AT1G13790 : factor of DNA methylation 4
Query Information
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AGICode AT1G13790
Description XH/XS domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G13790 XH/XS domain-containing protein factor of DNA methylation 4 1 0.33 -0.32
2 AT2G36430 Plant protein of unknown function (DUF247) 0.87 0.32 -0.31
3 AT2G18480 Major facilitator superfamily protein -0.85 0.32 -0.31
4 AT1G02970 WEE1 kinase homolog ATWEE1, WEE1 kinase homolog 0.85 0.3 -0.3
5 AT5G09240 ssDNA-binding transcriptional regulator 0.85 0.32 -0.32
6 AT1G68520 B-box type zinc finger protein with CCT domain 0.84 0.31 -0.3
7 AT1G30400 multidrug resistance-associated protein 1 ATP-binding cassette C1,
Arabidopsis thaliana ATP-binding
cassette C1, ARABIDOPSIS THALIANA
MULTIDRUG RESISTANCE-ASSOCIATED
PROTEIN 1, EST1, multidrug
resistance-associated protein 1		 -0.84 0.33 -0.28
8 AT1G17700 prenylated RAB acceptor 1.F1 prenylated RAB acceptor 1.F1 0.84 0.31 -0.3
9 AT3G45160 Putative membrane lipoprotein 0.84 0.33 -0.34
10 AT1G70480 Domain of unknown function (DUF220) -0.84 0.33 -0.34
11 AT4G24670 tryptophan aminotransferase related 2 tryptophan aminotransferase
related 2		 0.84 0.31 -0.33
12 AT4G14540 nuclear factor Y, subunit B3 nuclear factor Y, subunit B3 0.84 0.31 -0.32
13 AT2G26780 ARM repeat superfamily protein -0.83 0.29 -0.31
14 AT1G70410 beta carbonic anhydrase 4 BETA CARBONIC ANHYDRASE 4, beta
carbonic anhydrase 4, BETA
CARBONIC ANHYDRASE 4		 0.83 0.34 -0.31
15 AT2G18300 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.83 0.34 -0.31
16 AT3G62410 CP12 domain-containing protein 2 CP12 DOMAIN-CONTAINING PROTEIN 1,
CP12 domain-containing protein 2		 0.82 0.31 -0.31
17 AT5G64250 Aldolase-type TIM barrel family protein -0.82 0.3 -0.29
18 AT2G04790 unknown protein; Has 45 Blast hits to 45 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 43; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.82 0.32 -0.33
19 AT4G02940 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.82 0.32 -0.31
20 AT4G15100 serine carboxypeptidase-like 30 serine carboxypeptidase-like 30 -0.81 0.32 -0.3
21 AT1G78210 alpha/beta-Hydrolases superfamily protein -0.81 0.32 -0.3
22 AT5G51070 Clp ATPase CLPD, EARLY RESPONSIVE TO
DEHYDRATION 1, SENESCENCE
ASSOCIATED GENE 15		 -0.81 0.33 -0.32
23 AT1G54180 BREVIS RADIX-like 3 ARABIDOPSIS THALIANA BREVIS
RADIX-LIKE 3, BREVIS RADIX-like 3		 0.81 0.31 -0.32
24 AT3G50760 galacturonosyltransferase-like 2 galacturonosyltransferase-like 2 -0.81 0.31 -0.3
25 AT1G68820 Transmembrane Fragile-X-F-associated protein -0.8 0.28 -0.33
26 AT2G29990 alternative NAD(P)H dehydrogenase 2 alternative NAD(P)H dehydrogenase
2		 -0.8 0.32 -0.29
27 AT1G61390 S-locus lectin protein kinase family protein 0.8 0.31 -0.31
28 AT5G45900 ThiF family protein AUTOPHAGY 7, ATAPG7, ATATG7,
AUTOPHAGY-RELATED 7		 -0.8 0.3 -0.32
29 AT2G26230 uricase / urate oxidase / nodulin 35, putative -0.79 0.33 -0.3
30 AT4G32250 Protein kinase superfamily protein -0.79 0.28 -0.31
31 AT1G75850 VPS35 homolog B VPS35 homolog B -0.79 0.33 -0.32
32 AT2G41560 autoinhibited Ca(2+)-ATPase, isoform 4 autoinhibited Ca(2+)-ATPase,
isoform 4		 0.79 0.33 -0.34
33 AT1G60610 SBP (S-ribonuclease binding protein) family protein -0.79 0.3 -0.32
34 AT5G47120 BAX inhibitor 1 ARABIDOPSIS BAX INHIBITOR 1, BAX
inhibitor 1, BI-1, BAX inhibitor 1		 -0.79 0.33 -0.31
35 AT2G47800 multidrug resistance-associated protein 4 ATP-binding cassette C4, multidrug
resistance-associated protein 4,
EST3, multidrug
resistance-associated protein 4		 -0.79 0.32 -0.33
36 AT1G17620 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.79 0.33 -0.32
37 AT5G65010 asparagine synthetase 2 asparagine synthetase 2 0.79 0.3 -0.32
38 AT5G44900 Toll-Interleukin-Resistance (TIR) domain family protein 0.78 0.31 -0.31
39 AT4G11380 Adaptin family protein -0.78 0.31 -0.32
40 AT2G38170 cation exchanger 1 ATCAX1, cation exchanger 1, RARE
COLD INDUCIBLE 4		 0.78 0.29 -0.35
41 AT5G16910 cellulose-synthase like D2 ATCSLD2, cellulose-synthase like
D2		 -0.78 0.3 -0.31
42 AT1G16470 proteasome subunit PAB1 proteasome subunit PAB1 -0.78 0.32 -0.33
43 AT5G46350 WRKY DNA-binding protein 8 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 8, WRKY
DNA-binding protein 8		 -0.78 0.31 -0.34
44 AT2G39510 nodulin MtN21 /EamA-like transporter family protein 0.78 0.32 -0.29
45 AT5G39040 transporter associated with antigen processing protein 2 ATP-binding cassette B27, ALUMINUM
SENSITIVE 1, AtALS1, ARABIDOPSIS
THALIANA TRANSPORTER ASSOCIATED
WITH ANTIGEN PROCESSING PROTEIN 2,
transporter associated with
antigen processing protein 2		 -0.78 0.31 -0.31
46 AT5G35980 yeast YAK1-related gene 1 yeast YAK1-related gene 1 -0.78 0.31 -0.33
47 AT3G08990 Yippee family putative zinc-binding protein -0.78 0.31 -0.31
48 AT1G68410 Protein phosphatase 2C family protein -0.78 0.3 -0.32
49 AT2G25990 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.78 0.33 -0.32
50 AT1G45050 Ubiquitin-conjugating enzyme family protein ATUBC2-1, Arabidopsis thaliana
ubiquitin-conjugating enzyme 15		 -0.78 0.33 -0.3
51 AT1G33110 MATE efflux family protein -0.78 0.31 -0.33
52 AT3G14205 Phosphoinositide phosphatase family protein -0.77 0.31 -0.32
53 AT1G22650 Plant neutral invertase family protein alkaline/neutral invertase D 0.77 0.32 -0.32
54 AT1G23060 BEST Arabidopsis thaliana protein match is: TPX2 (targeting
protein for Xklp2) protein family (TAIR:AT1G70950.1); Has
449 Blast hits to 419 proteins in 98 species: Archae - 0;
Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158;
Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink).		 -0.77 0.34 -0.34
55 AT3G46000 actin depolymerizing factor 2 actin depolymerizing factor 2 -0.77 0.3 -0.33
56 AT5G54870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27020.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.77 0.32 -0.32
57 AT3G02070 Cysteine proteinases superfamily protein -0.77 0.32 -0.29
58 AT3G04480 endoribonucleases 0.77 0.35 -0.3
59 AT3G49490 unknown protein; Has 722 Blast hits to 186 proteins in 64
species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi -
48; Plants - 38; Viruses - 0; Other Eukaryotes - 534
(source: NCBI BLink).		 -0.77 0.33 -0.34
60 AT3G63500 Protein of unknown function (DUF1423) -0.77 0.32 -0.32
61 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 -0.77 0.32 -0.36
62 AT5G38980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 3 Blast hits to 3
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.77 0.32 -0.33
63 AT3G51420 strictosidine synthase-like 4 STRICTOSIDINE SYNTHASE-LIKE 4,
strictosidine synthase-like 4		 0.77 0.31 -0.31
64 AT3G51895 sulfate transporter 3;1 AST12, sulfate transporter 3;1 -0.77 0.3 -0.31
65 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 -0.77 0.33 -0.32
66 AT2G44570 glycosyl hydrolase 9B12 glycosyl hydrolase 9B12, glycosyl
hydrolase 9B12		 0.76 0.33 -0.32
67 AT3G53230 ATPase, AAA-type, CDC48 protein -0.76 0.34 -0.32
68 AT3G15180 ARM repeat superfamily protein -0.76 0.32 -0.32
69 AT1G71890 Major facilitator superfamily protein SUCROSE-PROTON SYMPORTER 5, SUC5 0.76 0.32 -0.32
70 AT1G55080 MED9; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G29580.1); Has 67203 Blast hits to 25757
proteins in 1293 species: Archae - 12; Bacteria - 4374;
Metazoa - 24340; Fungi - 7940; Plants - 5927; Viruses -
273; Other Eukaryotes - 24337 (source: NCBI BLink).		 MED9 -0.76 0.31 -0.32
71 AT3G62770 Transducin/WD40 repeat-like superfamily protein autophagy 18a, autophagy 18a -0.76 0.31 -0.33
72 AT5G48800 Phototropic-responsive NPH3 family protein 0.76 0.31 -0.29
73 AT1G68140 Protein of unknown function (DUF1644) -0.76 0.33 -0.31
74 AT3G25010 receptor like protein 41 receptor like protein 41, receptor
like protein 41		 -0.76 0.31 -0.32
75 AT1G16390 organic cation/carnitine transporter 3 organic cation/carnitine
transporter 3, organic
cation/carnitine transporter 3		 0.76 0.33 -0.32
76 AT1G72700 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.76 0.31 -0.32
77 AT4G11370 RING-H2 finger A1A RING-H2 finger A1A -0.76 0.29 -0.32
78 AT2G37570 HSP20-like chaperones superfamily protein sodium- and lithium-tolerant 1 -0.76 0.31 -0.31
79 AT3G05570 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39235.1); Has 73 Blast hits
to 73 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.3 -0.33
80 AT3G07560 peroxin 13 ABERRANT PEROXISOME MORPHOLOGY 2,
peroxin 13		 -0.76 0.31 -0.3
81 AT2G31260 autophagy 9 (APG9) autophagy 9, ATAPG9 -0.76 0.33 -0.32
82 AT4G11900 S-locus lectin protein kinase family protein 0.76 0.31 -0.3
83 AT5G61560 U-box domain-containing protein kinase family protein -0.76 0.33 -0.33
84 AT2G13650 golgi nucleotide sugar transporter 1 golgi nucleotide sugar transporter
1		 -0.76 0.31 -0.29
85 AT2G34630 geranyl diphosphate synthase 1 GERANYLPYROPHOSPHATE SYNTHASE,
geranyl diphosphate synthase 1		 -0.76 0.3 -0.3
86 AT1G26390 FAD-binding Berberine family protein -0.75 0.33 -0.34
87 AT2G45690 shrunken seed protein (SSE1) ARABIDOPSIS PEROXIN 16, PEROXIN
16, SSE, SHRUNKEN SEED 1		 -0.75 0.32 -0.29
88 AT3G18210 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.75 0.34 -0.28
89 AT3G47990 SUGAR-INSENSITIVE 3 SUGAR-INSENSITIVE 3 -0.75 0.32 -0.33
90 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 -0.75 0.31 -0.32
91 AT3G51660 Tautomerase/MIF superfamily protein -0.75 0.31 -0.31
92 AT2G14620 xyloglucan endotransglucosylase/hydrolase 10 xyloglucan
endotransglucosylase/hydrolase 10		 -0.75 0.32 -0.31
93 AT3G06420 Ubiquitin-like superfamily protein autophagy 8h -0.75 0.33 -0.33
94 AT3G07580 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 12 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48335.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.75 0.31 -0.33
95 AT3G13330 proteasome activating protein 200 proteasome activating protein 200 -0.75 0.31 -0.3
96 AT4G16110 response regulator 2 response regulator 2, response
regulator 2		 -0.75 0.34 -0.32
97 AT1G79210 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 -0.75 0.31 -0.32
98 AT3G14690 cytochrome P450, family 72, subfamily A, polypeptide 15 cytochrome P450, family 72,
subfamily A, polypeptide 15		 -0.75 0.33 -0.3
99 AT3G22290 Endoplasmic reticulum vesicle transporter protein -0.75 0.33 -0.3
100 AT5G20910 RING/U-box superfamily protein ABI3-interacting protein 2 -0.75 0.33 -0.3
101 AT5G43430 electron transfer flavoprotein beta electron transfer flavoprotein
beta		 -0.75 0.33 -0.33
102 AT3G15580 Ubiquitin-like superfamily protein AUTOPHAGY 8H, AUTOPHAGY 8I -0.75 0.28 -0.32
103 AT1G29850 double-stranded DNA-binding family protein -0.74 0.3 -0.32
104 AT2G41040 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.74 0.3 -0.32
105 AT3G55910 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.74 0.32 -0.31
106 AT1G01260 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.74 0.31 -0.33
107 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 -0.74 0.32 -0.32
108 AT4G18050 P-glycoprotein 9 ATP-binding cassette B9,
P-glycoprotein 9		 -0.74 0.32 -0.32
109 AT5G59580 UDP-glucosyl transferase 76E1 UDP-glucosyl transferase 76E1 -0.74 0.33 -0.32
110 AT3G19970 alpha/beta-Hydrolases superfamily protein -0.74 0.32 -0.31
111 AT3G63050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G48075.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.74 0.32 -0.32
112 AT5G47050 SBP (S-ribonuclease binding protein) family protein -0.74 0.31 -0.3
113 AT2G17760 Eukaryotic aspartyl protease family protein -0.74 0.31 -0.32