AT1G12550 : hydroxypyruvate reductase 3
Query Information
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AGICode AT1G12550
Description D-isomer specific 2-hydroxyacid dehydrogenase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G12550 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 hydroxypyruvate reductase 3 1 0.32 -0.3
2 AT1G68260 Thioesterase superfamily protein 0.83 0.32 -0.31
3 AT1G55500 evolutionarily conserved C-terminal region 4 evolutionarily conserved
C-terminal region 4		 -0.81 0.32 -0.32
4 AT1G19000 Homeodomain-like superfamily protein 0.78 0.32 -0.31
5 AT4G13950 ralf-like 31 ralf-like 31 0.77 0.3 -0.32
6 AT3G09250 Nuclear transport factor 2 (NTF2) family protein 0.76 0.32 -0.32
7 AT3G19000 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.74 0.31 -0.32
8 AT2G20930 SNARE-like superfamily protein 0.74 0.32 -0.3
9 AT1G79870 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 0.73 0.33 -0.3
10 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 -0.73 0.31 -0.32
11 AT5G54540 Uncharacterised conserved protein (UCP012943) 0.72 0.3 -0.32
12 AT3G44550 fatty acid reductase 5 fatty acid reductase 5 -0.72 0.29 -0.31
13 AT5G16750 Transducin family protein / WD-40 repeat family protein TORMOZEMBRYO DEFECTIVE -0.72 0.32 -0.3
14 AT1G33780 Protein of unknown function (DUF179) 0.72 0.3 -0.34
15 AT2G44060 Late embryogenesis abundant protein, group 2 0.71 0.32 -0.32
16 AT4G27710 cytochrome P450, family 709, subfamily B, polypeptide 3 cytochrome P450, family 709,
subfamily B, polypeptide 3		 0.71 0.31 -0.31
17 AT2G33735 Chaperone DnaJ-domain superfamily protein 0.71 0.31 -0.35
18 AT5G07580 Integrase-type DNA-binding superfamily protein 0.7 0.33 -0.33
19 AT5G15700 DNA/RNA polymerases superfamily protein -0.69 0.31 -0.32
20 AT4G04860 DERLIN-2.2 DERLIN-2.2 -0.69 0.33 -0.3
21 AT2G21970 stress enhanced protein 2 stress enhanced protein 2 0.69 0.3 -0.32
22 AT1G77990 STAS domain / Sulfate transporter family AST56, SULPHATE TRANSPORTER 2;2 0.69 0.32 -0.33
23 AT5G35910 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 -0.69 0.31 -0.33
24 AT5G42940 RING/U-box superfamily protein -0.69 0.32 -0.31
25 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 -0.68 0.31 -0.3
26 AT1G16590 DNA-binding HORMA family protein ATREV7, REV7 0.67 0.33 -0.32
27 AT1G60870 maternal effect embryo arrest 9 maternal effect embryo arrest 9 0.67 0.27 -0.34
28 AT3G47490 HNH endonuclease 0.67 0.33 -0.33
29 AT5G03430 phosphoadenosine phosphosulfate (PAPS) reductase family
protein		 0.67 0.31 -0.31
30 AT1G26560 beta glucosidase 40 beta glucosidase 40 0.67 0.31 -0.29
31 AT3G25655 inflorescence deficient in abscission (IDA)-like 1 inflorescence deficient in
abscission (IDA)-like 1		 -0.66 0.31 -0.33
32 AT5G67290 FAD-dependent oxidoreductase family protein 0.66 0.31 -0.32
33 AT1G32260 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G35480.1); Has 48 Blast
hits to 48 proteins in 14 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.33 -0.33
34 AT3G11910 ubiquitin-specific protease 13 AtUBP13, ubiquitin-specific
protease 13		 -0.66 0.34 -0.3
35 AT1G15440 periodic tryptophan protein 2 (PERIODIC TRYPTOPHAN PROTEIN 2,
periodic tryptophan protein 2		 -0.66 0.33 -0.33
36 AT2G22090 RNA-binding (RRM/RBD/RNP motifs) family protein UBA1A 0.66 0.3 -0.31
37 AT5G27540 MIRO-related GTP-ase 1 embryo defective 2473,
MIRO-related GTP-ase 1		 -0.65 0.3 -0.3
38 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.65 0.31 -0.33
39 AT3G57660 nuclear RNA polymerase A1 nuclear RNA polymerase A1 -0.65 0.32 -0.33
40 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 -0.65 0.31 -0.31
41 AT2G41500 WD-40 repeat family protein / small nuclear
ribonucleoprotein Prp4p-related		 EMB2776, LACHESIS -0.65 0.29 -0.3
42 AT5G48120 ARM repeat superfamily protein -0.65 0.34 -0.31
43 AT1G06760 winged-helix DNA-binding transcription factor family
protein		 0.65 0.3 -0.32
44 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 0.65 0.33 -0.33
45 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.33 -0.33
46 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO -0.64 0.32 -0.31
47 AT1G63780 Ribosomal RNA processing Brix domain protein IMP4 -0.64 0.33 -0.29
48 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 -0.64 0.29 -0.32
49 AT5G17270 Protein prenylyltransferase superfamily protein -0.64 0.32 -0.3
50 AT2G23380 SET domain-containing protein CURLY LEAF, INCURVATA 1, SETDOMAIN
GROUP 1, SETDOMAIN 1		 -0.64 0.3 -0.33
51 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 -0.64 0.31 -0.32
52 AT4G02710 Kinase interacting (KIP1-like) family protein -0.64 0.3 -0.33
53 AT1G23020 ferric reduction oxidase 3 FERRIC REDUCTION OXIDASE 3, ferric
reduction oxidase 3		 0.64 0.29 -0.32
54 AT3G48860 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins
in 897 species: Archae - 180; Bacteria - 1190; Metazoa -
6552; Fungi - 1361; Plants - 886; Viruses - 50; Other
Eukaryotes - 2210 (source: NCBI BLink).		 -0.64 0.33 -0.31
55 AT3G62240 RING/U-box superfamily protein -0.64 0.31 -0.32
56 AT5G42540 exoribonuclease 2 EXORIBONUCLEASE 2, exoribonuclease
2		 -0.64 0.29 -0.32
57 AT2G02160 CCCH-type zinc finger family protein -0.64 0.37 -0.3
58 AT4G21480 sugar transporter protein 12 sugar transporter protein 12 0.64 0.33 -0.3
59 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 -0.64 0.31 -0.33
60 AT3G20960 cytochrome P450, family 705, subfamily A, polypeptide 33 cytochrome P450, family 705,
subfamily A, polypeptide 33		 -0.64 0.33 -0.33
61 AT3G49890 unknown protein; Has 27 Blast hits to 27 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.63 0.33 -0.31
62 AT1G49480 related to vernalization1 1 related to vernalization1 1 0.63 0.34 -0.31
63 AT2G24500 Zinc finger protein 622 FZF -0.63 0.32 -0.31
64 AT5G41040 HXXXD-type acyl-transferase family protein -0.63 0.32 -0.32
65 AT1G48970 NagB/RpiA/CoA transferase-like superfamily protein -0.63 0.3 -0.3
66 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.33 -0.32
67 AT3G24080 KRR1 family protein -0.63 0.31 -0.34
68 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 -0.62 0.32 -0.32
69 AT1G77180 chromatin protein family SKIP -0.62 0.32 -0.32
70 AT2G40600 appr-1-p processing enzyme family protein 0.62 0.31 -0.31
71 AT1G48420 D-cysteine desulfhydrase 1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, A. THALIANA
1-AMINOCYCLOPROPANE-1-CARBOXYLIC
ACID DEAMINASE 1, D-cysteine
desulfhydrase, D-cysteine
desulfhydrase		 0.62 0.33 -0.32
72 AT1G51830 Leucine-rich repeat protein kinase family protein -0.62 0.32 -0.28
73 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 -0.62 0.32 -0.34
74 AT1G09770 cell division cycle 5 ARABIDOPSIS THALIANA CELL DIVISION
CYCLE 5, ARABIDOPSIS THALIANA MYB
DOMAIN CELL DIVISION CYCLE 5, cell
division cycle 5		 -0.62 0.31 -0.32
75 AT4G28270 RING membrane-anchor 2 ATRMA2, RING membrane-anchor 2 0.62 0.31 -0.28
76 AT3G03980 NAD(P)-binding Rossmann-fold superfamily protein 0.62 0.31 -0.3
77 AT4G18975 Pentatricopeptide repeat (PPR) superfamily protein 0.62 0.32 -0.31
78 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.62 0.31 -0.32
79 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 -0.62 0.3 -0.29
80 AT5G45140 nuclear RNA polymerase C2 nuclear RNA polymerase C2 -0.62 0.31 -0.32
81 AT3G12670 CTP synthase family protein embryo defective 2742 -0.62 0.3 -0.33
82 AT2G35820 ureidoglycolate hydrolases 0.62 0.31 -0.31
83 AT2G06040 CONTAINS InterPro DOMAIN/s: Leucine-rich repeat,
cysteine-containing subtype (InterPro:IPR006553); BEST
Arabidopsis thaliana protein match is: RNI-like superfamily
protein (TAIR:AT5G21900.1); Has 5028 Blast hits to 2547
proteins in 240 species: Archae - 0; Bacteria - 125;
Metazoa - 2326; Fungi - 765; Plants - 1373; Viruses - 0;
Other Eukaryotes - 439 (source: NCBI BLink).		 -0.62 0.35 -0.31
84 AT1G67950 RNA-binding (RRM/RBD/RNP motifs) family protein 0.62 0.34 -0.3
85 AT4G12750 Homeodomain-like transcriptional regulator -0.61 0.32 -0.31
86 AT1G48360 zinc ion binding;nucleic acid binding;hydrolases, acting on
acid anhydrides, in phosphorus-containing anhydrides		 -0.61 0.31 -0.3
87 AT5G01350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.61 0.3 -0.34
88 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain -0.61 0.32 -0.29
89 AT1G04945 HIT-type Zinc finger family protein -0.61 0.33 -0.28
90 AT3G02990 heat shock transcription factor A1E heat shock transcription factor
A1E, heat shock transcription
factor A1E		 -0.61 0.33 -0.33
91 AT3G13020 hAT transposon superfamily protein -0.61 0.31 -0.31
92 AT5G06839 bZIP transcription factor family protein bZIP65, TGACG (TGA) motif-binding
protein 10		 -0.61 0.32 -0.33
93 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 -0.6 0.3 -0.3
94 AT1G26660 Prefoldin chaperone subunit family protein -0.6 0.31 -0.32
95 AT2G32250 FAR1-related sequence 2 FAR1-related sequence 2 -0.6 0.31 -0.29
96 AT3G06480 DEAD box RNA helicase family protein -0.6 0.31 -0.31
97 AT1G53590 Calcium-dependent lipid-binding (CaLB domain) family
protein		 NTMC2T6.1, NTMC2TYPE6.1 -0.59 0.31 -0.32
98 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.32 -0.31
99 AT5G43930 Transducin family protein / WD-40 repeat family protein -0.59 0.31 -0.31
100 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 -0.59 0.31 -0.32
101 AT4G17410 DWNN domain, a CCHC-type zinc finger -0.59 0.28 -0.33
102 AT4G17140 pleckstrin homology (PH) domain-containing protein -0.59 0.31 -0.32
103 AT3G20720 unknown protein; Has 184 Blast hits to 181 proteins in 66
species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi -
0; Plants - 40; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 -0.59 0.3 -0.32
104 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 -0.59 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
105 C0008 γ-Aminobutyric acid - 4-Aminobutyrate glutamate degradation IV,
4-aminobutyrate degradation IV,
putrescine degradation IV 		-0.63 0.32 -0.31 C0008