AT1G47990 : Arabidopsis thaliana gibberellin 2-oxidase 4
Query Information
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AGICode AT1G47990
Description gibberellin 2-oxidase 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G47990 gibberellin 2-oxidase 4 Arabidopsis thaliana gibberellin
2-oxidase 4, gibberellin 2-oxidase
4		 1 0.32 -0.32
2 AT5G10510 AINTEGUMENTA-like 6 AINTEGUMENTA-like 6, PLETHORA 3 0.8 0.32 -0.31
3 AT3G55920 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.77 0.32 -0.31
4 AT5G01870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.75 0.32 -0.33
5 AT2G46950 cytochrome P450, family 709, subfamily B, polypeptide 2 cytochrome P450, family 709,
subfamily B, polypeptide 2		 0.73 0.31 -0.34
6 AT4G37295 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, root, leaf;
EXPRESSED DURING: LP.06 six leaves visible, LP.04 four
leaves visible; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.72 0.33 -0.32
7 AT2G42430 lateral organ boundaries-domain 16 ASYMMETRIC LEAVES2-LIKE 18,
lateral organ boundaries-domain 16		 0.71 0.32 -0.32
8 AT4G08150 KNOTTED-like from Arabidopsis thaliana BREVIPEDICELLUS, BREVIPEDICELLUS
1, KNOTTED-like from Arabidopsis
thaliana		 0.7 0.3 -0.35
9 AT1G09380 nodulin MtN21 /EamA-like transporter family protein 0.69 0.32 -0.32
10 AT4G37650 GRAS family transcription factor SHOOT GRAVITROPISM 7, SHORT ROOT 0.69 0.31 -0.32
11 AT4G13195 CLAVATA3/ESR-RELATED 44 CLAVATA3/ESR-RELATED 44 0.69 0.32 -0.31
12 AT3G19200 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits
to 51 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.34
13 AT2G35920 RNA helicase family protein 0.68 0.34 -0.32
14 AT5G60880 breaking of asymmetry in the stomatal lineage BREAKING OF ASYMMETRY IN THE
STOMATAL LINEAGE		 -0.68 0.29 -0.33
15 AT1G05577 Domain of unknown function (DUF966) 0.68 0.33 -0.32
16 AT2G38370 Plant protein of unknown function (DUF827) 0.67 0.34 -0.34
17 AT1G67030 zinc finger protein 6 zinc finger protein 6 0.67 0.32 -0.32
18 AT1G24020 MLP-like protein 423 MLP-like protein 423 -0.67 0.32 -0.31
19 AT1G76500 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 29, SUPPRESSOR OF PHYB-4#3		 0.67 0.3 -0.32
20 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 0.67 0.32 -0.32
21 AT5G53210 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 SPEECHLESS -0.66 0.32 -0.32
22 AT3G15300 VQ motif-containing protein 0.66 0.29 -0.32
23 AT1G30760 FAD-binding Berberine family protein 0.66 0.29 -0.33
24 AT1G34110 Leucine-rich receptor-like protein kinase family protein 0.66 0.32 -0.3
25 AT1G31690 Copper amine oxidase family protein -0.66 0.32 -0.32
26 AT4G36260 Lateral root primordium (LRP) protein-related SHI RELATED SEQUENCE 2, STYLISH 2 0.65 0.33 -0.3
27 AT2G22420 Peroxidase superfamily protein 0.65 0.32 -0.33
28 AT3G57600 Integrase-type DNA-binding superfamily protein -0.65 0.31 -0.31
29 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23		 0.65 0.33 -0.29
30 AT3G62100 indole-3-acetic acid inducible 30 indole-3-acetic acid inducible 30 0.64 0.32 -0.31
31 AT1G79580 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 Arabidopsis NAC domain containing
protein 33, SOMBRERO		 0.64 0.31 -0.31
32 AT1G19850 Transcriptional factor B3 family protein / auxin-responsive
factor AUX/IAA-related		 AUXIN RESPONSE FACTOR 5,
indole-3-acetic acid inducible 24,
MONOPTEROS		 0.64 0.32 -0.33
33 AT2G45420 LOB domain-containing protein 18 LOB domain-containing protein 18 0.63 0.31 -0.32
34 AT3G24450 Heavy metal transport/detoxification superfamily protein 0.63 0.3 -0.32
35 AT3G49380 IQ-domain 15 IQ-domain 15 0.63 0.32 -0.34
36 AT5G03390 Protein of unknown function (DUF295) -0.62 0.31 -0.33
37 AT2G02850 plantacyanin plantacyanin 0.62 0.32 -0.31
38 AT1G08430 aluminum-activated malate transporter 1 aluminum-activated malate
transporter 1, ARABIDOPSIS
THALIANA ALUMINUM-ACTIVATED MALATE
TRANSPORTER 1		 0.62 0.33 -0.32
39 AT1G75520 SHI-related sequence 5 SHI-related sequence 5 0.62 0.3 -0.31
40 AT2G02070 indeterminate(ID)-domain 5 indeterminate(ID)-domain 5,
indeterminate(ID)-domain 5		 -0.62 0.31 -0.33
41 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 0.62 0.32 -0.32
42 AT1G31690 Copper amine oxidase family protein -0.62 0.3 -0.31
43 AT5G13910 Integrase-type DNA-binding superfamily protein LEAFY PETIOLE 0.61 0.31 -0.33
44 AT1G73590 Auxin efflux carrier family protein ARABIDOPSIS THALIANA PIN-FORMED 1,
PIN-FORMED 1		 0.61 0.29 -0.32
45 AT5G48110 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.61 0.31 -0.31
46 AT5G43690 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.32 -0.32
47 AT5G47600 HSP20-like chaperones superfamily protein 0.6 0.32 -0.33
48 AT4G37890 Zinc finger (C3HC4-type RING finger) family protein embryo sac development arrest 40 0.6 0.31 -0.3
49 AT1G62500 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.59 0.31 -0.33
50 AT5G02420 unknown protein; Has 90 Blast hits to 90 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.32 -0.32
51 AT4G09940 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.59 0.32 -0.34
52 AT3G28680 Serine carboxypeptidase S28 family protein -0.58 0.31 -0.32
53 AT4G12910 serine carboxypeptidase-like 20 serine carboxypeptidase-like 20 0.58 0.31 -0.3
54 AT1G30070 SGS domain-containing protein 0.58 0.31 -0.33
55 AT1G33790 jacalin lectin family protein 0.58 0.33 -0.35
56 AT5G57810 tetraspanin15 tetraspanin15 0.57 0.3 -0.34
57 AT3G12070 RAB geranylgeranyl transferase beta subunit 2 RAB geranylgeranyl transferase
beta subunit 2, RAB geranylgeranyl
transferase beta subunit 2		 0.57 0.29 -0.32
58 AT1G27620 HXXXD-type acyl-transferase family protein 0.57 0.32 -0.3
59 AT5G49760 Leucine-rich repeat protein kinase family protein -0.57 0.3 -0.31
60 AT2G18490 C2H2-like zinc finger protein 0.56 0.3 -0.32
61 AT3G60650 unknown protein; Has 10 Blast hits to 10 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.31 -0.29
62 AT5G06080 LOB domain-containing protein 33 LOB domain-containing protein 33 0.56 0.31 -0.32
63 AT5G10850 transposable element gene 0.56 0.31 -0.3
64 AT5G03860 malate synthase malate synthase 0.56 0.33 -0.31
65 AT4G19980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING:
4 anthesis; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.56 0.35 -0.31
66 AT2G32280 Protein of unknown function (DUF1218) 0.56 0.33 -0.32
67 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.55 0.32 -0.33
68 AT2G36590 proline transporter 3 PROLINE TRANSPORTER 3, proline
transporter 3		 -0.55 0.34 -0.33
69 AT4G36710 GRAS family transcription factor Arabidopsis thaliana HAIRY
MERISTEM 4, HAM4		 -0.55 0.33 -0.32
70 AT2G34650 Protein kinase superfamily protein ABRUPTUS, PINOID 0.55 0.32 -0.3
71 AT1G51190 Integrase-type DNA-binding superfamily protein PLETHORA 2 0.55 0.3 -0.33
72 AT5G23530 carboxyesterase 18 carboxyesterase 18,
carboxyesterase 18		 0.55 0.31 -0.3
73 AT2G24390 AIG2-like (avirulence induced gene) family protein -0.54 0.31 -0.31
74 AT2G30670 NAD(P)-binding Rossmann-fold superfamily protein -0.54 0.31 -0.32
75 AT1G77270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G07730.1); Has 428 Blast hits
to 388 proteins in 92 species: Archae - 0; Bacteria - 31;
Metazoa - 189; Fungi - 10; Plants - 97; Viruses - 0; Other
Eukaryotes - 101 (source: NCBI BLink).		 -0.54 0.35 -0.33
76 AT2G28810 Dof-type zinc finger DNA-binding family protein -0.54 0.33 -0.31
77 AT5G36280 BEST Arabidopsis thaliana protein match is: mitochondrial
acyl carrier protein 2 (TAIR:AT1G65290.1); Has 1807 Blast
hits to 1807 proteins in 277 species: Archae - 0; Bacteria
- 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.54 0.32 -0.33
78 AT4G09930 Avirulence induced gene (AIG1) family protein -0.54 0.31 -0.32
79 AT4G15210 beta-amylase 5 AT-BETA-AMY, ARABIDOPSIS THALIANA
BETA-AMYLASE, beta-amylase 5,
BMY1, REDUCED BETA AMYLASE 1		 -0.53 0.3 -0.33
80 AT2G45680 TCP family transcription factor -0.53 0.3 -0.3
81 AT3G48740 Nodulin MtN3 family protein AtSWEET11, SWEET11 -0.53 0.32 -0.34
82 AT2G23830 PapD-like superfamily protein -0.52 0.31 -0.34
83 AT5G18240 myb-related protein 1 ARABIDOPSIS MYB-RELATED PROTEIN 1,
myb-related protein 1		 -0.51 0.32 -0.32
84 AT3G03090 vacuolar glucose transporter 1 vacuolar glucose transporter 1,
vacuolar glucose transporter 1		 -0.51 0.31 -0.32
85 AT5G28870 transposable element gene -0.51 0.3 -0.31
86 AT1G34290 receptor like protein 5 receptor like protein 5, receptor
like protein 5		 -0.51 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
87 C0151 Monogalactosyldiacylgycerol-34:4 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.68 0.52 -0.5 C0151
88 C0083 Digalactosyldiacylglycerol-36:4 - Digalactosyldiacylglycerol-36:4 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.65 0.51 -0.5 C0083
89 C0081 Digalactosyldiacylglycerol-36:2 - Digalactosyldiacylglycerol-36:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.65 0.5 -0.47 C0081
90 C0213 PR_MST_2410.2 - - - 0.62 0.43 -0.43
91 C0048 8-Methylsulfinyl-n-octylglucosinolate - 8-Methylsulfinyloctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine -0.62 0.33 -0.3 C0048
92 C0040 6-Methylsulfinyl-n-hexylglucosinolate - 6-Methylsulfinylhexyl glucosinolate glucosinolate biosynthesis from tetrahomomethionine -0.54 0.33 -0.33 C0040