AT1G13910 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G13910
Description Leucine-rich repeat (LRR) family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G13910 Leucine-rich repeat (LRR) family protein 1 0.3 -0.32
2 AT3G50380 Protein of unknown function (DUF1162) 0.85 0.32 -0.28
3 AT5G46190 RNA-binding KH domain-containing protein 0.78 0.32 -0.34
4 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.77 0.32 -0.33
5 AT2G39340 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3A, yeast Sac3 homolog A 0.76 0.32 -0.31
6 AT1G79950 RAD3-like DNA-binding helicase protein 0.74 0.32 -0.32
7 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.74 0.32 -0.3
8 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain 0.73 0.31 -0.3
9 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 0.73 0.3 -0.31
10 AT5G24740 Protein of unknown function (DUF1162) 0.72 0.32 -0.31
11 AT2G20480 unknown protein; Has 19 Blast hits to 19 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.31 -0.31
12 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.71 0.31 -0.32
13 AT1G36160 acetyl-CoA carboxylase 1 acetyl-CoA carboxylase 1, AT-ACC1,
EMBRYO DEFECTIVE 22, GURKE,
GLOSSYHEAD 1, PASTICCINO 3		 0.71 0.32 -0.32
14 AT1G79280 nuclear pore anchor TRANSLOCATED PROMOTER REGION,
nuclear pore anchor		 0.71 0.32 -0.32
15 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.31 -0.3
16 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.71 0.32 -0.3
17 AT4G20780 calmodulin like 42 calmodulin like 42 -0.7 0.32 -0.33
18 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 -0.7 0.32 -0.32
19 AT3G22380 time for coffee TIME FOR COFFEE 0.7 0.3 -0.32
20 AT4G33210 F-box family protein SLOW MOTION 0.7 0.32 -0.32
21 AT1G10570 Cysteine proteinases superfamily protein OVERLY TOLERANT TO SALT 2, UB-LIKE
PROTEASE 1C		 0.69 0.3 -0.29
22 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.69 0.33 -0.33
23 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 0.69 0.32 -0.3
24 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.69 0.32 -0.34
25 AT1G76580 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.69 0.3 -0.32
26 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.69 0.33 -0.32
27 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.68 0.29 -0.33
28 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.68 0.29 -0.32
29 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.68 0.29 -0.33
30 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 0.68 0.31 -0.32
31 AT2G43600 Chitinase family protein -0.68 0.32 -0.33
32 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 0.68 0.32 -0.31
33 AT4G27270 Quinone reductase family protein -0.68 0.31 -0.3
34 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 0.68 0.31 -0.34
35 AT1G02080 transcription regulators 0.68 0.3 -0.3
36 AT1G22310 methyl-CPG-binding domain 8 ATMBD8, methyl-CPG-binding domain
8		 0.68 0.31 -0.3
37 AT5G35180 Protein of unknown function (DUF1336) 0.68 0.31 -0.32
38 AT5G09880 Splicing factor, CC1-like 0.68 0.32 -0.32
39 AT5G60950 COBRA-like protein 5 precursor COBRA-like protein 5 precursor -0.67 0.3 -0.3
40 AT3G22540 Protein of unknown function (DUF1677) -0.67 0.31 -0.33
41 AT3G07274 unknown pseudogene 0.67 0.3 -0.31
42 AT1G55970 histone acetyltransferase of the CBP family 4 HAC04, histone acetyltransferase
of the CBP family 4, HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 6, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 04, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 4		 0.67 0.32 -0.31
43 AT4G12020 protein kinase family protein ATWRKY19, MITOGEN-ACTIVATED
PROTEIN KINASE KINASE KINASE 11,
MAPK/ERK KINASE KINASE 4, WRKY19		 0.67 0.31 -0.32
44 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.67 0.31 -0.33
45 AT5G43310 COP1-interacting protein-related 0.67 0.31 -0.31
46 AT4G14600 Target SNARE coiled-coil domain protein -0.66 0.33 -0.31
47 AT5G28630 glycine-rich protein -0.66 0.32 -0.31
48 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.66 0.31 -0.3
49 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 0.66 0.32 -0.32
50 AT3G19960 myosin 1 myosin 1 0.66 0.34 -0.31
51 AT3G01310 Phosphoglycerate mutase-like family protein 0.66 0.32 -0.3
52 AT3G26560 ATP-dependent RNA helicase, putative 0.66 0.3 -0.32
53 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.66 0.33 -0.31
54 AT4G25580 CAP160 protein 0.66 0.33 -0.29
55 AT5G22760 PHD finger family protein 0.66 0.32 -0.32
56 AT5G20380 phosphate transporter 4;5 phosphate transporter 4;5 0.66 0.3 -0.35
57 AT4G14410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 104 -0.66 0.33 -0.33
58 AT4G34040 RING/U-box superfamily protein 0.65 0.31 -0.33
59 AT4G32620 Enhancer of polycomb-like transcription factor protein 0.65 0.32 -0.31
60 AT5G20840 Phosphoinositide phosphatase family protein 0.65 0.31 -0.31
61 AT2G26240 Transmembrane proteins 14C -0.65 0.31 -0.31
62 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 0.65 0.3 -0.31
63 AT1G02360 Chitinase family protein -0.65 0.31 -0.34
64 AT1G50720 Stigma-specific Stig1 family protein -0.65 0.3 -0.33
65 AT2G41280 late embryogenesis abundant protein (M10) / LEA protein M10 ATM10, M10 0.65 0.29 -0.32
66 AT2G43800 Actin-binding FH2 (formin homology 2) family protein 0.65 0.31 -0.35
67 AT5G47040 lon protease 2 lon protease 2 0.64 0.31 -0.31
68 AT2G40930 ubiquitin-specific protease 5 ATUBP5, PIGMENT DEFECTIVE EMBRYO
323, ubiquitin-specific protease 5		 0.64 0.3 -0.33
69 AT1G27630 cyclin T 1;3 cyclin T 1;3 0.64 0.31 -0.33
70 AT5G47020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.31 -0.31
71 AT5G07290 MEI2-like 4 MEI2-like 4, MEI2-like 4 0.64 0.33 -0.3
72 AT4G18130 phytochrome E phytochrome E 0.64 0.32 -0.31
73 AT5G55240 ARABIDOPSIS THALIANA PEROXYGENASE 2 ARABIDOPSIS THALIANA PEROXYGENASE
2		 0.64 0.28 -0.3
74 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 0.64 0.33 -0.31
75 AT1G63490 transcription factor jumonji (jmjC) domain-containing
protein		 0.63 0.31 -0.32
76 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.63 0.3 -0.31
77 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.63 0.33 -0.32
78 AT5G19630 alpha/beta-Hydrolases superfamily protein -0.63 0.31 -0.31
79 AT5G51470 Auxin-responsive GH3 family protein -0.63 0.3 -0.33
80 AT1G77600 ARM repeat superfamily protein 0.63 0.33 -0.31
81 AT4G35780 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase
17		 0.63 0.35 -0.33
82 AT2G03150 ATP/GTP-binding protein family embryo defective 1579 0.63 0.31 -0.32
83 AT1G63150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.32 -0.32
84 AT2G46560 transducin family protein / WD-40 repeat family protein 0.63 0.31 -0.32
85 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 0.63 0.31 -0.32
86 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.63 0.3 -0.31
87 AT2G37840 Protein kinase superfamily protein 0.63 0.3 -0.33
88 AT3G20910 nuclear factor Y, subunit A9 nuclear factor Y, subunit A9 0.63 0.3 -0.31
89 AT5G45610 protein dimerizations SENSITIVE TO UV 2 0.62 0.31 -0.32
90 AT1G29080 Papain family cysteine protease 0.62 0.32 -0.3
91 AT2G36810 ARM repeat superfamily protein 0.62 0.32 -0.33
92 AT1G60860 ARF-GAP domain 2 ARF-GAP domain 2 0.62 0.31 -0.31
93 AT1G71030 MYB-like 2 ARABIDOPSIS MYB-LIKE 2, MYB-like 2 0.62 0.3 -0.32
94 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.62 0.33 -0.33
95 AT4G39560 Galactose oxidase/kelch repeat superfamily protein 0.62 0.3 -0.34
96 AT4G02810 Protein of unknown function (DUF3049) FANTASTIC FOUR 1 -0.62 0.31 -0.3
97 AT3G10070 TBP-associated factor 12 TBP-associated factor 12,
TATA-ASSOCIATED FACTOR II 58		 0.62 0.32 -0.29
98 AT5G04460 RING/U-box superfamily protein 0.62 0.31 -0.32
99 AT1G53100 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.62 0.3 -0.3
100 AT3G48750 cell division control 2 cell division control 2, CDC2A,
CDC2AAT, CDK2, CDKA1, CDKA;1		 -0.61 0.3 -0.33
101 AT2G41290 strictosidine synthase-like 2 strictosidine synthase-like 2 -0.61 0.32 -0.32
102 AT5G05610 alfin-like 1 alfin-like 1 -0.61 0.31 -0.31
103 AT4G24560 ubiquitin-specific protease 16 ubiquitin-specific protease 16 0.61 0.3 -0.3
104 AT1G50200 Alanyl-tRNA synthetase ACD, Alanyl-tRNA synthetase 0.61 0.33 -0.33
105 AT2G04650 ADP-glucose pyrophosphorylase family protein -0.61 0.33 -0.31
106 AT5G08160 serine/threonine protein kinase 3 serine/threonine protein kinase 3,
serine/threonine protein kinase 3		 -0.61 0.3 -0.32
107 AT4G32551 LisH dimerisation motif;WD40/YVTN repeat-like-containing
domain		 LEUNIG, ROTUNDA 2 0.61 0.32 -0.32
108 AT5G39020 Malectin/receptor-like protein kinase family protein -0.61 0.33 -0.32
109 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.61 0.31 -0.32
110 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.61 0.31 -0.34
111 AT5G24580 Heavy metal transport/detoxification superfamily protein -0.61 0.33 -0.29
112 AT5G04290 kow domain-containing transcription factor 1 kow domain-containing
transcription factor 1, SPT5-LIKE		 0.6 0.31 -0.31
113 AT4G36030 armadillo repeat only 3 armadillo repeat only 3 -0.6 0.3 -0.35
114 AT2G31110 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 40 -0.6 0.32 -0.31
115 AT4G31020 alpha/beta-Hydrolases superfamily protein -0.6 0.28 -0.31
116 AT1G03850 Glutaredoxin family protein glutaredoxin 13, glutaredoxin 13 -0.6 0.3 -0.32
117 AT1G15200 protein-protein interaction regulator family protein 0.6 0.33 -0.32
118 AT2G25660 embryo defective 2410 embryo defective 2410 0.6 0.34 -0.3
119 AT4G31410 Protein of unknown function (DUF1644) 0.6 0.31 -0.3
120 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.6 0.31 -0.32
121 AT1G07910 RNAligase AtRLG1, ARABIDOPSIS THALIANA RNA
LIGASE, RNAligase		 0.6 0.32 -0.32
122 AT1G21650 Preprotein translocase SecA family protein SECA2 0.6 0.32 -0.3
123 AT3G62280 GDSL-like Lipase/Acylhydrolase superfamily protein -0.59 0.32 -0.34
124 AT1G20050 C-8,7 sterol isomerase HYDRA1 -0.59 0.29 -0.32
125 AT2G04460 transposable element gene -0.59 0.33 -0.31
126 AT3G09020 alpha 1,4-glycosyltransferase family protein -0.57 0.31 -0.33
127 AT2G35210 root and pollen arfgap AGD10, MATERNAL EFFECT EMBRYO
ARREST 28, root and pollen arfgap		 -0.57 0.32 -0.31
128 AT4G18510 CLAVATA3/ESR-related 2 CLAVATA3/ESR-related 2 -0.57 0.33 -0.32
129 AT5G20680 TRICHOME BIREFRINGENCE-LIKE 16 TRICHOME BIREFRINGENCE-LIKE 16 -0.57 0.3 -0.32
130 AT3G32060 transposable element gene -0.56 0.35 -0.3
131 AT2G26400 acireductone dioxygenase 3 ACIREDUCTONE DIOXYGENASE,
acireductone dioxygenase 3,
acireductone dioxygenase 3		 -0.56 0.33 -0.3
132 AT3G07340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.56 0.36 -0.31
133 AT1G70990 proline-rich family protein -0.56 0.29 -0.32
134 AT5G06610 Protein of unknown function (DUF620) -0.55 0.35 -0.33
135 AT3G24503 aldehyde dehydrogenase 2C4 aldehyde dehydrogenase 1A,
aldehyde dehydrogenase 2C4,
REDUCED EPIDERMAL FLUORESCENCE1		 -0.55 0.3 -0.33
136 AT3G55960 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.55 0.33 -0.31
137 AT5G11540 D-arabinono-1,4-lactone oxidase family protein -0.54 0.33 -0.32
138 AT5G51840 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.54 0.32 -0.31
139 AT4G38550 Arabidopsis phospholipase-like protein (PEARLI 4) family -0.54 0.32 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
140 C0103 Glutaric acid - - - -0.68 0.46 -0.46