AT1G17745 : 3-phosphoglycerate dehydrogenase
Query Information
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AGICode AT1G17745
Description D-3-phosphoglycerate dehydrogenase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G17745 D-3-phosphoglycerate dehydrogenase 3-phosphoglycerate dehydrogenase 1 0.31 -0.34
2 AT4G02360 Protein of unknown function, DUF538 0.86 0.33 -0.3
3 AT1G52410 TSK-associating protein 1 TSK-associating protein 1 0.86 0.32 -0.33
4 AT2G30550 alpha/beta-Hydrolases superfamily protein 0.85 0.3 -0.32
5 AT4G34710 arginine decarboxylase 2 arginine decarboxylase 2, ATADC2,
SPE2		 0.85 0.33 -0.32
6 AT1G30570 hercules receptor kinase 2 hercules receptor kinase 2 -0.84 0.31 -0.31
7 AT3G44100 MD-2-related lipid recognition domain-containing protein 0.82 0.32 -0.31
8 AT5G42810 inositol-pentakisphosphate 2-kinase 1 inositol-pentakisphosphate
2-kinase 1,
inositol-pentakisphosphate
2-kinase 1		 0.82 0.32 -0.32
9 AT4G30810 serine carboxypeptidase-like 29 serine carboxypeptidase-like 29 0.82 0.3 -0.31
10 AT2G29460 glutathione S-transferase tau 4 glutathione S-transferase tau 4,
GLUTATHIONE S-TRANSFERASE 22,
glutathione S-transferase tau 4		 0.82 0.32 -0.3
11 AT1G23800 aldehyde dehydrogenase 2B7 aldehyde dehydrogenase 2B,
aldehyde dehydrogenase 2B7		 0.81 0.32 -0.33
12 AT5G53120 spermidine synthase 3 SPERMIDINE SYNTHASE 3, spermidine
synthase 3, SPMS		 0.81 0.3 -0.32
13 AT5G18130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.8 0.3 -0.34
14 AT2G39330 jacalin-related lectin 23 jacalin-related lectin 23 0.8 0.31 -0.32
15 AT3G16470 Mannose-binding lectin superfamily protein jacalin-related lectin 35,
JASMONATE RESPONSIVE 1		 0.8 0.32 -0.31
16 AT3G62390 TRICHOME BIREFRINGENCE-LIKE 6 TRICHOME BIREFRINGENCE-LIKE 6 -0.8 0.31 -0.33
17 AT5G27450 mevalonate kinase mevalonate kinase, MEVALONATE
KINASE		 -0.8 0.31 -0.3
18 AT1G54020 GDSL-like Lipase/Acylhydrolase superfamily protein 0.8 0.31 -0.32
19 AT1G68130 indeterminate(ID)-domain 14 indeterminate(ID)-domain 14,
indeterminate(ID)-domain 14,
IDD14alpha, IDD14beta		 -0.8 0.29 -0.33
20 AT3G11420 Protein of unknown function (DUF604) 0.8 0.31 -0.3
21 AT1G16880 uridylyltransferase-related ACT domain repeats 11 -0.79 0.32 -0.32
22 AT5G14700 NAD(P)-binding Rossmann-fold superfamily protein 0.79 0.31 -0.31
23 AT4G22920 non-yellowing 1 NON-YELLOWING 1, NON-YELLOWING 1 0.79 0.31 -0.31
24 AT2G34060 Peroxidase superfamily protein -0.79 0.31 -0.3
25 AT1G53800 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits
to 882 proteins in 242 species: Archae - 2; Bacteria - 216;
Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other
Eukaryotes - 493 (source: NCBI BLink).		 -0.79 0.3 -0.35
26 AT5G17620 CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1
(InterPro:IPR010604); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.79 0.33 -0.29
27 AT4G29130 hexokinase 1 ARABIDOPSIS THALIANA HEXOKINASE 1,
GLUCOSE INSENSITIVE 2, hexokinase
1		 0.79 0.33 -0.31
28 AT5G22640 MORN (Membrane Occupation and Recognition Nexus)
repeat-containing protein		 embryo defective 1211 -0.79 0.33 -0.31
29 AT5G54840 Ras-related small GTP-binding family protein ATSGP1, SGP1 0.79 0.29 -0.32
30 AT2G39030 Acyl-CoA N-acyltransferases (NAT) superfamily protein N-acetyltransferase activity 1 0.78 0.31 -0.31
31 AT2G33380 Caleosin-related family protein Arabidopsis thaliana caleosin 3,
caleosin 3, caleosin 3, RESPONSIVE
TO DESSICATION 20		 0.78 0.34 -0.33
32 AT1G11840 glyoxalase I homolog glyoxalase I homolog, glyoxalase I
homolog		 0.78 0.3 -0.31
33 AT1G02640 beta-xylosidase 2 BETA-XYLOSIDASE 2, beta-xylosidase
2		 -0.78 0.31 -0.32
34 AT1G69610 Protein of unknown function (DUF1666) 0.77 0.31 -0.32
35 AT3G13110 serine acetyltransferase 2;2 serine acetyltransferase 2;2,
SERINE ACETYLTRANSFERASE-1, SERINE
ACETYLTRANSFERASE A, SERINE
ACETYLTRANSFERASE-MITOCHONDRIAL,
SERINE ACETYLTRANSFERASE 3, serine
acetyltransferase 2;2		 0.77 0.32 -0.32
36 AT4G01070 UDP-Glycosyltransferase superfamily protein GT72B1, UDP-GLUCOSE-DEPENDENT
GLUCOSYLTRANSFERASE 72 B1		 0.77 0.31 -0.32
37 AT4G28570 Long-chain fatty alcohol dehydrogenase family protein 0.77 0.32 -0.32
38 AT1G64530 Plant regulator RWP-RK family protein -0.77 0.31 -0.32
39 AT5G41800 Transmembrane amino acid transporter family protein 0.77 0.32 -0.33
40 AT4G15530 pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase 0.77 0.31 -0.29
41 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 -0.77 0.32 -0.34
42 AT5G65870 phytosulfokine 5 precursor phytosulfokine 5 precursor, PSK5,
phytosulfokine 5 precursor		 0.77 0.31 -0.33
43 AT2G20630 PP2C induced by AVRRPM1 PP2C induced by AVRRPM1 0.77 0.32 -0.34
44 AT1G68795 CLAVATA3/ESR-RELATED 12 CLAVATA3/ESR-RELATED 12 0.77 0.32 -0.32
45 AT3G50630 KIP-related protein 2 ICK2, KIP-related protein 2 -0.77 0.32 -0.31
46 AT4G25990 CCT motif family protein CIL -0.77 0.3 -0.3
47 AT3G15850 fatty acid desaturase 5 ADS3, fatty acid desaturase 5,
FATTY ACID DESATURASE B, JB67		 -0.76 0.29 -0.3
48 AT2G22970 serine carboxypeptidase-like 11 serine carboxypeptidase-like 11 0.76 0.32 -0.28
49 AT2G43530 Scorpion toxin-like knottin superfamily protein 0.76 0.29 -0.31
50 AT1G31550 GDSL-like Lipase/Acylhydrolase superfamily protein 0.76 0.31 -0.32
51 AT4G29210 gamma-glutamyl transpeptidase 4 gamma-glutamyl transpeptidase 3,
gamma-glutamyl transpeptidase 4		 0.76 0.33 -0.29
52 AT3G23600 alpha/beta-Hydrolases superfamily protein 0.76 0.31 -0.32
53 AT5G52450 MATE efflux family protein 0.76 0.31 -0.34
54 AT2G42580 tetratricopetide-repeat thioredoxin-like 3 tetratricopetide-repeat
thioredoxin-like 3,
VHI-INTERACTING TPR CONTAINING
PROTEIN		 -0.75 0.31 -0.32
55 AT2G17500 Auxin efflux carrier family protein 0.75 0.32 -0.33
56 AT1G59700 glutathione S-transferase TAU 16 glutathione S-transferase TAU 16,
glutathione S-transferase TAU 16		 0.75 0.31 -0.33
57 AT3G06070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits
to 33 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.31 -0.3
58 AT5G02940 Protein of unknown function (DUF1012) 0.75 0.3 -0.32
59 AT2G39420 alpha/beta-Hydrolases superfamily protein 0.75 0.33 -0.33
60 AT1G04520 plasmodesmata-located protein 2 plasmodesmata-located protein 2 -0.75 0.3 -0.32
61 AT1G52400 beta glucosidase 18 A. THALIANA BETA-GLUCOSIDASE 1,
BETA-GLUCOSIDASE HOMOLOG 1, beta
glucosidase 18		 0.75 0.31 -0.29
62 AT2G42740 ribosomal protein large subunit 16A ribosomal protein large subunit
16A		 -0.75 0.29 -0.3
63 AT1G54030 GDSL-like Lipase/Acylhydrolase superfamily protein GOLGI DEFECTS 36, MODIFIED VACUOLE
PHENOTYPE 1		 0.75 0.31 -0.31
64 AT5G18570 GTP1/OBG family protein ATOBGC, OBG-like protein,
chloroplastic SAR1, EMBRYO
DEFECTIVE 269, EMBRYO DEFECTIVE
3138		 -0.75 0.31 -0.31
65 AT4G33250 eukaryotic translation initiation factor 3K ATTIF3K1, eukaryotic translation
initiation factor 3K, TIF3K1		 -0.75 0.3 -0.29
66 AT5G63140 purple acid phosphatase 29 purple acid phosphatase 29, PAP29,
purple acid phosphatase 29		 -0.75 0.33 -0.31
67 AT2G41990 CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant
protein, group 2 (InterPro:IPR004864); BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.74 0.32 -0.3
68 AT5G60990 DEA(D/H)-box RNA helicase family protein -0.74 0.31 -0.3
69 AT4G39030 MATE efflux family protein ENHANCED DISEASE SUSCEPTIBILITY 5,
susceptible to
coronatine-deficient Pst DC3000 3,
SALICYLIC ACID INDUCTION DEFICIENT
1		 0.74 0.3 -0.33
70 AT2G18940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.74 0.3 -0.28
71 AT5G58690 phosphatidylinositol-speciwc phospholipase C5 ATPLC5,
phosphatidylinositol-speciwc
phospholipase C5		 0.74 0.3 -0.32
72 AT1G52000 Mannose-binding lectin superfamily protein 0.74 0.33 -0.33
73 AT3G48020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.31 -0.32
74 AT1G55920 serine acetyltransferase 2;1 serine acetyltransferase 2;1,
SERINE ACETYLTRANSFERASE 1, SERINE
ACETYLTRANSFERASE 5, serine
acetyltransferase 2;1		 0.74 0.31 -0.31
75 AT5G02120 one helix protein one helix protein, PIGMENT
DEFECTIVE 335		 -0.74 0.33 -0.32
76 AT2G04400 Aldolase-type TIM barrel family protein 0.74 0.31 -0.31
77 AT3G03310 lecithin:cholesterol acyltransferase 3 ARABIDOPSIS LECITHIN:CHOLESTEROL
ACYLTRANSFERASE 3,
lecithin:cholesterol
acyltransferase 3		 0.74 0.32 -0.3
78 AT2G30360 SOS3-interacting protein 4 CBL-INTERACTING PROTEIN KINASE 11,
PROTEIN KINASE SOS2-LIKE 5,
SOS3-interacting protein 4,
SNF1-RELATED PROTEIN KINASE 3.22		 0.73 0.34 -0.31
79 AT4G17470 alpha/beta-Hydrolases superfamily protein 0.73 0.29 -0.32
80 AT3G14060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits
to 30 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.33 -0.32
81 AT3G62580 Late embryogenesis abundant protein (LEA) family protein 0.73 0.32 -0.33
82 AT2G36990 RNApolymerase sigma-subunit F SIGMA FACTOR 6, SIGMA FACTOR 6,
RNApolymerase sigma-subunit F,
SOLDAT8		 -0.73 0.31 -0.3
83 AT3G07510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits
to 133 proteins in 14 species: Archae - 0; Bacteria - 4;
Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.32 -0.31
84 AT1G48000 myb domain protein 112 myb domain protein 112, myb domain
protein 112		 0.73 0.32 -0.31
85 AT3G21230 4-coumarate:CoA ligase 5 4-coumarate:CoA ligase 5 0.73 0.29 -0.3
86 AT5G24330 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 6, SET DOMAIN PROTEIN 34		 -0.73 0.32 -0.29
87 AT3G22200 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 GAMMA-AMINOBUTYRATE TRANSAMINASE,
HEXENAL RESPONSE1, POLLEN-PISTIL
INCOMPATIBILITY 2		 0.73 0.31 -0.3
88 AT3G46450 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 0.73 0.3 -0.32
89 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 0.73 0.32 -0.32
90 AT1G71960 ATP-binding casette family G25 ATP-binding casette G25,
Arabidopsis thaliana ATP-binding
cassette G25		 0.73 0.31 -0.3
91 AT1G74800 Galactosyltransferase family protein -0.73 0.34 -0.31
92 AT1G17830 Protein of unknown function (DUF789) 0.73 0.31 -0.3
93 AT5G16715 ATP binding;valine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 embryo defective 2247 -0.73 0.33 -0.32
94 AT1G20010 tubulin beta-5 chain tubulin beta-5 chain -0.72 0.31 -0.33
95 AT3G16260 tRNAse Z4 tRNAse Z4 -0.72 0.29 -0.32
96 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 -0.72 0.29 -0.32
97 AT5G07590 Transducin/WD40 repeat-like superfamily protein -0.72 0.32 -0.34
98 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 -0.72 0.31 -0.31
99 AT5G48630 Cyclin family protein -0.72 0.32 -0.31
100 AT1G80380 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.72 0.31 -0.31
101 AT1G48780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G18300.1); Has 89 Blast hits
to 89 proteins in 11 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.72 0.3 -0.29
102 AT5G57780 EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12
growth stages; BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in
11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 P1R1 -0.71 0.33 -0.3
103 AT4G34290 SWIB/MDM2 domain superfamily protein -0.71 0.32 -0.31
104 AT5G13140 Pollen Ole e 1 allergen and extensin family protein -0.71 0.32 -0.32
105 AT3G06750 hydroxyproline-rich glycoprotein family protein -0.71 0.32 -0.31
106 AT2G18290 anaphase promoting complex 10 anaphase promoting complex 10,
EMBRYO DEFECTIVE 2783		 -0.71 0.31 -0.29
107 AT1G11290 Pentatricopeptide repeat (PPR) superfamily protein CHLORORESPIRATORY REDUCTION22 -0.71 0.32 -0.31
108 AT3G23880 F-box and associated interaction domains-containing protein -0.71 0.3 -0.33
109 AT1G14710 hydroxyproline-rich glycoprotein family protein -0.71 0.32 -0.33
110 AT5G51140 Pseudouridine synthase family protein -0.71 0.28 -0.31
111 AT4G30130 Protein of unknown function (DUF630 and DUF632) -0.71 0.31 -0.35
112 AT5G13100 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.71 0.34 -0.34
113 AT5G59750 DHBP synthase RibB-like alpha/beta domain;GTP
cyclohydrolase II		 -0.71 0.29 -0.32
114 AT4G30720 FAD/NAD(P)-binding oxidoreductase family protein PIGMENT DEFECTIVE 327 -0.71 0.32 -0.32
115 AT5G55280 homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 ARABIDOPSIS THALIANA HOMOLOG OF
BACTERIAL CYTOKINESIS Z-RING
PROTEIN FTSZ 1-1, CHLOROPLAST
FTSZ, homolog of bacterial
cytokinesis Z-ring protein FTSZ
1-1		 -0.71 0.31 -0.29
116 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 -0.71 0.31 -0.3
117 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.7 0.33 -0.32
118 AT3G50560 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.32 -0.29
119 AT4G09800 S18 ribosomal protein S18 ribosomal protein -0.7 0.34 -0.32
120 AT4G25750 ABC-2 type transporter family protein ATP-binding cassette G4 -0.7 0.33 -0.3
121 AT1G13640 Phosphatidylinositol 3- and 4-kinase family protein -0.7 0.32 -0.31
122 AT2G29260 NAD(P)-binding Rossmann-fold superfamily protein -0.7 0.31 -0.31
123 AT5G60710 Zinc finger (C3HC4-type RING finger) family protein -0.7 0.32 -0.31
124 AT5G02440 unknown protein; Has 71 Blast hits to 71 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.3 -0.33
125 AT3G13740 Ribonuclease III family protein -0.7 0.31 -0.33
126 AT1G12500 Nucleotide-sugar transporter family protein -0.7 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
127 C0217 Putative glucosinole - - - -0.84 0.46 -0.4
128 C0050 8-Methylthio-n-octylglucosinolate - 8-Methylthiooctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine -0.76 0.44 -0.45 C0050
129 C0153 Monogalactosyldiacylgycerol-34:6 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.7 0.45 -0.47 C0153