group-related LRR 5 plant intracellular ras
group-related LRR 5		 0.66 0.33 -0.32
109 AT4G08460 Protein of unknown function (DUF1644) 0.66 0.32 -0.3
110 AT5G49210 unknown protein; Has 3675 Blast hits to 2315 proteins in
312 species: Archae - 2; Bacteria - 342; Metazoa - 1190;
Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes -
1742 (source: NCBI BLink).		 0.66 0.32 -0.32
111 AT3G47836 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.32 -0.33
112 AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.31 -0.31
113 AT1G52870 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.66 0.31 -0.31
114 AT3G01590 Galactose mutarotase-like superfamily protein -0.66 0.32 -0.32
115 AT4G16060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 42
Blast hits to 42 proteins in 16 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 7 (source: NCBI BLink).		 -0.66 0.32 -0.3
116 AT4G15390 HXXXD-type acyl-transferase family protein 0.66 0.31 -0.32
117 AT1G07960 PDI-like 5-1 PDI-like 5-1, PDI-like 5-1 0.66 0.32 -0.33
118 AT5G44310 Late embryogenesis abundant protein (LEA) family protein -0.66 0.33 -0.31
119 AT4G13810 receptor like protein 47 receptor like protein 47, receptor
like protein 47		 -0.66 0.3 -0.31
120 AT1G22640 myb domain protein 3 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 3, myb domain protein 3		 -0.66 0.31 -0.3
121 AT4G01280 Homeodomain-like superfamily protein -0.65 0.33 -0.31
122 AT3G45900 Ribonuclease P protein subunit P38-related -0.65 0.31 -0.31
123 AT3G46910 Cullin family protein -0.65 0.33 -0.32
124 AT2G40170 Stress induced protein ARABIDOPSIS EARLY
METHIONINE-LABELLED 6, EARLY
METHIONINE-LABELLED 6, LATE
EMBRYOGENESIS ABUNDANT 6		 -0.65 0.32 -0.31
125 AT2G16990 Major facilitator superfamily protein -0.65 0.3 -0.31
126 AT5G66040 sulfurtransferase protein 16 sulfurtransferase protein 16 -0.65 0.32 -0.31
127 AT2G46180 golgin candidate 4 golgin candidate 4 -0.65 0.34 -0.31
128 AT1G52700 alpha/beta-Hydrolases superfamily protein -0.65 0.29 -0.33
129 AT4G21940 calcium-dependent protein kinase 15 calcium-dependent protein kinase
15		 -0.65 0.33 -0.3
130 AT3G63520 carotenoid cleavage dioxygenase 1 CAROTENOID CLEAVAGE DIOXYGENASE 1,
ATNCED1, carotenoid cleavage
dioxygenase 1, NCED1		 -0.65 0.35 -0.31
131 AT2G36390 starch branching enzyme 2.1 BRANCHING ENZYME 3, starch
branching enzyme 2.1		 -0.65 0.29 -0.32
132 AT3G18500 DNAse I-like superfamily protein -0.65 0.3 -0.31
133 AT1G22710 sucrose-proton symporter 2 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 2,
sucrose-proton symporter 2,
SUCROSE TRANSPORTER 1		 -0.65 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
134 C0188 Nicotine (-)-Nicotine Nicotine - 0.67 0.44 -0.47 C0188
135 C0094 Galactosamine D-Galactosamine - - -0.67 0.44 -0.43