AT1G17730 : CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1B.....
Query Information
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AGICode AT1G17730
Description vacuolar protein sorting 46.1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G17730 vacuolar protein sorting 46.1 CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1B, vacuolar protein
sorting 46.1		 1 0.33 -0.31
2 AT2G20580 26S proteasome regulatory subunit S2 1A 26S PROTEASOME REGULATORY SUBUNIT
S2 1A, 26S proteasome regulatory
subunit S2 1A		 0.79 0.32 -0.33
3 AT3G15060 RAB GTPase homolog A1G RAB GTPase homolog A1G, RAB GTPase
homolog A1G		 0.79 0.33 -0.3
4 AT1G73030 SNF7 family protein CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1A, VPS46.2		 0.78 0.31 -0.33
5 AT1G74640 alpha/beta-Hydrolases superfamily protein 0.77 0.31 -0.31
6 AT2G19200 unknown protein -0.77 0.34 -0.34
7 AT3G19950 RING/U-box superfamily protein 0.76 0.31 -0.3
8 AT5G23170 Protein kinase superfamily protein -0.76 0.34 -0.31
9 AT5G42000 ORMDL family protein 0.74 0.32 -0.32
10 AT4G21160 Calcium-dependent ARF-type GTPase activating protein family ARF-GAP domain 12, ZAC 0.74 0.28 -0.34
11 AT1G08510 fatty acyl-ACP thioesterases B fatty acyl-ACP thioesterases B 0.74 0.32 -0.32
12 AT5G50020 DHHC-type zinc finger family protein 0.74 0.32 -0.33
13 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein 0.73 0.33 -0.33
14 AT2G45980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 ATG8-interacting protein 1 0.73 0.3 -0.29
15 AT3G24350 syntaxin of plants 32 ATSYP32, syntaxin of plants 32 0.73 0.31 -0.32
16 AT4G36800 RUB1 conjugating enzyme 1 RUB1 conjugating enzyme 1 0.72 0.31 -0.29
17 AT5G20880 transposable element gene 0.72 0.32 -0.33
18 AT4G22220 SufE/NifU family protein ATISU1, ISU1 0.72 0.33 -0.33
19 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 0.72 0.31 -0.31
20 AT1G15370 SNARE-like superfamily protein 0.72 0.32 -0.31
21 AT3G04090 small and basic intrinsic protein 1A SIP1;1, small and basic intrinsic
protein 1A		 0.72 0.33 -0.31
22 AT1G68070 Zinc finger, C3HC4 type (RING finger) family protein 0.71 0.32 -0.32
23 AT3G52120 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / D111/G-patch domain-containing protein		 0.71 0.3 -0.31
24 AT1G02560 nuclear encoded CLP protease 5 nuclear encoded CLP protease 5,
NUCLEAR-ENCODED CLPP 1, NUCLEAR
CLPP 5		 0.71 0.32 -0.31
25 AT2G24320 alpha/beta-Hydrolases superfamily protein -0.71 0.34 -0.31
26 AT2G23530 Zinc-finger domain of monoamine-oxidase A repressor R1 -0.7 0.31 -0.33
27 AT1G32410 Vacuolar protein sorting 55 (VPS55) family protein 0.7 0.31 -0.3
28 AT5G07270 XB3 ortholog 3 in Arabidopsis thaliana XB3 ortholog 3 in Arabidopsis
thaliana		 0.7 0.33 -0.33
29 AT1G79510 Uncharacterized conserved protein (DUF2358) 0.7 0.33 -0.34
30 AT1G60430 actin-related protein C3 actin-related protein C3 0.7 0.31 -0.31
31 AT2G36250 Tubulin/FtsZ family protein ATFTSZ2-1, FTSZ2-1 0.7 0.32 -0.3
32 AT1G28375 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.69 0.33 -0.32
33 AT3G21800 UDP-glucosyl transferase 71B8 UDP-glucosyl transferase 71B8 -0.69 0.32 -0.34
34 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.69 0.32 -0.3
35 AT4G23930 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.69 0.32 -0.31
36 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 0.69 0.28 -0.31
37 AT5G59300 ubiquitin carrier protein 7 ARABIDOPSIS THALIANA UBIQUITIN
CARRIER PROTEIN 7, ubiquitin
carrier protein 7		 0.69 0.29 -0.31
38 AT4G14910 HISTIDINE BIOSYNTHESIS 5B HISTIDINE BIOSYNTHESIS 5B 0.68 0.32 -0.3
39 AT1G02750 Drought-responsive family protein 0.68 0.32 -0.32
40 AT3G05500 Rubber elongation factor protein (REF) 0.68 0.31 -0.31
41 AT3G22990 ARM repeat superfamily protein LEAF AND FLOWER RELATED 0.68 0.31 -0.33
42 AT1G72390 CONTAINS InterPro DOMAIN/s: Spt20 family
(InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins
in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198;
Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes
- 1797 (source: NCBI BLink).		 0.68 0.32 -0.3
43 AT1G49370 pseudogene, similar to OSJNBa0072F16.8, blastp match of 42%
identity and 6.6e-73 P-value to
GP|21739229|emb|CAD40984.1||AL606460 OSJNBa0072F16.8 {Oryza
sativa (japonica cultivar-group)}		 -0.67 0.32 -0.31
44 AT4G26130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G56980.1); Has 121 Blast hits to 116 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi -
0; Plants - 113; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.67 0.31 -0.32
45 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1		 -0.67 0.32 -0.32
46 AT5G58180 Synaptobrevin family protein ATYKT62, YKT62 0.67 0.3 -0.32
47 AT5G11740 arabinogalactan protein 15 arabinogalactan protein 15,
ATAGP15		 0.67 0.34 -0.35
48 AT2G12300 transposable element gene -0.67 0.32 -0.32
49 AT1G69340 appr-1-p processing enzyme family protein 0.67 0.32 -0.31
50 AT1G63830 PLAC8 family protein 0.67 0.31 -0.29
51 AT3G13800 Metallo-hydrolase/oxidoreductase superfamily protein 0.67 0.33 -0.3
52 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 -0.67 0.32 -0.3
53 AT5G66200 armadillo repeat only 2 armadillo repeat only 2 0.67 0.32 -0.31
54 AT4G03860 transposable element gene 0.67 0.29 -0.32
55 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.67 0.32 -0.32
56 AT3G57070 Glutaredoxin family protein 0.66 0.3 -0.31
57 AT1G72180 Leucine-rich receptor-like protein kinase family protein 0.66 0.33 -0.32
58 AT3G42790 alfin-like 3 alfin-like 3 0.66 0.32 -0.31
59 AT3G49760 basic leucine-zipper 5 basic leucine-zipper 5, basic
leucine-zipper 5		 -0.66 0.32 -0.34
60 AT3G25560 NSP-interacting kinase 2 NSP-interacting kinase 2 -0.66 0.32 -0.32
61 AT2G32360 Ubiquitin-like superfamily protein -0.66 0.31 -0.32
62 AT2G46200 unknown protein; Has 2968 Blast hits to 2381 proteins in
310 species: Archae - 16; Bacteria - 188; Metazoa - 1070;
Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes -
1318 (source: NCBI BLink).		 -0.66 0.31 -0.33
63 AT1G66150 transmembrane kinase 1 transmembrane kinase 1 0.66 0.33 -0.31
64 AT1G19060 Protein of unknown function (DUF626) -0.66 0.33 -0.3
65 AT1G57590 Pectinacetylesterase family protein -0.66 0.3 -0.31
66 AT5G48300 ADP glucose pyrophosphorylase 1 ADP glucose pyrophosphorylase 1,
ADP-GLUCOSE PYROPHOSPHORYLASE
SMALL SUBUNIT 1		 0.66 0.32 -0.35
67 AT4G29230 NAC domain containing protein 75 NAC domain containing protein 75,
NAC domain containing protein 75		 0.65 0.32 -0.32
68 AT4G04410 transposable element gene -0.65 0.31 -0.32
69 AT1G48670 auxin-responsive GH3 family protein -0.65 0.31 -0.31
70 AT4G03570 Cystatin/monellin superfamily protein -0.65 0.34 -0.31
71 AT4G12790 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.31 -0.32
72 AT3G49480 Protein with RNI-like/FBD-like domains 0.65 0.3 -0.3
73 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 0.65 0.32 -0.31
74 AT2G29600 Galactose oxidase/kelch repeat superfamily protein 0.65 0.33 -0.33
75 AT1G04030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits
to 1511 proteins in 238 species: Archae - 7; Bacteria -
164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses -
22; Other Eukaryotes - 943 (source: NCBI BLink).		 -0.65 0.31 -0.34
76 AT2G30120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits
to 241 proteins in 42 species: Archae - 4; Bacteria - 15;
Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other
Eukaryotes - 49 (source: NCBI BLink).		 0.65 0.3 -0.32
77 AT5G36250 Protein phosphatase 2C family protein 0.65 0.31 -0.33
78 AT1G77910 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.29 -0.33
79 AT2G36680 Modifier of rudimentary (Mod(r)) protein 0.65 0.32 -0.33
80 AT2G45670 calcineurin B subunit-related 0.65 0.31 -0.31
81 AT4G32290 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.65 0.32 -0.31
82 AT4G08490 transposable element gene -0.64 0.32 -0.31
83 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 -0.64 0.31 -0.32
84 AT3G62760 Glutathione S-transferase family protein ATGSTF13 -0.64 0.3 -0.3
85 AT5G09290 Inositol monophosphatase family protein -0.63 0.32 -0.31
86 AT1G33000 transposable element gene -0.63 0.33 -0.31
87 AT3G61940 Cation efflux family protein ATMTPA1, MTPA1 -0.63 0.32 -0.32
88 AT1G21740 Protein of unknown function (DUF630 and DUF632) -0.63 0.31 -0.32
89 AT3G18120 F-box associated ubiquitination effector family protein -0.62 0.32 -0.3
90 AT4G31910 HXXXD-type acyl-transferase family protein -0.62 0.36 -0.31
91 AT4G17790 SNARE associated Golgi protein family -0.61 0.33 -0.3
92 AT4G19740 Glycosyl hydrolase superfamily protein -0.61 0.32 -0.31
93 AT2G26360 Mitochondrial substrate carrier family protein -0.61 0.32 -0.33
94 AT1G30100 nine-cis-epoxycarotenoid dioxygenase 5 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 5,
nine-cis-epoxycarotenoid
dioxygenase 5		 -0.61 0.31 -0.3
95 AT4G28010 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.34 -0.29
96 AT4G25010 Nodulin MtN3 family protein AtSWEET14, SWEET14 -0.6 0.29 -0.33
97 AT1G68460 isopentenyltransferase 1 Arabidopsis thaliana
isopentenyltransferase 1,
isopentenyltransferase 1		 -0.6 0.32 -0.31
98 AT5G39560 Galactose oxidase/kelch repeat superfamily protein -0.6 0.31 -0.33
99 AT5G45210 Disease resistance protein (TIR-NBS-LRR class) family -0.6 0.32 -0.29
100 AT1G51990 O-methyltransferase family protein -0.6 0.31 -0.31
101 AT3G26880 Plant self-incompatibility protein S1 family -0.59 0.31 -0.33
102 AT5G44330 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.31 -0.3
103 AT4G04420 transposable element gene -0.59 0.32 -0.3
104 AT5G13830 FtsJ-like methyltransferase family protein -0.58 0.32 -0.31
105 AT3G10100 transposable element gene -0.58 0.31 -0.32
106 AT5G06265 hyaluronan mediated motility receptor-related -0.58 0.3 -0.32
107 AT1G25270 nodulin MtN21 /EamA-like transporter family protein -0.58 0.3 -0.32
108 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.32
109 AT2G47020 Peptide chain release factor 1 -0.57 0.31 -0.28
110 AT2G22920 serine carboxypeptidase-like 12 serine carboxypeptidase-like 12 -0.57 0.3 -0.32
111 AT4G10640 IQ-domain 16 IQ-domain 16 -0.57 0.31 -0.33
112 AT1G04330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.31 -0.33
113 AT3G56380 response regulator 17 response regulator 17, response
regulator 17		 -0.57 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
114 C0207 Phosphatidylglycerol-34:5 - - - 0.66 0.49 -0.49