AT1G01520 : ALTERED SEED GERMINATION 4
Query Information
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AGICode AT1G01520
Description Homeodomain-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G01520 Homeodomain-like superfamily protein ALTERED SEED GERMINATION 4 1 0.29 -0.33
2 AT4G08460 Protein of unknown function (DUF1644) -0.79 0.33 -0.31
3 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 0.76 0.31 -0.3
4 AT3G19620 Glycosyl hydrolase family protein 0.74 0.34 -0.3
5 AT1G14060 GCK domain-containing protein -0.73 0.31 -0.33
6 AT5G67030 zeaxanthin epoxidase (ZEP) (ABA1) ABA DEFICIENT 1, ARABIDOPSIS
THALIANA ABA DEFICIENT 1,
ARABIDOPSIS THALIANA ZEAXANTHIN
EPOXIDASE, IMPAIRED IN
BABA-INDUCED STERILITY 3, LOW
EXPRESSION OF OSMOTIC
STRESS-RESPONSIVE GENES 6,
NON-PHOTOCHEMICAL QUENCHING 2,
ZEAXANTHIN EPOXIDASE		 0.73 0.32 -0.3
7 AT5G26110 Protein kinase superfamily protein -0.72 0.3 -0.31
8 AT2G41870 Remorin family protein 0.71 0.31 -0.32
9 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 -0.71 0.34 -0.31
10 AT4G19410 Pectinacetylesterase family protein -0.71 0.33 -0.32
11 AT5G20400 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.7 0.31 -0.32
12 AT1G02205 Fatty acid hydroxylase superfamily ECERIFERUM 1 0.7 0.34 -0.31
13 AT5G57610 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.7 0.33 -0.32
14 AT1G75090 DNA glycosylase superfamily protein 0.7 0.34 -0.32
15 AT5G01670 NAD(P)-linked oxidoreductase superfamily protein 0.69 0.33 -0.3
16 AT5G45950 GDSL-like Lipase/Acylhydrolase superfamily protein 0.69 0.32 -0.31
17 AT5G47640 nuclear factor Y, subunit B2 nuclear factor Y, subunit B2 0.69 0.31 -0.33
18 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.33 -0.31
19 AT5G57040 Lactoylglutathione lyase / glyoxalase I family protein 0.69 0.29 -0.32
20 AT1G73390 Endosomal targeting BRO1-like domain-containing protein 0.68 0.33 -0.31
21 AT1G01900 subtilase family protein ATSBT1.1, SBTI1.1 0.68 0.31 -0.33
22 AT3G02190 Ribosomal protein L39 family protein -0.68 0.33 -0.32
23 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 -0.68 0.32 -0.32
24 AT4G16750 Integrase-type DNA-binding superfamily protein 0.68 0.32 -0.31
25 AT1G10640 Pectin lyase-like superfamily protein 0.67 0.32 -0.31
26 AT2G29530 Tim10/DDP family zinc finger protein TIM10 -0.67 0.32 -0.3
27 AT4G31180 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 -0.67 0.33 -0.31
28 AT5G41010 DNA directed RNA polymerase, 7 kDa subunit NRPB12, NRPD12, NRPE12 -0.67 0.32 -0.32
29 AT5G20270 heptahelical transmembrane protein1 heptahelical transmembrane
protein1		 0.67 0.3 -0.32
30 AT1G60690 NAD(P)-linked oxidoreductase superfamily protein 0.67 0.31 -0.32
31 AT1G04830 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.67 0.29 -0.32
32 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 0.67 0.32 -0.33
33 AT3G43220 Phosphoinositide phosphatase family protein 0.67 0.32 -0.32
34 AT3G03420 Ku70-binding family protein -0.67 0.31 -0.31
35 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.3 -0.33
36 AT5G47800 Phototropic-responsive NPH3 family protein 0.67 0.31 -0.33
37 AT3G51830 SAC domain-containing protein 8 ATG5, SAC domain-containing
protein 8		 0.66 0.31 -0.32
38 AT5G18420 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2363
(InterPro:IPR019312); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.66 0.33 -0.31
39 AT1G18810 phytochrome kinase substrate-related 0.66 0.32 -0.32
40 AT3G06330 RING/U-box superfamily protein 0.66 0.3 -0.31
41 AT3G10080 RmlC-like cupins superfamily protein 0.66 0.35 -0.31
42 AT1G15080 lipid phosphate phosphatase 2 LIPID PHOSPHATE PHOSPHATASE 2,
PHOSPHATIDIC ACID PHOSPHATASE 2,
lipid phosphate phosphatase 2		 0.66 0.33 -0.32
43 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 -0.65 0.34 -0.35
44 AT5G15630 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE4, IRREGULAR XYLEM 6 0.65 0.32 -0.33
45 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.31 -0.3
46 AT3G15357 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: shoot apex,
hypocotyl, root, leaf; Has 6931 Blast hits to 2036 proteins
in 230 species: Archae - 7; Bacteria - 933; Metazoa - 1824;
Fungi - 836; Plants - 482; Viruses - 218; Other Eukaryotes
- 2631 (source: NCBI BLink).		 -0.65 0.31 -0.34
47 AT1G80720 Mitochondrial glycoprotein family protein -0.65 0.32 -0.31
48 AT5G09270 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.33 -0.32
49 AT4G27640 ARM repeat superfamily protein -0.64 0.28 -0.3
50 AT2G18330 AAA-type ATPase family protein -0.64 0.33 -0.29
51 AT1G61570 translocase of the inner mitochondrial membrane 13 translocase of the inner
mitochondrial membrane 13		 -0.64 0.33 -0.31
52 AT4G15850 RNA helicase 1 RNA helicase 1, RNA helicase 1 -0.64 0.31 -0.33
53 AT3G20430 CONTAINS InterPro DOMAIN/s: Phosphorylated adapter RNA
export protein, RNA-binding domain (InterPro:IPR019385);
Has 110 Blast hits to 110 proteins in 51 species: Archae -
0; Bacteria - 3; Metazoa - 56; Fungi - 0; Plants - 36;
Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).		 -0.64 0.31 -0.33
54 AT2G19385 zinc ion binding -0.64 0.32 -0.32
55 AT5G60730 Anion-transporting ATPase -0.64 0.31 -0.3
56 AT5G10930 CBL-interacting protein kinase 5 CBL-interacting protein kinase 5,
SNF1-RELATED PROTEIN KINASE 3.24		 0.64 0.29 -0.31
57 AT5G67220 FMN-linked oxidoreductases superfamily protein -0.64 0.32 -0.32
58 AT3G28910 myb domain protein 30 ATMYB30, myb domain protein 30 -0.64 0.31 -0.3
59 AT1G22640 myb domain protein 3 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 3, myb domain protein 3		 0.64 0.29 -0.34
60 AT4G30630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G57910.1); Has 33 Blast hits
to 33 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.32
61 AT1G14300 ARM repeat superfamily protein -0.63 0.32 -0.33
62 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.63 0.34 -0.3
63 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 -0.63 0.31 -0.32
64 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.32 -0.31
65 AT2G44270 repressor of lrx1 repressor of lrx1 -0.63 0.3 -0.31
66 AT1G15340 methyl-CPG-binding domain 10 methyl-CPG-binding domain 10 0.63 0.31 -0.31
67 AT3G04600 Nucleotidylyl transferase superfamily protein -0.63 0.32 -0.33
68 AT2G44230 Plant protein of unknown function (DUF946) 0.62 0.34 -0.3
69 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 0.62 0.31 -0.34
70 AT5G04970 Plant invertase/pectin methylesterase inhibitor superfamily -0.62 0.29 -0.32
71 AT5G13890 Family of unknown function (DUF716) -0.62 0.32 -0.32
72 AT5G46830 NACL-inducible gene 1 NACL-INDUCIBLE GENE 1,
NACL-inducible gene 1		 0.62 0.36 -0.3
73 AT5G66690 UDP-Glycosyltransferase superfamily protein UGT72E2 -0.62 0.32 -0.32
74 AT4G17695 Homeodomain-like superfamily protein KANADI 3 0.62 0.31 -0.31
75 AT4G37660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.62 0.31 -0.3
76 AT1G59940 response regulator 3 response regulator 3 -0.61 0.3 -0.33
77 AT5G13830 FtsJ-like methyltransferase family protein -0.61 0.3 -0.33
78 AT3G62810 complex 1 family protein / LVR family protein -0.61 0.32 -0.33
79 AT3G12030 Protein of unknown function DUF106, transmembrane -0.61 0.29 -0.32
80 AT3G21740 Arabidopsis thaliana protein of unknown function (DUF794) ACCUMULATION OF PHOTOSYSTEM ONE 4 -0.61 0.32 -0.3
81 AT4G17010 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.32 -0.29
82 AT3G48570 secE/sec61-gamma protein transport protein -0.61 0.31 -0.3
83 AT1G52200 PLAC8 family protein -0.61 0.29 -0.32
84 AT2G44510 CDK inhibitor P21 binding protein -0.61 0.31 -0.31
85 AT1G73180 Eukaryotic translation initiation factor eIF2A family
protein		 -0.6 0.32 -0.32
86 AT1G04900 Protein of unknown function (DUF185) -0.6 0.31 -0.31
87 AT3G10340 phenylalanine ammonia-lyase 4 phenylalanine ammonia-lyase 4 0.6 0.29 -0.31
88 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 0.6 0.31 -0.29
89 AT4G03560 two-pore channel 1 CALCIUM CHANNEL 1, two-pore
channel 1, FATTY ACID OXYGENATION
UPREGULATED 2, TPC1, two-pore
channel 1		 0.6 0.33 -0.32
90 AT5G64120 Peroxidase superfamily protein -0.59 0.31 -0.34
91 AT1G64185 Lactoylglutathione lyase / glyoxalase I family protein -0.59 0.31 -0.31
92 AT1G19600 pfkB-like carbohydrate kinase family protein -0.59 0.32 -0.31
93 AT2G44065 Ribosomal protein L2 family -0.59 0.31 -0.3
94 AT5G62740 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 ATHIR1, AtHIR4,
HYPERSENSITIVE-INDUCED RESPONSE
PROTEIN 1, hypersensitive induced
reaction 4		 -0.59 0.32 -0.31
95 AT3G58180 ARM repeat superfamily protein -0.59 0.31 -0.29
96 AT1G69850 nitrate transporter 1:2 nitrate transporter 1:2, nitrate
transporter 1:2, NTL1		 -0.59 0.29 -0.31
97 AT4G24940 SUMO-activating enzyme 1A AT-SAE1-1, SUMO-ACTIVATING ENZYME
1A, SUMO-activating enzyme 1A		 -0.59 0.33 -0.32
98 AT5G48150 GRAS family transcription factor phytochrome a signal transduction
1		 0.59 0.32 -0.32
99 AT4G01280 Homeodomain-like superfamily protein 0.58 0.32 -0.32
100 AT1G26290 unknown protein; Has 126 Blast hits to 112 proteins in 36
species: Archae - 0; Bacteria - 6; Metazoa - 14; Fungi - 3;
Plants - 14; Viruses - 0; Other Eukaryotes - 89 (source:
NCBI BLink).		 0.58 0.32 -0.3
101 AT1G75710 C2H2-like zinc finger protein 0.58 0.33 -0.33