AT1G28135 : -
Query Information
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AGICode AT1G28135
Description unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G28135 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 7 Blast hits to 7 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 1 0.29 -0.29
2 AT4G29580 Cytidine/deoxycytidylate deaminase family protein 0.78 0.31 -0.31
3 AT4G33450 myb domain protein 69 MYB DOMAIN PROTEIN 69, myb domain
protein 69		 0.77 0.31 -0.31
4 AT4G30590 early nodulin-like protein 12 AtENODL12, early nodulin-like
protein 12		 0.76 0.33 -0.32
5 AT4G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10870.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.76 0.29 -0.33
6 AT5G57320 villin, putative villin 5 0.76 0.31 -0.31
7 AT5G17690 like heterochromatin protein (LHP1) AtLHP1, LIKE HETEROCHROMATIN
PROTEIN 1, TERMINAL FLOWER 2		 0.75 0.32 -0.32
8 AT2G31100 alpha/beta-Hydrolases superfamily protein 0.74 0.32 -0.32
9 AT5G10120 Ethylene insensitive 3 family protein 0.74 0.31 -0.31
10 AT1G35380 transposable element gene -0.73 0.3 -0.32
11 AT4G29285 low-molecular-weight cysteine-rich 24 low-molecular-weight cysteine-rich
24		 0.73 0.31 -0.3
12 AT1G22290 14-3-3 family protein 0.73 0.32 -0.31
13 AT2G45200 golgi snare 12 ATGOS12, golgi snare 12 -0.73 0.3 -0.32
14 AT4G25350 EXS (ERD1/XPR1/SYG1) family protein SHORT HYPOCOTYL UNDER BLUE1 0.73 0.31 -0.34
15 AT5G12450 FBD-like domain family protein 0.72 0.31 -0.33
16 AT3G03230 alpha/beta-Hydrolases superfamily protein 0.72 0.31 -0.32
17 AT2G35460 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.72 0.32 -0.31
18 AT4G24650 isopentenyltransferase 4 ARABIDOPSIS THALIANA
ISOPENTENYLTRANSFERASE 4,
isopentenyltransferase 4		 0.72 0.3 -0.31
19 AT2G02660 F-box associated ubiquitination effector family protein -0.72 0.32 -0.32
20 AT3G49162 pseudogene of glycoside hydrolase family 28 protein -0.72 0.3 -0.3
21 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.71 0.33 -0.32
22 AT5G37620 Cysteine/Histidine-rich C1 domain family protein 0.71 0.33 -0.3
23 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED 0.71 0.31 -0.32
24 AT4G15730 CW-type Zinc Finger 0.71 0.32 -0.33
25 AT1G68090 annexin 5 annexin 5, ANNEXIN ARABIDOPSIS
THALIANA 5		 0.71 0.32 -0.3
26 AT5G40280 Prenyltransferase family protein ARABIDOPSIS THALIANA FARNESYL
TRANSFERASE BETA SUBUNIT, ENHANCED
RESPONSE TO ABA 1, WIGGUM		 -0.7 0.31 -0.29
27 AT5G45080 phloem protein 2-A6 phloem protein 2-A6, phloem
protein 2-A6		 0.7 0.32 -0.32
28 AT3G55160 unknown protein; EXPRESSED IN: 11 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2428, death-receptor-like
(InterPro:IPR019442); Has 357 Blast hits to 330 proteins in
163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi
- 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45
(source: NCBI BLink).		 0.7 0.3 -0.31
29 AT2G36550 CONTAINS InterPro DOMAIN/s: NLI interacting factor
(InterPro:IPR004274); BEST Arabidopsis thaliana protein
match is: Haloacid dehalogenase-like hydrolase (HAD)
superfamily protein (TAIR:AT2G36540.1); Has 91 Blast hits
to 91 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 2; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.7 0.32 -0.32
30 AT1G26530 PIN domain-like family protein -0.7 0.3 -0.32
31 AT5G11290 Plant protein of unknown function (DUF247) 0.7 0.32 -0.3
32 AT3G01380 transferases;sulfuric ester
hydrolases;catalytics;transferases		 0.7 0.31 -0.31
33 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.7 0.33 -0.32
34 AT3G43630 Vacuolar iron transporter (VIT) family protein 0.7 0.33 -0.33
35 AT3G48900 single-stranded DNA endonuclease family protein 0.69 0.32 -0.29
36 AT3G52310 ABC-2 type transporter family protein ATP-binding cassette G27 0.69 0.31 -0.3
37 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 0.69 0.32 -0.31
38 AT5G54950 Aconitase family protein 0.69 0.32 -0.32
39 AT1G58300 heme oxygenase 4 heme oxygenase 4 0.69 0.32 -0.29
40 AT1G68240 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.69 0.31 -0.3
41 AT2G36670 Eukaryotic aspartyl protease family protein 0.69 0.32 -0.3
42 AT4G05280 transposable element gene 0.68 0.33 -0.31
43 AT5G49260 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.68 0.33 -0.33
44 AT1G35970 transposable element gene 0.67 0.31 -0.32
45 AT3G21100 RNA-binding (RRM/RBD/RNP motifs) family protein 0.67 0.31 -0.31
46 AT1G70920 homeobox-leucine zipper protein 18 homeobox-leucine zipper protein
18, homeobox-leucine zipper
protein 18		 -0.67 0.29 -0.32
47 AT3G60760 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.67 0.33 -0.3
48 AT3G29430 Terpenoid synthases superfamily protein -0.67 0.3 -0.33
49 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED -0.67 0.32 -0.32
50 AT5G27170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; Has 1807 Blast hits to 1807 proteins in 277
species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi -
347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.67 0.29 -0.3
51 AT3G43120 SAUR-like auxin-responsive protein family 0.67 0.3 -0.32
52 AT1G35995 transposable element gene -0.66 0.33 -0.33
53 AT4G11590 F-box associated ubiquitination effector family protein 0.66 0.31 -0.31
54 AT3G25260 Major facilitator superfamily protein 0.66 0.34 -0.31
55 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 -0.66 0.3 -0.33
56 AT1G62940 acyl-CoA synthetase 5 acyl-CoA synthetase 5 0.66 0.33 -0.32
57 AT3G42070 transposable element gene 0.66 0.33 -0.32
58 AT1G14940 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.66 0.29 -0.33
59 AT2G07560 H(+)-ATPase 6 H(+)-ATPase 6, H(+)-ATPase 6 -0.66 0.29 -0.3
60 AT4G10820 F-box family protein 0.66 0.31 -0.32
61 AT1G54720 early-responsive to dehydration protein-related / ERD
protein-related		 0.66 0.33 -0.33
62 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 -0.66 0.29 -0.33
63 AT3G42860 zinc knuckle (CCHC-type) family protein -0.66 0.31 -0.3
64 AT2G29780 Galactose oxidase/kelch repeat superfamily protein 0.66 0.33 -0.31
65 AT5G24320 Transducin/WD40 repeat-like superfamily protein 0.66 0.33 -0.32
66 AT3G17290 transposable element gene 0.65 0.3 -0.33
67 AT2G44900 ARABIDILLO-1 ARABIDILLO-1, F-box Armadillo
protein 1		 0.65 0.3 -0.33
68 AT1G55200 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.65 0.3 -0.33
69 AT1G05400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G06810.1); Has 31 Blast hits
to 31 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.32 -0.32
70 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.65 0.3 -0.32
71 AT5G18910 Protein kinase superfamily protein 0.65 0.3 -0.32
72 AT3G49830 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.65 0.3 -0.29
73 AT1G02540 unknown protein; Has 3327 Blast hits to 2216 proteins in
265 species: Archae - 18; Bacteria - 202; Metazoa - 802;
Fungi - 283; Plants - 84; Viruses - 187; Other Eukaryotes -
1751 (source: NCBI BLink).		 0.65 0.3 -0.36
74 AT1G20135 GDSL-like Lipase/Acylhydrolase family protein 0.65 0.3 -0.3
75 AT5G09780 Transcriptional factor B3 family protein 0.65 0.33 -0.34
76 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.65 0.32 -0.3
77 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein 0.65 0.32 -0.31
78 AT1G35570 transposable element gene 0.65 0.32 -0.31
79 AT5G01440 BEST Arabidopsis thaliana protein match is: Insulinase
(Peptidase family M16) family protein (TAIR:AT1G06900.1);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.65 0.3 -0.31
80 AT1G15590 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT1G80400.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.64 0.31 -0.34
81 AT5G52690 Copper transport protein family -0.64 0.32 -0.31
82 AT1G48910 Flavin-containing monooxygenase family protein YUCCA 10 0.64 0.32 -0.33
83 AT3G24340 chromatin remodeling 40 chromatin remodeling 40 0.64 0.32 -0.31
84 AT3G32180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G32160.1); Has 37 Blast hits
to 25 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.3 -0.32
85 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.34
86 AT2G29560 cytosolic enolase cytosolic enolase -0.64 0.33 -0.33
87 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.64 0.3 -0.31
88 AT3G58770 unknown protein; Has 38 Blast hits to 36 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.64 0.29 -0.32
89 AT4G04650 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.64 0.31 -0.3
90 AT3G32220 transposable element gene -0.64 0.32 -0.3
91 AT5G56130 Transducin/WD40 repeat-like superfamily protein AtTEX1, TEX1, THO3 -0.63 0.32 -0.31
92 AT4G18500 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.32 -0.32
93 AT3G55830 Nucleotide-diphospho-sugar transferases superfamily protein ECTOPICALLY PARTING CELLS -0.63 0.3 -0.32
94 AT5G03320 Protein kinase superfamily protein -0.63 0.33 -0.31
95 AT1G05270 TraB family protein -0.63 0.31 -0.32
96 AT5G38610 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.62 0.34 -0.31
97 AT2G39530 Uncharacterised protein family (UPF0497) -0.62 0.3 -0.32
98 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.61 0.31 -0.32
99 AT4G02190 Cysteine/Histidine-rich C1 domain family protein -0.61 0.29 -0.35
100 AT1G03250 unknown protein; Has 89 Blast hits to 89 proteins in 31
species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.61 0.31 -0.29
101 AT2G04000 transposable element gene -0.6 0.3 -0.29
102 AT1G18290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.3 -0.31
103 AT5G39510 Vesicle transport v-SNARE family protein VESICLE TRANSPORT V-SNARE 11,
ATVTI1A, SHOOT GRAVITROPSIM 4,
VESICLE TRANSPORT V-SNARE 11,
VTI1A, ZIG, ZIG1		 -0.6 0.32 -0.3
104 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3		 -0.6 0.32 -0.31
105 AT3G30720 qua-quine starch QUA-QUINE STARCH -0.6 0.3 -0.33
106 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.34 -0.31
107 AT5G09570 Cox19-like CHCH family protein -0.59 0.31 -0.33
108 AT3G52220 CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain
(InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins
in 346 species: Archae - 10; Bacteria - 184; Metazoa -
3955; Fungi - 1221; Plants - 712; Viruses - 24; Other
Eukaryotes - 2776 (source: NCBI BLink).		 -0.58 0.3 -0.31
109 AT5G16790 Tho complex subunit 7/Mft1p AtTHO7, THO7 -0.58 0.3 -0.33
110 AT5G57230 Thioredoxin superfamily protein -0.58 0.32 -0.29
111 AT4G35335 Nucleotide-sugar transporter family protein -0.58 0.31 -0.32
112 AT3G50120 Plant protein of unknown function (DUF247) -0.58 0.3 -0.33
113 AT2G18720 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 -0.58 0.3 -0.32
114 AT2G36090 F-box family protein -0.58 0.34 -0.3
115 AT1G17160 pfkB-like carbohydrate kinase family protein -0.57 0.3 -0.33
116 AT3G53620 pyrophosphorylase 4 pyrophosphorylase 4,
pyrophosphorylase 4		 -0.57 0.29 -0.3
117 AT3G28560 BCS1 AAA-type ATPase -0.57 0.31 -0.32
118 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.57 0.32 -0.31
119 AT1G09930 oligopeptide transporter 2 oligopeptide transporter 2,
oligopeptide transporter 2		 -0.57 0.32 -0.31