AT1G13300 : HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1.....
Query Information
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AGICode AT1G13300
Description myb-like transcription factor family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G13300 myb-like transcription factor family protein HYPERSENSITIVITY TO LOW
PI-ELICITED PRIMARY ROOT
SHORTENING 1		 1 0.35 -0.31
2 AT4G15680 Thioredoxin superfamily protein 0.85 0.3 -0.31
3 AT4G15700 Thioredoxin superfamily protein 0.82 0.33 -0.28
4 AT1G15040 Class I glutamine amidotransferase-like superfamily protein 0.8 0.31 -0.29
5 AT1G36060 Integrase-type DNA-binding superfamily protein 0.79 0.31 -0.31
6 AT1G80460 Actin-like ATPase superfamily protein GLI1, nonhost resistance to P. s.
phaseolicola 1		 0.77 0.3 -0.32
7 AT2G43500 Plant regulator RWP-RK family protein -0.76 0.31 -0.32
8 AT3G14840 Leucine-rich repeat transmembrane protein kinase 0.76 0.31 -0.33
9 AT2G37130 Peroxidase superfamily protein 0.75 0.32 -0.31
10 AT4G15690 Thioredoxin superfamily protein 0.75 0.3 -0.32
11 AT3G45900 Ribonuclease P protein subunit P38-related -0.75 0.33 -0.29
12 AT3G21510 histidine-containing phosphotransmitter 1 histidine-containing
phosphotransmitter 1		 0.75 0.29 -0.31
13 AT1G52070 Mannose-binding lectin superfamily protein 0.74 0.31 -0.33
14 AT1G65840 polyamine oxidase 4 polyamine oxidase 4, polyamine
oxidase 4		 0.74 0.32 -0.33
15 AT3G62930 Thioredoxin superfamily protein 0.74 0.29 -0.34
16 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 0.74 0.31 -0.32
17 AT5G64100 Peroxidase superfamily protein 0.74 0.32 -0.32
18 AT5G48560 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.74 0.3 -0.3
19 AT1G22500 RING/U-box superfamily protein Arabidopsis thaliana Arabidopsis
toxicos en levadura 15,
Arabidopsis toxicos en levadura 15		 0.73 0.32 -0.32
20 AT4G32690 hemoglobin 3 ARABIDOPSIS HEMOGLOBIN 3,
hemoglobin 3		 0.73 0.33 -0.28
21 AT4G36670 Major facilitator superfamily protein AtPLT6, AtPMT6, polyol transporter
6, polyol/monosaccharide
transporter 6		 0.73 0.32 -0.3
22 AT2G24420 DNA repair ATPase-related -0.73 0.33 -0.31
23 AT5G12140 cystatin-1 cystatin-1, cystatin-1 -0.72 0.31 -0.3
24 AT5G43910 pfkB-like carbohydrate kinase family protein 0.72 0.32 -0.32
25 AT5G56870 beta-galactosidase 4 beta-galactosidase 4 0.72 0.29 -0.33
26 AT1G21890 nodulin MtN21 /EamA-like transporter family protein -0.72 0.31 -0.32
27 AT3G13040 myb-like HTH transcriptional regulator family protein -0.72 0.3 -0.3
28 AT1G28230 purine permease 1 ATPUP1, purine permease 1 -0.72 0.32 -0.32
29 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.72 0.3 -0.32
30 AT3G23630 isopentenyltransferase 7 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 7,
isopentenyltransferase 7		 0.72 0.32 -0.31
31 AT2G32090 Lactoylglutathione lyase / glyoxalase I family protein -0.72 0.32 -0.3
32 AT4G21410 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 cysteine-rich RLK (RECEPTOR-like
protein kinase) 29		 0.72 0.3 -0.32
33 AT2G44790 uclacyanin 2 uclacyanin 2 0.72 0.31 -0.31
34 AT4G18270 translocase 11 ARABIDOPSIS THALIANA TRANSLOCASE
11, translocase 11		 -0.72 0.3 -0.33
35 AT5G05430 RNA-binding protein 0.72 0.31 -0.3
36 AT3G06300 P4H isoform 2 P4H isoform 2, prolyl
4-hydroxylase 2		 0.72 0.31 -0.32
37 AT3G50410 OBF binding protein 1 OBF binding protein 1 -0.71 0.3 -0.34
38 AT3G22750 Protein kinase superfamily protein 0.71 0.3 -0.3
39 AT5G20250 Raffinose synthase family protein DARK INDUCIBLE 10, raffinose
synthase 6		 0.71 0.34 -0.32
40 AT5G66320 GATA transcription factor 5 GATA transcription factor 5 -0.71 0.3 -0.29
41 AT5G01820 serine/threonine protein kinase 1 ATCIPK14, serine/threonine protein
kinase 1, CBL-INTERACTING PROTEIN
KINASE 14, SOS2-like protein
kinase 24, SNF1-RELATED PROTEIN
KINASE 3.15, serine/threonine
protein kinase 1		 -0.71 0.3 -0.29
42 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.71 0.32 -0.34
43 AT3G01290 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 AtHIR2, hypersensitive induced
reaction 2		 0.71 0.3 -0.33
44 AT5G62130 Per1-like family protein -0.7 0.32 -0.3
45 AT3G13760 Cysteine/Histidine-rich C1 domain family protein 0.7 0.32 -0.3
46 AT2G44380 Cysteine/Histidine-rich C1 domain family protein 0.7 0.31 -0.31
47 AT4G15660 Thioredoxin superfamily protein 0.7 0.34 -0.32
48 AT4G27840 SNARE-like superfamily protein -0.7 0.3 -0.33
49 AT1G52050 Mannose-binding lectin superfamily protein 0.69 0.32 -0.32
50 AT3G49940 LOB domain-containing protein 38 LOB domain-containing protein 38 0.69 0.31 -0.36
51 AT5G57610 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.69 0.31 -0.29
52 AT5G53980 homeobox protein 52 homeobox protein 52, homeobox
protein 52		 0.69 0.33 -0.3
53 AT1G70990 proline-rich family protein 0.69 0.32 -0.32
54 AT3G11220 Paxneb protein-related ELONGATA 1 0.68 0.32 -0.31
55 AT1G73480 alpha/beta-Hydrolases superfamily protein -0.68 0.31 -0.31
56 AT1G24260 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 9, SEPALLATA3 0.68 0.32 -0.31
57 AT4G33040 Thioredoxin superfamily protein -0.68 0.31 -0.35
58 AT1G75750 GAST1 protein homolog 1 GAST1 protein homolog 1 0.68 0.33 -0.31
59 AT5G05460 Glycosyl hydrolase family 85 AtENGase85A,
Endo-beta-N-acetyglucosaminidase
85A		 0.68 0.32 -0.32
60 AT4G35300 tonoplast monosaccharide transporter2 tonoplast monosaccharide
transporter2		 -0.68 0.28 -0.32
61 AT5G23020 2-isopropylmalate synthase 2 2-isopropylmalate synthase 2,
METHYLTHIOALKYMALATE
SYNTHASE-LIKE, MAM3		 0.68 0.3 -0.33
62 AT5G60530 late embryogenesis abundant protein-related / LEA
protein-related		 0.68 0.31 -0.33
63 AT3G21080 ABC transporter-related 0.68 0.33 -0.31
64 AT2G22240 myo-inositol-1-phosphate synthase 2 INOSITOL 3-PHOSPHATE SYNTHASE 2,
MYO-INOSITOL-1-PHOSTPATE SYNTHASE
2, myo-inositol-1-phosphate
synthase 2		 -0.68 0.33 -0.31
65 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 0.68 0.34 -0.34
66 AT5G65480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G38060.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.67 0.32 -0.31
67 AT2G34300 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.67 0.29 -0.29
68 AT5G64000 Inositol monophosphatase family protein ATSAL2, SAL2 0.67 0.34 -0.32
69 AT5G52410 CONTAINS InterPro DOMAIN/s: S-layer homology domain
(InterPro:IPR001119); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23890.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.31 -0.29
70 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.67 0.3 -0.31
71 AT5G56520 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G55365.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.67 0.3 -0.3
72 AT1G44830 Integrase-type DNA-binding superfamily protein 0.67 0.3 -0.31
73 AT4G25110 metacaspase 2 metacaspase 2, metacaspase 1c,
metacaspase 2, metacaspase 1c		 0.67 0.3 -0.32
74 AT4G04750 Major facilitator superfamily protein -0.66 0.31 -0.31
75 AT3G54770 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.31 -0.31
76 AT5G04310 Pectin lyase-like superfamily protein 0.66 0.31 -0.29
77 AT1G29390 cold regulated 314 thylakoid membrane 2 cold regulated 314 thylakoid
membrane 2, COLD REGULATED 314
INNER MEMBRANE 2		 -0.66 0.31 -0.33
78 AT4G17070 peptidyl-prolyl cis-trans isomerases 0.66 0.3 -0.33
79 AT3G26610 Pectin lyase-like superfamily protein 0.66 0.32 -0.31
80 AT3G15630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast
hits to 61 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.32 -0.31
81 AT2G24580 FAD-dependent oxidoreductase family protein 0.66 0.31 -0.31
82 AT5G64120 Peroxidase superfamily protein 0.65 0.34 -0.3
83 AT1G05300 zinc transporter 5 precursor zinc transporter 5 precursor 0.65 0.31 -0.32
84 AT3G25790 myb-like transcription factor family protein 0.65 0.33 -0.32
85 AT2G21590 Glucose-1-phosphate adenylyltransferase family protein APL4 -0.65 0.34 -0.3
86 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 -0.65 0.3 -0.31
87 AT1G14220 Ribonuclease T2 family protein 0.65 0.3 -0.31
88 AT5G59000 RING/FYVE/PHD zinc finger superfamily protein -0.65 0.33 -0.33
89 AT1G13920 Remorin family protein -0.65 0.32 -0.31
90 AT1G16850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to salt stress; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, leaf whorl,
male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six
leaves visible, LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast
hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.34
91 AT5G14640 shaggy-like kinase 13 SHAGGY-LIKE KINASE 13, shaggy-like
kinase 13		 -0.64 0.34 -0.31
92 AT3G54820 plasma membrane intrinsic protein 2;5 plasma membrane intrinsic protein
2;5, PLASMA MEMBRANE INTRINSIC
PROTEIN 2D		 -0.64 0.3 -0.31
93 AT5G13870 xyloglucan endotransglucosylase/hydrolase 5 endoxyloglucan transferase A4,
xyloglucan
endotransglucosylase/hydrolase 5		 0.64 0.33 -0.29
94 AT3G07360 plant U-box 9 ARABIDOPSIS THALIANA PLANT U-BOX
9, plant U-box 9		 -0.64 0.3 -0.3
95 AT5G61810 Mitochondrial substrate carrier family protein ATP/phosphate carrier 1 -0.64 0.3 -0.33
96 AT5G60140 AP2/B3-like transcriptional factor family protein 0.64 0.27 -0.33
97 AT5G52660 Homeodomain-like superfamily protein -0.64 0.32 -0.33
98 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 0.64 0.31 -0.31
99 AT3G44510 alpha/beta-Hydrolases superfamily protein 0.64 0.29 -0.31
100 AT3G62700 multidrug resistance-associated protein 10 ATP-binding cassette C14,
multidrug resistance-associated
protein 10, multidrug
resistance-associated protein 10		 -0.64 0.31 -0.31
101 AT3G13590 Cysteine/Histidine-rich C1 domain family protein -0.64 0.31 -0.31
102 AT4G26220 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.64 0.33 -0.3
103 AT2G37890 Mitochondrial substrate carrier family protein 0.63 0.32 -0.29
104 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein -0.63 0.32 -0.32
105 AT3G05030 sodium hydrogen exchanger 2 ATNHX2, sodium hydrogen exchanger
2		 -0.63 0.29 -0.32
106 AT2G28550 related to AP2.7 related to AP2.7, TARGET OF EARLY
ACTIVATION TAGGED (EAT) 1		 -0.63 0.29 -0.33
107 AT5G14120 Major facilitator superfamily protein 0.63 0.32 -0.3
108 AT5G20270 heptahelical transmembrane protein1 heptahelical transmembrane
protein1		 -0.63 0.32 -0.32
109 AT1G62710 beta vacuolar processing enzyme beta vacuolar processing enzyme,
BETAVPE		 -0.63 0.33 -0.3
110 AT5G65890 ACT domain repeat 1 ACT domain repeat 1 -0.63 0.34 -0.35
111 AT2G23630 SKU5 similar 16 SKU5 similar 16 0.63 0.32 -0.32
112 AT1G62430 CDP-diacylglycerol synthase 1 CDP-diacylglycerol synthase 1,
CDP-diacylglycerol synthase 1		 -0.63 0.32 -0.32
113 AT1G78090 trehalose-6-phosphate phosphatase Arabidopsis thaliana
trehalose-6-phosphate phosphatase
B, trehalose-6-phosphate
phosphatase B		 0.63 0.34 -0.3
114 AT1G02860 SPX (SYG1/Pho81/XPR1) domain-containing protein BENZOIC ACID HYPERSENSITIVE 1,
nitrogen limitation adaptation		 0.63 0.3 -0.3
115 AT3G47295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 13 Blast hits to 13
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.63 0.32 -0.3
116 AT1G74420 fucosyltransferase 3 ATFUT3, fucosyltransferase 3 -0.62 0.3 -0.29
117 AT2G42530 cold regulated 15b cold regulated 15b -0.62 0.29 -0.3
118 AT1G48100 Pectin lyase-like superfamily protein -0.62 0.32 -0.32
119 AT4G37160 SKU5 similar 15 SKU5 similar 15 0.62 0.31 -0.32
120 AT5G53130 cyclic nucleotide gated channel 1 CYCLIC NUCLEOTIDE-GATED CHANNEL 1,
cyclic nucleotide gated channel 1		 -0.62 0.32 -0.31
121 AT3G16770 ethylene-responsive element binding protein ethylene-responsive element
binding protein,
ethylene-responsive element
binding protein, ETHYLENE RESPONSE
FACTOR 72, RELATED TO AP2 3		 0.62 0.31 -0.34
122 AT2G19780 Leucine-rich repeat (LRR) family protein -0.62 0.31 -0.3
123 AT5G47650 nudix hydrolase homolog 2 nudix hydrolase homolog 2,
ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 2, nudix
hydrolase homolog 2		 -0.62 0.32 -0.34
124 AT4G09560 Protease-associated (PA) RING/U-box zinc finger family
protein		 -0.62 0.28 -0.32
125 AT5G42720 Glycosyl hydrolase family 17 protein -0.62 0.31 -0.32
126 AT1G19970 ER lumen protein retaining receptor family protein -0.62 0.3 -0.3
127 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.62 0.31 -0.33
128 AT1G78070 Transducin/WD40 repeat-like superfamily protein -0.62 0.3 -0.3
129 AT4G34100 RING/U-box superfamily protein -0.61 0.31 -0.33
130 AT3G07940 Calcium-dependent ARF-type GTPase activating protein family -0.61 0.32 -0.33
131 AT2G16990 Major facilitator superfamily protein -0.61 0.31 -0.32
132 AT3G14720 MAP kinase 19 ARABIDOPSIS THALIANA MAP KINASE
19, MAP kinase 19		 -0.61 0.31 -0.31
133 AT3G02130 receptor-like protein kinase 2 clv3 peptide insensitive 1,
receptor-like protein kinase 2,
TOADSTOOL 2		 -0.61 0.31 -0.3
134 AT5G64080 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP1, xylogen protein 1 -0.61 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
135 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		-0.82 0.45 -0.44 C0225
136 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.81 0.48 -0.45 C0016
137 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - -0.75 0.43 -0.44
138 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		-0.7 0.32 -0.32 C0092