AT1G18900 : -
Query Information
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AGICode AT1G18900
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G18900 Pentatricopeptide repeat (PPR) superfamily protein 1 0.33 -0.32
2 AT3G06410 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.77 0.31 -0.31
3 AT3G09540 Pectin lyase-like superfamily protein 0.75 0.3 -0.33
4 AT1G10090 Early-responsive to dehydration stress protein (ERD4) 0.75 0.35 -0.32
5 AT1G75370 Sec14p-like phosphatidylinositol transfer family protein 0.74 0.3 -0.32
6 AT2G21320 B-box zinc finger family protein 0.73 0.31 -0.31
7 AT1G59580 mitogen-activated protein kinase homolog 2 mitogen-activated protein kinase
homolog 2, mitogen-activated
protein kinase homolog 2		 -0.73 0.31 -0.32
8 AT4G02880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03290.2); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.72 0.3 -0.33
9 AT2G28550 related to AP2.7 related to AP2.7, TARGET OF EARLY
ACTIVATION TAGGED (EAT) 1		 0.71 0.33 -0.31
10 AT4G15420 Ubiquitin fusion degradation UFD1 family protein 0.71 0.32 -0.3
11 AT4G12000 SNARE associated Golgi protein family 0.71 0.32 -0.32
12 AT1G55690 Sec14p-like phosphatidylinositol transfer family protein 0.71 0.31 -0.31
13 AT1G06000 UDP-Glycosyltransferase superfamily protein 0.71 0.31 -0.31
14 AT2G42530 cold regulated 15b cold regulated 15b 0.7 0.33 -0.31
15 AT3G62930 Thioredoxin superfamily protein -0.7 0.32 -0.32
16 AT5G18550 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.7 0.31 -0.29
17 AT3G17130 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.69 0.32 -0.3
18 AT4G22270 Protein of unknown function (DUF3537) ARABIDOPSIS MEMBRANE RELATED
BIGGER1, MEMBRANE RELATED BIGGER1		 0.69 0.31 -0.32
19 AT1G14580 C2H2-like zinc finger protein 0.69 0.31 -0.31
20 AT1G78070 Transducin/WD40 repeat-like superfamily protein 0.69 0.3 -0.32
21 AT1G16570 UDP-Glycosyltransferase superfamily protein -0.68 0.3 -0.33
22 AT2G16070 plastid division2 PLASTID DIVISION2 0.68 0.31 -0.3
23 AT5G61810 Mitochondrial substrate carrier family protein ATP/phosphate carrier 1 0.68 0.33 -0.31
24 AT1G64890 Major facilitator superfamily protein 0.68 0.32 -0.3
25 AT4G24060 Dof-type zinc finger DNA-binding family protein -0.68 0.33 -0.32
26 AT4G39800 myo-inositol-1-phosphate synthase 1 INOSITOL 3-PHOSPHATE SYNTHASE 1,
MYO-INOSITOL-1-PHOSPHATE SYNTHASE
1, MI-1-P SYNTHASE, D-myo-Inositol
3-Phosphate Synthase 1,
myo-inositol-1-phosphate synthase
1		 0.68 0.32 -0.33
27 AT4G27940 manganese tracking factor for mitochondrial SOD2 ARABIDOPSIS MANGANESE TRACKING
FACTOR FOR MITOCHONDRIAL SOD2,
manganese tracking factor for
mitochondrial SOD2		 0.68 0.32 -0.34
28 AT1G23860 RS-containing zinc finger protein 21 RS-containing zinc finger protein
21, RS-containing zinc finger
protein 21, RS-containing zinc
finger protein 21, SRZ-21, SRZ21		 -0.67 0.32 -0.3
29 AT2G46830 circadian clock associated 1 AtCCA1, circadian clock associated
1		 0.67 0.31 -0.31
30 AT3G06850 2-oxoacid dehydrogenases acyltransferase family protein BCE2, DARK INDUCIBLE 3, LTA1 -0.67 0.32 -0.32
31 AT4G32690 hemoglobin 3 ARABIDOPSIS HEMOGLOBIN 3,
hemoglobin 3		 -0.67 0.33 -0.29
32 AT2G01330 nucleotide binding 0.67 0.32 -0.31
33 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.3 -0.33
34 AT3G24190 Protein kinase superfamily protein 0.66 0.33 -0.31
35 AT2G22190 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
E		 0.66 0.3 -0.32
36 AT1G76580 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.66 0.3 -0.3
37 AT2G37040 PHE ammonia lyase 1 ATPAL1, PHE ammonia lyase 1 0.65 0.31 -0.32
38 AT5G10630 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.65 0.34 -0.35
39 AT5G22920 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.65 0.3 -0.31
40 AT4G15130 phosphorylcholine cytidylyltransferase2 ATCCT2, phosphorylcholine
cytidylyltransferase2		 0.65 0.31 -0.32
41 AT5G48880 peroxisomal 3-keto-acyl-CoA thiolase 2 3-KETO-ACYL-COENZYME A THIOLASE 5,
PEROXISOMAL-3-KETO-ACYL-COA
THIOLASE 1, peroxisomal
3-keto-acyl-CoA thiolase 2		 0.65 0.31 -0.35
42 AT3G25855 Copper transport protein family 0.65 0.32 -0.32
43 AT1G63260 tetraspanin10 tetraspanin10 -0.65 0.32 -0.32
44 AT1G08350 Endomembrane protein 70 protein family -0.64 0.31 -0.32
45 AT4G31140 O-Glycosyl hydrolases family 17 protein 0.64 0.33 -0.29
46 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 0.64 0.32 -0.31
47 AT3G27580 Protein kinase superfamily protein ATPK7, D6 PROTEIN KINASE LIKE 3 -0.64 0.31 -0.3
48 AT3G50880 DNA glycosylase superfamily protein -0.64 0.32 -0.31
49 AT4G32190 Myosin heavy chain-related protein 0.64 0.31 -0.33
50 AT2G23290 myb domain protein 70 myb domain protein 70, myb domain
protein 70		 -0.64 0.34 -0.33
51 AT3G66658 aldehyde dehydrogenase 22A1 aldehyde dehydrogenase 22A1 -0.64 0.33 -0.32
52 AT2G17840 Senescence/dehydration-associated protein-related EARLY-RESPONSIVE TO DEHYDRATION 7 0.64 0.32 -0.31
53 AT4G28610 phosphate starvation response 1 AtPHR1, phosphate starvation
response 1		 0.63 0.29 -0.3
54 AT1G73650 Protein of unknown function (DUF1295) 0.63 0.31 -0.33
55 AT1G54850 HSP20-like chaperones superfamily protein -0.63 0.32 -0.32
56 AT3G09650 Tetratricopeptide repeat (TPR)-like superfamily protein CRM3, HIGH CHLOROPHYLL
FLUORESCENCE 152		 0.63 0.29 -0.3
57 AT5G64170 dentin sialophosphoprotein-related 0.63 0.32 -0.31
58 AT1G78570 rhamnose biosynthesis 1 ARABIDOPSIS THALIANA RHAMNOSE
BIOSYNTHESIS 1, rhamnose
biosynthesis 1, REPRESSOR OF LRX1
1		 0.63 0.33 -0.29
59 AT1G67850 Protein of unknown function (DUF707) 0.62 0.34 -0.32
60 AT5G13950 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits
to 145 proteins in 44 species: Archae - 0; Bacteria - 2;
Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.62 0.33 -0.31
61 AT1G14040 EXS (ERD1/XPR1/SYG1) family protein -0.62 0.33 -0.31
62 AT4G34340 TBP-associated factor 8 TBP-associated factor 8 0.62 0.34 -0.31
63 AT2G31380 salt tolerance homologue salt tolerance homologue 0.61 0.33 -0.34
64 AT2G39940 RNI-like superfamily protein CORONATINE INSENSITIVE 1 0.61 0.31 -0.3
65 AT3G14720 MAP kinase 19 ARABIDOPSIS THALIANA MAP KINASE
19, MAP kinase 19		 0.61 0.31 -0.32
66 AT1G17110 ubiquitin-specific protease 15 ubiquitin-specific protease 15 0.61 0.31 -0.31
67 AT3G02990 heat shock transcription factor A1E heat shock transcription factor
A1E, heat shock transcription
factor A1E		 0.61 0.3 -0.31
68 AT1G30130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1365
(InterPro:IPR010775); Has 1789 Blast hits to 1789 proteins
in 449 species: Archae - 0; Bacteria - 824; Metazoa - 0;
Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 920
(source: NCBI BLink).		 -0.6 0.34 -0.35
69 AT5G07180 ERECTA-like 2 ERECTA-like 2 0.6 0.34 -0.3
70 AT5G57655 xylose isomerase family protein -0.6 0.31 -0.34
71 AT1G53710 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.6 0.33 -0.31
72 AT1G55310 SC35-like splicing factor 33 SC35-LIKE SPLICING FACTOR 33,
SC35-like splicing factor 33,
SC35-LIKE SPLICING FACTOR 33,
SC35-like splicing factor 33		 -0.59 0.34 -0.3
73 AT3G62860 alpha/beta-Hydrolases superfamily protein -0.59 0.3 -0.34
74 AT1G20670 DNA-binding bromodomain-containing protein 0.59 0.32 -0.32
75 AT1G14900 high mobility group A high mobility group A -0.59 0.31 -0.32
76 AT4G38960 B-box type zinc finger family protein 0.59 0.31 -0.32
77 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 -0.59 0.34 -0.3
78 AT5G06180 Protein of unknown function (DUF1022) -0.58 0.35 -0.33
79 AT1G07180 alternative NAD(P)H dehydrogenase 1 ARABIDOPSIS THALIANA INTERNAL
NON-PHOSPHORYLATING NAD ( P ) H
DEHYDROGENASE, alternative
NAD(P)H dehydrogenase 1		 0.58 0.31 -0.31
80 AT3G11590 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins
in 1213 species: Archae - 372; Bacteria - 2307; Metazoa -
10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other
Eukaryotes - 5824 (source: NCBI BLink).		 0.58 0.29 -0.3
81 AT5G64570 beta-D-xylosidase 4 ARABIDOPSIS THALIANA
BETA-D-XYLOSIDASE 4,
beta-D-xylosidase 4		 -0.58 0.33 -0.32
82 AT2G48100 Exonuclease family protein -0.58 0.3 -0.31
83 AT5G17010 Major facilitator superfamily protein 0.58 0.34 -0.31
84 AT3G13450 Transketolase family protein DARK INDUCIBLE 4 -0.56 0.31 -0.3
85 AT1G27620 HXXXD-type acyl-transferase family protein -0.56 0.33 -0.31
86 AT2G26980 CBL-interacting protein kinase 3 CBL-interacting protein kinase 3,
SNF1-RELATED PROTEIN KINASE 3.17		 -0.56 0.31 -0.3
87 AT4G39240 Galactose oxidase/kelch repeat superfamily protein -0.55 0.32 -0.33
88 AT3G09470 Major facilitator superfamily protein -0.54 0.31 -0.31
89 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 -0.54 0.31 -0.32
90 AT4G26220 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.53 0.31 -0.33
91 AT1G48160 signal recognition particle 19 kDa protein, putative /
SRP19, putative		 -0.52 0.31 -0.31
92 AT3G04660 F-box and associated interaction domains-containing protein -0.52 0.34 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		-0.74 0.45 -0.47 C0227