AT1G52300 : -
Query Information
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AGICode AT1G52300
Description Zinc-binding ribosomal protein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G52300 Zinc-binding ribosomal protein family protein 1 0.32 -0.3
2 AT2G33370 Ribosomal protein L14p/L23e family protein 0.89 0.32 -0.31
3 AT1G26880 Ribosomal protein L34e superfamily protein 0.89 0.33 -0.31
4 AT5G67510 Translation protein SH3-like family protein 0.88 0.29 -0.31
5 AT4G25740 RNA binding Plectin/S10 domain-containing protein 0.88 0.32 -0.3
6 AT2G39460 ribosomal protein L23AA ARABIDOPSIS THALIANA RIBOSOMAL
PROTEIN L23A, RIBOSOMAL PROTEIN
L23A, RIBOSOMAL PROTEIN L23A1,
ribosomal protein L23AA		 0.88 0.32 -0.32
7 AT5G39740 ribosomal protein L5 B OLIGOCELLULA 7, ribosomal protein
L5 B		 0.87 0.29 -0.34
8 AT2G37600 Ribosomal protein L36e family protein 0.87 0.34 -0.32
9 AT3G09630 Ribosomal protein L4/L1 family 0.87 0.31 -0.32
10 AT5G56710 Ribosomal protein L31e family protein 0.86 0.33 -0.32
11 AT3G52580 Ribosomal protein S11 family protein 0.86 0.32 -0.31
12 AT1G72370 40s ribosomal protein SA AP40, 40s ribosomal protein SA,
RP40, RPSAA		 0.86 0.31 -0.31
13 AT3G16080 Zinc-binding ribosomal protein family protein 0.86 0.31 -0.32
14 AT4G25890 60S acidic ribosomal protein family 0.85 0.31 -0.32
15 AT3G53430 Ribosomal protein L11 family protein 0.85 0.34 -0.33
16 AT3G04770 40s ribosomal protein SA B 40s ribosomal protein SA B 0.85 0.35 -0.29
17 AT2G36170 Ubiquitin supergroup;Ribosomal protein L40e 0.85 0.34 -0.34
18 AT4G38100 unknown protein; LOCATED IN: chloroplast thylakoid
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G01150.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.85 0.32 -0.31
19 AT3G44590 60S acidic ribosomal protein family 0.85 0.32 -0.3
20 AT2G45730 eukaryotic initiation factor 3 gamma subunit family protein 0.85 0.31 -0.32
21 AT1G07070 Ribosomal protein L35Ae family protein 0.85 0.31 -0.32
22 AT2G37190 Ribosomal protein L11 family protein 0.85 0.31 -0.32
23 AT3G06610 DNA-binding enhancer protein-related 0.85 0.33 -0.31
24 AT3G53740 Ribosomal protein L36e family protein 0.85 0.35 -0.33
25 AT3G07110 Ribosomal protein L13 family protein 0.85 0.3 -0.32
26 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit
family protein		 0.85 0.33 -0.3
27 AT1G17560 Ribosomal protein L14p/L23e family protein HUELLENLOS 0.84 0.32 -0.3
28 AT3G28900 Ribosomal protein L34e superfamily protein 0.84 0.33 -0.31
29 AT3G16780 Ribosomal protein L19e family protein 0.84 0.31 -0.31
30 AT5G47210 Hyaluronan / mRNA binding family 0.84 0.31 -0.3
31 AT3G60245 Zinc-binding ribosomal protein family protein 0.84 0.3 -0.32
32 AT1G27400 Ribosomal protein L22p/L17e family protein 0.83 0.31 -0.31
33 AT3G11510 Ribosomal protein S11 family protein 0.83 0.33 -0.31
34 AT1G01100 60S acidic ribosomal protein family 0.83 0.3 -0.31
35 AT4G17390 Ribosomal protein L23/L15e family protein 0.82 0.3 -0.31
36 AT1G07370 proliferating cellular nuclear antigen 1 PROLIFERATING CELLULAR NUCLEAR
ANTIGEN 1, proliferating cellular
nuclear antigen 1		 0.82 0.3 -0.31
37 AT3G59540 Ribosomal L38e protein family 0.81 0.32 -0.29
38 AT1G61580 R-protein L3 B ARABIDOPSIS RIBOSOMAL PROTEIN 2,
R-protein L3 B		 0.81 0.32 -0.35
39 AT1G31860 histidine biosynthesis bifunctional protein (HISIE) AT-IE, HISTIDINE BIOSYNTHESIS 2 0.81 0.32 -0.31
40 AT5G15200 Ribosomal protein S4 0.81 0.32 -0.32
41 AT3G49590 Autophagy-related protein 13 autophagy-related 13 -0.81 0.31 -0.32
42 AT1G62310 transcription factor jumonji (jmjC) domain-containing
protein		 -0.8 0.32 -0.31
43 AT2G37860 Protein of unknown function (DUF3411) LOWER CELL DENSITY 1 0.8 0.32 -0.31
44 AT4G34740 GLN phosphoribosyl pyrophosphate amidotransferase 2 GLN phosphoribosyl pyrophosphate
amidotransferase 2, GLN
phosphoribosyl pyrophosphate
amidotransferase 2, ATPURF2,
CHLOROPLAST IMPORT APPARATUS 1		 0.8 0.31 -0.3
45 AT5G20920 eukaryotic translation initiation factor 2 beta subunit eukaryotic translation initiation
factor 2 beta subunit, embryo
defective 1401		 0.8 0.33 -0.29
46 AT5G23740 ribosomal protein S11-beta ribosomal protein S11-beta 0.8 0.32 -0.33
47 AT5G59850 Ribosomal protein S8 family protein 0.8 0.31 -0.32
48 AT3G06700 Ribosomal L29e protein family 0.8 0.34 -0.33
49 AT5G64816 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.79 0.34 -0.32
50 AT2G32150 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.79 0.33 -0.31
51 AT1G04190 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 3 0.79 0.32 -0.29
52 AT5G49660 Leucine-rich repeat transmembrane protein kinase family
protein		 XYLEM INTERMIXED WITH PHLOEM 1 -0.79 0.33 -0.3
53 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 0.79 0.32 -0.29
54 AT2G25625 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED
DURING: LP.06 six leaves visible, LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage; Has 24 Blast hits to 24 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.78 0.33 -0.31
55 AT3G58470 nucleic acid binding;methyltransferases 0.78 0.32 -0.3
56 AT2G47790 Transducin/WD40 repeat-like superfamily protein 0.78 0.33 -0.33
57 AT1G15250 Zinc-binding ribosomal protein family protein 0.78 0.3 -0.3
58 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein -0.78 0.32 -0.31
59 AT5G27700 Ribosomal protein S21e 0.78 0.34 -0.31
60 AT2G22430 homeobox protein 6 homeobox protein 6, homeobox
protein 6		 -0.77 0.32 -0.32
61 AT3G14050 RELA/SPOT homolog 2 RELA-SPOT HOMOLOG 2, RELA/SPOT
HOMOLOG 2, RELA/SPOT homolog 2		 -0.76 0.32 -0.32
62 AT3G53960 Major facilitator superfamily protein -0.76 0.33 -0.32
63 AT2G38790 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.76 0.3 -0.32
64 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.76 0.32 -0.32
65 AT2G27830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits
to 131 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.76 0.29 -0.31
66 AT2G17700 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase 8 -0.75 0.3 -0.33
67 AT1G55110 indeterminate(ID)-domain 7 indeterminate(ID)-domain 7,
indeterminate(ID)-domain 7		 -0.75 0.28 -0.32
68 AT5G46350 WRKY DNA-binding protein 8 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 8, WRKY
DNA-binding protein 8		 -0.74 0.31 -0.32
69 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 -0.74 0.31 -0.31
70 AT4G36040 Chaperone DnaJ-domain superfamily protein DnaJ11 -0.74 0.33 -0.31
71 AT3G06170 Serinc-domain containing serine and sphingolipid
biosynthesis protein		 -0.73 0.32 -0.32
72 AT2G40460 Major facilitator superfamily protein -0.73 0.31 -0.34
73 AT2G22300 signal responsive 1 CALMODULIN-BINDING TRANSCRIPTION
ACTIVATOR 3, signal responsive 1		 -0.72 0.29 -0.32
74 AT2G20920 Protein of unknown function (DUF3353) -0.72 0.31 -0.33
75 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 -0.72 0.3 -0.32
76 AT3G47960 Major facilitator superfamily protein -0.72 0.31 -0.31
77 AT5G13640 phospholipid:diacylglycerol acyltransferase ARABIDOPSIS THALIANA
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE,
phospholipid:diacylglycerol
acyltransferase,
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE 1		 -0.71 0.3 -0.32
78 AT4G18160 Ca2+ activated outward rectifying K+ channel 6 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 6, ATTPK3, Ca2+
activated outward rectifying K+
channel 6, TPK3		 -0.71 0.3 -0.32
79 AT5G54730 homolog of yeast autophagy 18 (ATG18) F ARABIDOPSIS THALIANA HOMOLOG OF
YEAST AUTOPHAGY 18 (ATG18) F,
homolog of yeast autophagy 18
(ATG18) F, homolog of yeast
autophagy 18 (ATG18) F		 -0.71 0.3 -0.32
80 AT1G76130 alpha-amylase-like 2 alpha-amylase-like 2, ARABIDOPSIS
THALIANA ALPHA-AMYLASE-LIKE 2		 -0.7 0.32 -0.31
81 AT5G01200 Duplicated homeodomain-like superfamily protein -0.69 0.32 -0.34
82 AT4G28085 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.69 0.33 -0.31
83 AT2G25490 EIN3-binding F box protein 1 EIN3-binding F box protein 1, FBL6 -0.69 0.33 -0.32
84 AT5G19420 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 -0.69 0.33 -0.31
85 AT1G68910 WPP domain-interacting protein 2 WPP domain-interacting protein 2 -0.69 0.32 -0.32
86 AT3G52800 A20/AN1-like zinc finger family protein -0.69 0.3 -0.31
87 AT5G27280 Zim17-type zinc finger protein -0.69 0.33 -0.34
88 AT5G16730 Plant protein of unknown function (DUF827) -0.69 0.33 -0.34
89 AT3G29350 histidine-containing phosphotransmitter 2 histidine-containing
phosphotransmitter 2		 -0.68 0.32 -0.31
90 AT2G45910 U-box domain-containing protein kinase family protein -0.68 0.31 -0.31
91 AT4G30790 INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Autophagy-related protein 17
(InterPro:IPR007240), Autophagy-related protein 11
(InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins
in 570 species: Archae - 89; Bacteria - 657; Metazoa -
4844; Fungi - 808; Plants - 441; Viruses - 15; Other
Eukaryotes - 1939 (source: NCBI BLink).		 -0.68 0.34 -0.31
92 AT3G03870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits
to 41 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.29 -0.31
93 AT5G01820 serine/threonine protein kinase 1 ATCIPK14, serine/threonine protein
kinase 1, CBL-INTERACTING PROTEIN
KINASE 14, SOS2-like protein
kinase 24, SNF1-RELATED PROTEIN
KINASE 3.15, serine/threonine
protein kinase 1		 -0.68 0.33 -0.34
94 AT3G21270 DOF zinc finger protein 2 DOF zinc finger protein 2, DOF
zinc finger protein 2		 -0.68 0.31 -0.32
95 AT1G54130 RELA/SPOT homolog 3 AT-RSH3, RELA/SPOT HOMOLOG 3,
RELA/SPOT homolog 3		 -0.68 0.32 -0.34
96 AT2G20740 Tetraspanin family protein -0.68 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0257 Tryptophan L-Tryptophan L-Tryptophan glucosinolate biosynthesis from tryptophan,
IAA biosynthesis I,
tryptophan biosynthesis,
camalexin biosynthesis,
tRNA charging 		-0.71 0.32 -0.3 C0257