AT1G27900 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G27900
Description RNA helicase family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G27900 RNA helicase family protein 1 0.32 -0.31
2 AT5G53440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.71 0.33 -0.31
3 AT3G06480 DEAD box RNA helicase family protein 0.68 0.34 -0.31
4 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 0.67 0.3 -0.33
5 AT5G15700 DNA/RNA polymerases superfamily protein 0.66 0.31 -0.34
6 AT3G17120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits
to 67 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.32 -0.33
7 AT5G48120 ARM repeat superfamily protein 0.65 0.31 -0.33
8 AT3G11020 DRE/CRT-binding protein 2B DEHYDRATION-RESPONSIVE ELEMENT
BINDING PROTEIN 2, DRE/CRT-binding
protein 2B		 0.65 0.34 -0.33
9 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.31 -0.32
10 AT5G02560 histone H2A 12 histone H2A 12 -0.64 0.31 -0.33
11 AT4G24200 Transcription elongation factor (TFIIS) family protein 0.64 0.32 -0.31
12 AT1G77010 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.32 -0.31
13 AT5G56610 Phosphotyrosine protein phosphatases superfamily protein -0.63 0.34 -0.31
14 AT5G60030 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75335.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.3 -0.32
15 AT3G62240 RING/U-box superfamily protein 0.63 0.32 -0.3
16 AT5G01290 mRNA capping enzyme family protein 0.63 0.32 -0.32
17 AT5G52630 mitochondrial RNAediting factor 1 mitochondrial RNAediting factor 1 0.63 0.32 -0.33
18 AT4G23730 Galactose mutarotase-like superfamily protein -0.62 0.32 -0.33
19 AT5G05560 E3 ubiquitin ligase, putative EMBRYO DEFECTIVE 2771 0.61 0.32 -0.3
20 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein 0.61 0.32 -0.33
21 AT3G61430 plasma membrane intrinsic protein 1A ARABIDOPSIS THALIANA PLASMA
MEMBRANE INTRINSIC PROTEIN 1,
PLASMA MEMBRANE INTRINSIC PROTEIN
1, PLASMA MEMBRANE INTRINSIC
PROTEIN 1;1, plasma membrane
intrinsic protein 1A		 -0.61 0.32 -0.3
22 AT5G58920 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.33 -0.31
23 AT4G02480 AAA-type ATPase family protein 0.6 0.31 -0.29
24 AT4G02710 Kinase interacting (KIP1-like) family protein 0.6 0.32 -0.32
25 AT1G50200 Alanyl-tRNA synthetase ACD, Alanyl-tRNA synthetase 0.6 0.31 -0.32
26 AT4G30340 diacylglycerol kinase 7 diacylglycerol kinase 7,
diacylglycerol kinase 7		 -0.59 0.3 -0.31
27 AT3G52900 Family of unknown function (DUF662) -0.59 0.32 -0.32
28 AT3G66652 fip1 motif-containing protein 0.59 0.31 -0.32
29 AT5G28020 cysteine synthase D2 CYSTEINE SYNTHASE D2, cysteine
synthase D2		 -0.59 0.34 -0.34
30 AT5G49610 F-box family protein 0.58 0.29 -0.31
31 AT4G03550 glucan synthase-like 5 glucan synthase-like 5, ATGSL5,
GSL05, glucan synthase-like 5,
GLUCAN SYNTHASE-LIKE 5, POWDERY
MILDEW RESISTANT 4		 0.58 0.31 -0.32
32 AT5G06610 Protein of unknown function (DUF620) -0.57 0.31 -0.31
33 AT2G45960 plasma membrane intrinsic protein 1B ATHH2, NAMED PLASMA MEMBRANE
INTRINSIC PROTEIN 1;2, plasma
membrane intrinsic protein 1B,
TRANSMEMBRANE PROTEIN A		 -0.57 0.31 -0.32
34 AT1G06230 global transcription factor group E4 global transcription factor group
E4		 0.57 0.33 -0.31
35 AT1G27130 glutathione S-transferase tau 13 glutathione S-transferase tau 13,
GLUTATHIONE S-TRANSFERASE 12,
glutathione S-transferase tau 13		 -0.57 0.3 -0.32
36 AT1G76960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 8 growth stages; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.57 0.31 -0.32
37 AT3G56060 Glucose-methanol-choline (GMC) oxidoreductase family
protein		 -0.57 0.33 -0.31
38 AT5G61380 CCT motif -containing response regulator protein APRR1, TIMING OF CAB EXPRESSION 1,
PSEUDO-RESPONSE REGULATOR 1,
TIMING OF CAB EXPRESSION 1		 0.57 0.3 -0.28
39 AT1G72890 Disease resistance protein (TIR-NBS class) -0.56 0.32 -0.31
40 AT2G27090 Protein of unknown function (DUF630 and DUF632) 0.56 0.31 -0.32
41 AT1G15200 protein-protein interaction regulator family protein 0.56 0.34 -0.32
42 AT1G14680 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G09060.1); Has 8132 Blast hits
to 6366 proteins in 685 species: Archae - 171; Bacteria -
671; Metazoa - 4046; Fungi - 445; Plants - 318; Viruses -
23; Other Eukaryotes - 2458 (source: NCBI BLink).		 0.56 0.33 -0.31
43 AT5G01720 RNI-like superfamily protein 0.55 0.33 -0.29
44 AT1G68580 agenet domain-containing protein / bromo-adjacent homology
(BAH) domain-containing protein		 0.55 0.32 -0.32
45 AT5G52320 cytochrome P450, family 96, subfamily A, polypeptide 4 cytochrome P450, family 96,
subfamily A, polypeptide 4		 -0.55 0.33 -0.32
46 AT5G23860 tubulin beta 8 tubulin beta 8 -0.54 0.32 -0.33
47 AT4G00780 TRAF-like family protein -0.54 0.29 -0.34
48 AT3G08500 myb domain protein 83 myb domain protein 83, myb domain
protein 83		 -0.53 0.32 -0.31
49 AT3G19400 Cysteine proteinases superfamily protein -0.52 0.3 -0.31
50 AT5G42440 Protein kinase superfamily protein -0.5 0.31 -0.32
51 AT5G11300 mitotic-like cyclin 3B from Arabidopsis CYC2BAT, mitotic-like cyclin 3B
from Arabidopsis, CYCLIN A2;2		 -0.5 0.32 -0.32
52 AT3G17380 TRAF-like family protein -0.5 0.32 -0.31
53 AT3G61450 syntaxin of plants 73 ATSYP73, syntaxin of plants 73 -0.49 0.31 -0.32
54 AT3G55870 ADC synthase superfamily protein -0.49 0.32 -0.32
55 AT1G66360 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.48 0.29 -0.34
56 AT1G69080 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.47 0.34 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
57 C0144 Maltose D-Maltose α-Maltose starch degradation II 0.71 0.47 -0.46 C0144
58 C0214 PR_MST_2412.1 - - - 0.71 0.47 -0.43
59 C0173 MST_2301.7 - - - 0.7 0.45 -0.48
60 C0213 PR_MST_2410.2 - - - 0.66 0.45 -0.47
61 C0124 Isonicotinic acid - - - 0.64 0.45 -0.45