AT3G16380 : poly(A) binding protein 6
Query Information
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AGICode AT3G16380
Description poly(A) binding protein 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G16380 poly(A) binding protein 6 poly(A) binding protein 6 1 0.31 -0.31
2 AT2G16210 Transcriptional factor B3 family protein 0.8 0.32 -0.3
3 AT3G42850 Mevalonate/galactokinase family protein 0.79 0.34 -0.31
4 AT3G01380 transferases;sulfuric ester
hydrolases;catalytics;transferases		 0.78 0.29 -0.31
5 AT2G07070 transposable element gene 0.77 0.32 -0.36
6 AT3G25280 Major facilitator superfamily protein 0.77 0.3 -0.33
7 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED 0.77 0.33 -0.31
8 AT5G61940 Ubiquitin carboxyl-terminal hydrolase-related protein 0.76 0.31 -0.35
9 AT2G31100 alpha/beta-Hydrolases superfamily protein 0.76 0.32 -0.32
10 AT5G57720 AP2/B3-like transcriptional factor family protein 0.76 0.3 -0.31
11 AT2G05200 transposable element gene 0.76 0.31 -0.29
12 AT2G05000 transposable element gene 0.76 0.3 -0.29
13 AT5G24230 Lipase class 3-related protein 0.76 0.31 -0.3
14 AT4G30300 non-intrinsic ABC protein 15 ATP-binding cassette E3,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 15, non-intrinsic ABC
protein 15		 0.76 0.31 -0.33
15 AT2G13940 transposable element gene 0.75 0.31 -0.3
16 AT2G44260 Plant protein of unknown function (DUF946) -0.75 0.3 -0.32
17 AT4G32750 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.75 0.32 -0.31
18 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 0.75 0.33 -0.3
19 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 0.74 0.3 -0.33
20 AT5G04200 metacaspase 9 metacaspase 9, metacaspase 2f,
metacaspase 9, metacaspase 2f		 -0.74 0.31 -0.3
21 AT1G69990 Leucine-rich repeat protein kinase family protein 0.74 0.32 -0.31
22 AT1G59535 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.73 0.31 -0.29
23 AT5G38340 Disease resistance protein (TIR-NBS-LRR class) family 0.73 0.32 -0.3
24 AT2G15750 transposable element gene 0.73 0.32 -0.31
25 AT4G15200 formin 3 formin 3, formin 3 0.73 0.3 -0.32
26 AT2G45080 cyclin p3;1 cyclin p3;1 0.73 0.31 -0.3
27 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.72 0.33 -0.31
28 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 0.72 0.31 -0.32
29 AT2G42060 Cysteine/Histidine-rich C1 domain family protein 0.72 0.33 -0.32
30 AT4G07840 transposable element gene 0.72 0.34 -0.31
31 AT1G30710 FAD-binding Berberine family protein -0.72 0.31 -0.33
32 AT3G21550 DUF679 domain membrane protein 2 Arabidopsis thaliana DUF679 domain
membrane protein 2, DUF679 domain
membrane protein 2		 -0.72 0.3 -0.33
33 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein 0.71 0.31 -0.33
34 AT1G30010 Intron maturase, type II family protein 0.71 0.3 -0.34
35 AT5G45080 phloem protein 2-A6 phloem protein 2-A6, phloem
protein 2-A6		 0.71 0.31 -0.32
36 AT5G24560 phloem protein 2-B12 phloem protein 2-B12, phloem
protein 2-B12		 0.71 0.32 -0.29
37 AT1G43140 Cullin family protein 0.71 0.33 -0.3
38 AT4G03950 Nucleotide/sugar transporter family protein 0.71 0.3 -0.32
39 AT5G25290 F-box family protein with a domain of unknown function
(DUF295)		 0.71 0.31 -0.29
40 AT2G06820 transposable element gene 0.7 0.31 -0.35
41 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.7 0.31 -0.33
42 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.29 -0.31
43 AT5G57420 indole-3-acetic acid inducible 33 indole-3-acetic acid inducible 33 0.7 0.3 -0.32
44 AT1G26820 ribonuclease 3 ribonuclease 3 -0.7 0.32 -0.29
45 AT1G05750 Tetratricopeptide repeat (TPR)-like superfamily protein CLB19, pigment defective 247 0.7 0.32 -0.33
46 AT4G10260 pfkB-like carbohydrate kinase family protein 0.7 0.33 -0.34
47 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.7 0.31 -0.34
48 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.7 0.31 -0.33
49 AT4G20235 cytochrome P450, family 71, subfamily A, polypeptide 28 cytochrome P450, family 71,
subfamily A, polypeptide 28		 0.7 0.28 -0.3
50 AT1G78720 SecY protein transport family protein 0.69 0.34 -0.32
51 AT4G32920 glycine-rich protein 0.69 0.31 -0.32
52 AT5G12180 calcium-dependent protein kinase 17 calcium-dependent protein kinase
17		 0.69 0.32 -0.33
53 AT2G24255 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF295 (InterPro:IPR005174); BEST
Arabidopsis thaliana protein match is: Protein of unknown
function (DUF295) (TAIR:AT1G64840.1); Has 124 Blast hits to
121 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.33 -0.34
54 AT1G31030 transposable element gene 0.69 0.3 -0.31
55 AT1G33320 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 0.69 0.32 -0.29
56 AT3G49162 pseudogene of glycoside hydrolase family 28 protein -0.69 0.32 -0.32
57 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 0.68 0.32 -0.31
58 AT1G77860 Rhomboid-related intramembrane serine protease family
protein		 KOMPEITO 0.68 0.3 -0.31
59 AT5G13670 nodulin MtN21 /EamA-like transporter family protein 0.68 0.33 -0.32
60 AT5G54950 Aconitase family protein 0.68 0.32 -0.31
61 AT3G56610 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: embryo, sperm cell,
sepal, pedicel, synergid; EXPRESSED DURING: 4 anthesis, C
globular stage; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF784, Arabidopsis thaliana
(InterPro:IPR008502); Has 5 Blast hits to 5 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.32 -0.31
62 AT4G13420 high affinity K+ transporter 5 ARABIDOPSIS THALIANA HIGH AFFINITY
K+ TRANSPORTER 5, high affinity K+
transporter 5		 0.68 0.3 -0.31
63 AT3G42600 transposable element gene 0.68 0.31 -0.29
64 AT5G28590 DNA-binding family protein 0.68 0.32 -0.31
65 AT2G13510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G13500.1); Has 136 Blast hits
to 116 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.33 -0.3
66 AT3G26870 Plant self-incompatibility protein S1 family 0.68 0.32 -0.3
67 AT2G18820 transposable element gene 0.67 0.31 -0.33
68 AT5G35420 transposable element gene 0.67 0.31 -0.32
69 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 0.67 0.3 -0.31
70 AT5G42170 SGNH hydrolase-type esterase superfamily protein 0.67 0.32 -0.32
71 AT5G30380 transposable element gene 0.67 0.34 -0.31
72 AT1G43790 tracheary element differentiation-related 6 tracheary element
differentiation-related 6		 -0.67 0.32 -0.33
73 AT4G35370 Transducin/WD40 repeat-like superfamily protein 0.67 0.3 -0.32
74 AT3G42820 transposable element gene 0.67 0.31 -0.31
75 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED -0.67 0.32 -0.32
76 AT3G51680 NAD(P)-binding Rossmann-fold superfamily protein AtSDR2, short-chain
dehydrogenase/reductase 2		 0.67 0.31 -0.3
77 AT3G62640 Protein of unknown function (DUF3511) 0.67 0.31 -0.33
78 AT1G26760 SET domain protein 35 ATXR1, SET domain protein 35 0.67 0.3 -0.32
79 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 0.67 0.32 -0.32
80 AT5G61800 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.34 -0.33
81 AT3G31920 transposable element gene 0.67 0.31 -0.32
82 AT3G61800 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2043 (InterPro:IPR018610), ENTH/VHS
(InterPro:IPR008942); Has 308 Blast hits to 279 proteins in
95 species: Archae - 2; Bacteria - 30; Metazoa - 120; Fungi
- 19; Plants - 44; Viruses - 2; Other Eukaryotes - 91
(source: NCBI BLink).		 0.66 0.3 -0.35
83 AT5G44970 Protein with RNI-like/FBD-like domains 0.66 0.31 -0.31
84 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 -0.66 0.32 -0.3
85 AT3G54130 Josephin family protein -0.66 0.31 -0.32
86 AT1G12630 Integrase-type DNA-binding superfamily protein 0.66 0.32 -0.31
87 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 -0.66 0.33 -0.3
88 AT1G55410 pseudogene, CHP-rich zinc finger protein, putative, similar
to putative CHP-rich zinc finger protein GB:CAB77744
GI:7268217 from (Arabidopsis thaliana)		 0.66 0.29 -0.31
89 AT2G32050 Family of unknown function (DUF572) 0.66 0.29 -0.31
90 AT1G12720 transposable element gene 0.66 0.31 -0.3
91 AT4G10950 SGNH hydrolase-type esterase superfamily protein 0.65 0.32 -0.3
92 AT1G35970 transposable element gene 0.65 0.32 -0.31
93 AT3G48900 single-stranded DNA endonuclease family protein 0.65 0.32 -0.31
94 AT3G61390 RING/U-box superfamily protein 0.65 0.3 -0.32
95 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.65 0.31 -0.32
96 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 -0.65 0.32 -0.29
97 AT4G00940 Dof-type zinc finger DNA-binding family protein -0.65 0.31 -0.31
98 AT3G44770 Protein of unknown function (DUF626) 0.65 0.33 -0.3
99 AT4G21500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast
hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.65 0.34 -0.33
100 AT5G51520 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.65 0.32 -0.31
101 AT2G02830 transposable element gene 0.65 0.32 -0.3
102 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein 0.65 0.32 -0.33
103 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.3 -0.29
104 AT4G09540 transposable element gene -0.65 0.31 -0.31
105 AT1G48270 G-protein-coupled receptor 1 G-protein-coupled receptor 1 -0.64 0.31 -0.3
106 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.33 -0.31
107 AT3G25900 Homocysteine S-methyltransferase family protein ATHMT-1, HMT-1 -0.64 0.34 -0.31
108 AT3G42390 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.31 -0.33
109 AT5G14470 GHMP kinase family protein -0.64 0.31 -0.35
110 AT1G31760 SWIB/MDM2 domain superfamily protein -0.64 0.32 -0.3
111 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B -0.63 0.31 -0.31
112 AT5G28070 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.33 -0.33
113 AT2G23940 Protein of unknown function (DUF788) -0.62 0.29 -0.31
114 AT3G08630 Protein of unknown function (DUF3411) -0.62 0.32 -0.33
115 AT5G10770 Eukaryotic aspartyl protease family protein -0.62 0.33 -0.31
116 AT5G15890 TRICHOME BIREFRINGENCE-LIKE 21 TRICHOME BIREFRINGENCE-LIKE 21 -0.62 0.3 -0.32
117 AT1G20480 AMP-dependent synthetase and ligase family protein -0.61 0.31 -0.33
118 AT3G20470 glycine-rich protein 5 ATGRP-5, ATGRP5, GLYCINE-RICH
PROTEIN 5, glycine-rich protein 5		 -0.61 0.31 -0.32
119 AT3G50210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.32 -0.3
120 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.35 -0.32
121 AT4G36160 NAC domain containing protein 76 NAC domain containing protein 76,
NAC domain containing protein 76,
VASCULAR-RELATED NAC-DOMAIN 2		 -0.61 0.3 -0.3
122 AT5G63620 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.61 0.32 -0.3
123 AT1G02816 Protein of unknown function, DUF538 -0.6 0.31 -0.31
124 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.6 0.31 -0.31
125 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.6 0.31 -0.28
126 AT1G70500 Pectin lyase-like superfamily protein -0.6 0.29 -0.29
127 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.6 0.32 -0.3
128 AT4G24500 hydroxyproline-rich glycoprotein family protein -0.59 0.31 -0.32
129 AT4G03770 transposable element gene -0.59 0.3 -0.31
130 AT2G19560 proteasome family protein AtTHP1, ENHANCED ETHYLENE RESPONSE
5, ectopic expression of seed
storage proteins 1		 -0.59 0.31 -0.3
131 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.59 0.32 -0.32
132 AT5G02740 Ribosomal protein S24e family protein -0.59 0.31 -0.31
133 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 -0.59 0.32 -0.3
134 AT2G31570 glutathione peroxidase 2 glutathione peroxidase 2,
glutathione peroxidase 2		 -0.59 0.32 -0.3
135 AT1G54790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.59 0.3 -0.31
136 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.59 0.33 -0.3
137 AT1G03020 Thioredoxin superfamily protein -0.59 0.31 -0.33
138 AT2G18880 vernalization5/VIN3-like vernalization5/VIN3-like 2,
VIN3-like 3		 -0.58 0.32 -0.3
139 AT2G27280 Coiled-coil domain-containing protein 55 (DUF2040) -0.58 0.34 -0.32
140 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.58 0.3 -0.32
141 AT5G16790 Tho complex subunit 7/Mft1p AtTHO7, THO7 -0.58 0.31 -0.29
142 AT5G52360 actin depolymerizing factor 10 actin depolymerizing factor 10 -0.58 0.3 -0.31
143 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.31 -0.34
144 AT2G25720 unknown protein; Has 38 Blast hits to 38 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.31 -0.35
145 AT1G22885 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.3 -0.31
146 AT5G58500 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 5 -0.58 0.31 -0.3
147 AT5G04740 ACT domain-containing protein ACT domain repeats 12 -0.57 0.31 -0.33
148 AT1G75400 RING/U-box superfamily protein -0.57 0.32 -0.33
149 AT4G37780 myb domain protein 87 ATMYB87, myb domain protein 87 -0.57 0.34 -0.32
150 AT2G34440 AGAMOUS-like 29 AGAMOUS-like 29 -0.57 0.29 -0.35
151 AT4G12530 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.57 0.33 -0.32
152 AT5G46115 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.57 0.31 -0.3
153 AT2G42660 Homeodomain-like superfamily protein -0.57 0.32 -0.31
154 AT5G01440 BEST Arabidopsis thaliana protein match is: Insulinase
(Peptidase family M16) family protein (TAIR:AT1G06900.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.57 0.32 -0.3