AT1G28080 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G28080
Description RING finger protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G28080 RING finger protein 1 0.31 -0.3
2 AT4G28130 diacylglycerol kinase 6 ATDGK6, diacylglycerol kinase 6 0.61 0.31 -0.31
3 AT5G63520 CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like
(InterPro:IPR022364), FIST C domain (InterPro:IPR019494),
FIST domain, N-terminal (InterPro:IPR013702); Has 137 Blast
hits to 137 proteins in 56 species: Archae - 0; Bacteria -
88; Metazoa - 6; Fungi - 0; Plants - 32; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.57 0.32 -0.31
4 AT1G49000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G18560.1); Has
105 Blast hits to 105 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.33 -0.31
5 AT5G35800 transposable element gene 0.56 0.3 -0.31
6 AT4G18425 Protein of unknown function (DUF679) 0.56 0.31 -0.32
7 AT4G28590 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10
growth stages; BEST Arabidopsis thaliana protein match is:
Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114
Blast hits to 112 proteins in 39 species: Archae - 2;
Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses
- 0; Other Eukaryotes - 22 (source: NCBI BLink).		 Mesophyll-cell RNAi Library line 7 -0.55 0.33 -0.33
8 AT3G25630 transposable element gene 0.55 0.32 -0.3
9 AT1G80860 phospholipid N-methyltransferase ARABIDOPSIS PHOSPHOLIPID
N-METHYLTRANSFERASE, phospholipid
N-methyltransferase		 -0.54 0.31 -0.32
10 AT1G22210 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
C		 0.54 0.31 -0.32
11 AT1G61350 ARM repeat superfamily protein -0.54 0.33 -0.34
12 AT5G47435 formyltetrahydrofolate deformylase, putative -0.54 0.31 -0.3
13 AT5G28300 Duplicated homeodomain-like superfamily protein -0.54 0.33 -0.36
14 AT3G11370 Cysteine/Histidine-rich C1 domain family protein 0.53 0.31 -0.31
15 AT3G29750 Eukaryotic aspartyl protease family protein -0.53 0.31 -0.31
16 AT1G21050 Protein of unknown function, DUF617 -0.53 0.33 -0.3
17 AT5G41720 BEST Arabidopsis thaliana protein match is: F-box
protein-related (TAIR:AT1G64290.1); Has 70 Blast hits to 70
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.52 0.31 -0.31
18 AT5G37840 BEST Arabidopsis thaliana protein match is: plastid
movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.52 0.31 -0.31
19 AT1G33265 Transmembrane proteins 14C -0.52 0.32 -0.31
20 AT1G75190 unknown protein; Has 7306 Blast hits to 3858 proteins in
279 species: Archae - 15; Bacteria - 134; Metazoa - 3314;
Fungi - 546; Plants - 228; Viruses - 207; Other Eukaryotes
- 2862 (source: NCBI BLink).		 -0.52 0.3 -0.31
21 AT2G14590 transposable element gene -0.51 0.32 -0.32
22 AT3G56750 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41150.2); Has 128 Blast hits
to 128 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.5 0.31 -0.32
23 AT5G55980 serine-rich protein-related 0.5 0.33 -0.32
24 AT1G30455 transcription regulators;translation initiation
factors;zinc ion binding;transcription activators		 0.5 0.32 -0.33
25 AT5G26970 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.5 0.33 -0.3
26 AT1G77780 Glycosyl hydrolase superfamily protein -0.49 0.31 -0.32
27 AT1G71930 vascular related NAC-domain protein 7 Arabidopsis NAC domain containing
protein 30, vascular related
NAC-domain protein 7		 0.49 0.31 -0.32
28 AT3G46150 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.49 0.32 -0.34
29 AT5G63290 Radical SAM superfamily protein -0.49 0.3 -0.32
30 AT1G08135 cation/H+ exchanger 6B ATCHX6B, cation/H+ exchanger 6B 0.48 0.32 -0.29
31 AT1G41770 transposable element gene 0.48 0.29 -0.34
32 AT2G41260 glycine-rich protein / late embryogenesis abundant protein
(M17)		 ATM17, M17 0.48 0.32 -0.3
33 AT4G04660 pseudogene, hypothetical protein, similar to zinc finger
protein (Arabidopsis thaliana) GI:976277		 -0.48 0.3 -0.3
34 AT1G16770 unknown protein; Has 109 Blast hits to 109 proteins in 52
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.47 0.32 -0.31
35 AT4G11470 cysteine-rich RLK (RECEPTOR-like protein kinase) 31 cysteine-rich RLK (RECEPTOR-like
protein kinase) 31		 0.47 0.33 -0.3
36 AT1G26780 myb domain protein 117 myb domain protein 117, LATERAL
ORGAN FUSION 1, myb domain protein
117		 0.47 0.32 -0.29
37 AT5G27800 Class II aminoacyl-tRNA and biotin synthetases superfamily
protein		 0.46 0.31 -0.31
38 AT3G14480 glycine/proline-rich protein -0.46 0.32 -0.3
39 AT3G21620 ERD (early-responsive to dehydration stress) family protein 0.46 0.34 -0.31
40 AT2G32310 CCT motif family protein -0.46 0.31 -0.31
41 AT4G12360 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.46 0.29 -0.34
42 AT5G05050 Cysteine proteinases superfamily protein -0.46 0.32 -0.31
43 AT2G07290 unknown protein; Has 8 Blast hits to 8 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.45 0.31 -0.31
44 AT3G04910 with no lysine (K) kinase 1 ATWNK1, with no lysine (K) kinase
1, ZIK4		 -0.45 0.32 -0.32
45 AT5G10660 calmodulin-binding protein-related 0.45 0.32 -0.33
46 AT2G04770 transposable element gene -0.44 0.34 -0.32
47 AT4G18770 myb domain protein 98 myb domain protein 98, myb domain
protein 98		 0.44 0.33 -0.3
48 AT2G05660 transposable element gene 0.44 0.29 -0.33
49 AT5G39880 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G28750.1); Has 25 Blast hits to 25 proteins in 3
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.44 0.3 -0.3
50 AT5G17680 disease resistance protein (TIR-NBS-LRR class), putative 0.42 0.33 -0.33
51 AT1G53020 UBC26 (UBIQUITIN-CONJUGATING ENZYME 26); ubiquitin-protein
ligase		 HO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 3, ubiquitin-conjugating
enzyme 26		 0.4 0.32 -0.33