AT1G43010 : -
Query Information
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AGICode AT1G43010
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein 1 0.32 -0.3
2 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.79 0.31 -0.32
3 AT2G19200 unknown protein 0.79 0.32 -0.33
4 AT1G55540 Nuclear pore complex protein 0.76 0.29 -0.32
5 AT2G01710 Chaperone DnaJ-domain superfamily protein -0.76 0.32 -0.31
6 AT4G20330 Transcription initiation factor TFIIE, beta subunit -0.75 0.32 -0.28
7 AT5G45130 RAB homolog 1 ARABIDOPSIS RAB HOMOLOG F2A,
ATRAB5A, ATRABF2A, RAB HOMOLOG
F2A, RAB5A, RABF2A, RAB homolog 1		 -0.75 0.31 -0.29
8 AT3G25560 NSP-interacting kinase 2 NSP-interacting kinase 2 0.74 0.32 -0.31
9 AT4G39110 Malectin/receptor-like protein kinase family protein 0.74 0.32 -0.3
10 AT3G27430 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBB1 -0.74 0.33 -0.32
11 AT3G02070 Cysteine proteinases superfamily protein -0.74 0.31 -0.31
12 AT5G12890 UDP-Glycosyltransferase superfamily protein -0.74 0.33 -0.31
13 AT1G01820 peroxin 11c peroxin 11c -0.74 0.32 -0.33
14 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 -0.74 0.31 -0.32
15 AT5G56750 N-MYC downregulated-like 1 N-MYC downregulated-like 1 -0.73 0.32 -0.33
16 AT3G55140 Pectin lyase-like superfamily protein -0.73 0.3 -0.31
17 AT3G53970 proteasome inhibitor-related -0.73 0.3 -0.33
18 AT5G40580 20S proteasome beta subunit PBB2 20S proteasome beta subunit PBB2 -0.73 0.31 -0.3
19 AT2G28260 cyclic nucleotide-gated channel 15 cyclic nucleotide-gated channel
15, cyclic nucleotide-gated
channel 15		 0.73 0.3 -0.31
20 AT1G11070 BEST Arabidopsis thaliana protein match is:
Hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in
152 species: Archae - 0; Bacteria - 68; Metazoa - 159;
Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes -
67 (source: NCBI BLink).		 0.73 0.34 -0.3
21 AT2G01410 NHL domain-containing protein -0.72 0.32 -0.33
22 AT1G20860 phosphate transporter 1;8 phosphate transporter 1;8 0.72 0.32 -0.33
23 AT3G30570 transposable element gene 0.72 0.33 -0.31
24 AT3G17880 tetraticopeptide domain-containing thioredoxin ARABIDOPSIS THALIANA
HSP70-INTERACTING PROTEIN 2,
tetraticopeptide domain-containing
thioredoxin, HSC-70 INTERACTING
PROTEIN, tetraticopeptide
domain-containing thioredoxin		 -0.71 0.32 -0.31
25 AT3G18820 RAB GTPase homolog G3F RAB GTPase homolog G3F, ATRABG3F,
RAB71, RAB7B, RAB GTPase homolog
G3F, RABG3F		 -0.71 0.3 -0.31
26 AT3G16785 phospholipase D P1 PHOSPHOLIPASE D ZETA 1,
phospholipase D P1, PHOSPHOLIPASE
D ZETA1, PLDZETA1		 -0.71 0.3 -0.31
27 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 0.71 0.32 -0.31
28 AT2G29890 villin-like 1 ATVLN1, villin 1 0.71 0.31 -0.31
29 AT4G13790 SAUR-like auxin-responsive protein family -0.7 0.31 -0.32
30 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 -0.7 0.33 -0.32
31 AT1G28280 VQ motif-containing protein -0.7 0.32 -0.3
32 AT5G64130 cAMP-regulated phosphoprotein 19-related protein -0.7 0.3 -0.34
33 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 -0.7 0.29 -0.31
34 AT1G32790 CTC-interacting domain 11 CTC-interacting domain 11 -0.7 0.31 -0.34
35 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 -0.7 0.32 -0.32
36 AT5G56170 LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 LORELEI-LIKE-GPI-ANCHORED PROTEIN
1		 -0.69 0.32 -0.32
37 AT1G63180 UDP-D-glucose/UDP-D-galactose 4-epimerase 3 UDP-D-glucose/UDP-D-galactose
4-epimerase 3		 -0.69 0.29 -0.32
38 AT2G42680 multiprotein bridging factor 1A ARABIDOPSIS THALIANA MULTIPROTEIN
BRIDGING FACTOR 1A, multiprotein
bridging factor 1A		 -0.69 0.31 -0.29
39 AT3G52120 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein / D111/G-patch domain-containing protein		 -0.69 0.31 -0.32
40 AT1G61150 LisH and RanBPM domains containing protein -0.69 0.32 -0.3
41 AT3G24515 ubiquitin-conjugating enzyme 37 ubiquitin-conjugating enzyme 37 0.69 0.31 -0.3
42 AT1G18210 Calcium-binding EF-hand family protein -0.69 0.31 -0.32
43 AT3G53930 Protein kinase superfamily protein -0.69 0.32 -0.32
44 ATCG00280 photosystem II reaction center protein C photosystem II reaction center
protein C		 0.68 0.34 -0.29
45 AT1G77770 Protein of unknown function (DUF1644) -0.68 0.32 -0.3
46 AT3G04970 DHHC-type zinc finger family protein -0.68 0.34 -0.31
47 AT3G09085 Protein of unknown function (DUF962) -0.68 0.31 -0.28
48 AT1G15460 HCO3- transporter family ARABIDOPSIS THALIANA REQUIRES HIGH
BORON 4, REQUIRES HIGH BORON 4		 0.68 0.32 -0.31
49 AT3G51990 Protein kinase superfamily protein -0.68 0.33 -0.32
50 AT5G22950 SNF7 family protein VPS24.1 -0.68 0.31 -0.31
51 AT2G31320 poly(ADP-ribose) polymerase 2 ATPARP2, poly(ADP-ribose)
polymerase 2		 0.68 0.31 -0.33
52 AT1G49520 SWIB complex BAF60b domain-containing protein -0.68 0.3 -0.3
53 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 -0.67 0.32 -0.33
54 AT5G53330 Ubiquitin-associated/translation elongation factor EF1B
protein		 -0.67 0.33 -0.31
55 AT3G18430 Calcium-binding EF-hand family protein -0.67 0.32 -0.31
56 AT4G11260 phosphatase-related ATSGT1B, ENHANCED DOWNY MILDEW 1,
ENHANCER OF TIR1-1 AUXIN
RESISTANCE 3, RPR1, SGT1B		 -0.67 0.31 -0.31
57 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 0.67 0.33 -0.3
58 AT2G29220 Concanavalin A-like lectin protein kinase family protein 0.67 0.33 -0.34
59 AT3G06760 Drought-responsive family protein -0.66 0.3 -0.31
60 AT3G42790 alfin-like 3 alfin-like 3 -0.66 0.32 -0.34
61 AT4G24990 Ubiquitin family protein ATGP4 -0.66 0.31 -0.33
62 AT1G26830 cullin 3 cullin 3, cullin 3A, cullin 3,
cullin 3A		 -0.66 0.33 -0.33
63 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 -0.66 0.3 -0.32
64 AT4G30600 signal recognition particle receptor alpha subunit family
protein		 -0.66 0.31 -0.31
65 AT1G33000 transposable element gene 0.66 0.32 -0.31
66 AT4G28420 Tyrosine transaminase family protein 0.66 0.33 -0.31
67 AT4G14490 SMAD/FHA domain-containing protein 0.66 0.32 -0.33
68 AT5G42790 proteasome alpha subunit F1 ARSENIC TOLERANCE 5, ATPSM30,
proteasome alpha subunit F1		 -0.66 0.31 -0.29
69 AT1G04960 Protein of unknown function (DUF1664) -0.66 0.31 -0.32
70 AT2G30740 Protein kinase superfamily protein -0.66 0.32 -0.31
71 AT5G58840 Subtilase family protein -0.66 0.3 -0.32
72 AT4G10100 co-factor for nitrate, reductase and xanthine dehydrogenase
7		 co-factor for nitrate, reductase
and xanthine dehydrogenase 7, SIR5		 -0.66 0.31 -0.31
73 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.66 0.32 -0.33
74 AT2G24360 Protein kinase superfamily protein -0.66 0.31 -0.32
75 AT5G26990 Drought-responsive family protein -0.65 0.31 -0.32
76 AT4G04800 methionine sulfoxide reductase B3 methionine sulfoxide reductase B3,
methionine sulfoxide reductase B3		 -0.65 0.31 -0.31
77 AT1G74640 alpha/beta-Hydrolases superfamily protein -0.65 0.32 -0.32
78 AT5G18110 novel cap-binding protein novel cap-binding protein -0.65 0.33 -0.3
79 AT2G35010 thioredoxin O1 thioredoxin O1, thioredoxin O1 -0.65 0.33 -0.31
80 AT3G25500 formin homology 1 formin homology 1, AHF1,
ARABIDOPSIS THALIANA FORMIN
HOMOLOGY 1, FORMIN HOMOLOGY 1		 0.65 0.32 -0.32
81 AT1G11280 S-locus lectin protein kinase family protein 0.65 0.31 -0.34
82 AT1G74330 Protein kinase superfamily protein -0.65 0.32 -0.3
83 AT5G22690 Disease resistance protein (TIR-NBS-LRR class) family -0.65 0.29 -0.31
84 AT4G02390 poly(ADP-ribose) polymerase poly(ADP-ribose) polymerase,
ATPARP1, POLY(ADP-RIBOSE)
POLYMERASE 1, poly(ADP-ribose)
polymerase		 0.65 0.33 -0.31
85 AT4G31300 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBA1 -0.65 0.34 -0.31
86 AT5G20690 Leucine-rich repeat protein kinase family protein 0.65 0.33 -0.29
87 AT1G29060 Target SNARE coiled-coil domain protein -0.65 0.3 -0.34
88 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 -0.65 0.31 -0.3
89 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 -0.64 0.32 -0.31
90 AT2G35730 Heavy metal transport/detoxification superfamily protein -0.64 0.33 -0.31
91 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A -0.64 0.34 -0.31
92 AT2G42350 RING/U-box superfamily protein -0.64 0.33 -0.32
93 AT1G29040 unknown protein; LOCATED IN: chloroplast, vacuole;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Conserved
hypothetical protein CHP02058 (InterPro:IPR011719); Has 344
Blast hits to 344 proteins in 122 species: Archae - 2;
Bacteria - 227; Metazoa - 0; Fungi - 0; Plants - 32;
Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink).		 -0.64 0.33 -0.33
94 AT3G02520 general regulatory factor 7 GF14 NU, general regulatory factor
7		 -0.64 0.3 -0.31
95 AT2G33610 switch subunit 3 switch subunit 3, CHROMATIN
REMODELING COMPLEX SUBUNIT B,
switch subunit 3		 -0.64 0.33 -0.32
96 AT3G50590 Transducin/WD40 repeat-like superfamily protein -0.64 0.32 -0.33
97 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.64 0.32 -0.3
98 AT1G06740 transposable element gene 0.64 0.32 -0.31
99 AT3G61790 Protein with RING/U-box and TRAF-like domains -0.64 0.33 -0.33
100 AT1G73930 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1630 (InterPro:IPR012860); Has 290
Blast hits to 263 proteins in 104 species: Archae - 0;
Bacteria - 0; Metazoa - 148; Fungi - 30; Plants - 49;
Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).		 0.64 0.31 -0.3
101 AT1G31630 AGAMOUS-like 86 AGAMOUS-like 86 -0.64 0.31 -0.3
102 AT3G48940 Remorin family protein 0.63 0.29 -0.32
103 AT2G06230 transposable element gene 0.63 0.29 -0.31
104 AT1G17460 TRF-like 3 TRF-like 3 0.63 0.34 -0.31
105 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.63 0.32 -0.3
106 AT2G07728 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cultured cell;
Has 1 Blast hits to 1 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.32 -0.33
107 AT5G38500 Domain of unknown function (DUF313) 0.62 0.29 -0.33
108 AT2G04380 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.3 -0.33
109 AT5G27940 WPP domain protein 3 WPP domain protein 3 0.62 0.32 -0.3
110 AT5G45880 Pollen Ole e 1 allergen and extensin family protein 0.62 0.32 -0.32
111 AT4G35590 RWP-RK domain-containing protein RWP-RK domain-containing 5 0.62 0.31 -0.29
112 AT3G09430 unknown protein; Has 17 Blast hits to 17 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.3 -0.34
113 AT2G07490 transposable element gene 0.62 0.31 -0.34
114 AT1G32030 Domain of unknown function (DUF313) 0.61 0.32 -0.31
115 AT5G17960 Cysteine/Histidine-rich C1 domain family protein 0.61 0.31 -0.3
116 AT4G19350 embryo defective 3006 embryo defective 3006 0.61 0.3 -0.33
117 AT1G75730 unknown protein; Has 327 Blast hits to 272 proteins in 89
species: Archae - 0; Bacteria - 129; Metazoa - 68; Fungi -
14; Plants - 20; Viruses - 0; Other Eukaryotes - 96
(source: NCBI BLink).		 0.61 0.3 -0.3
118 AT5G28700 transposable element gene 0.61 0.31 -0.31
119 AT3G24650 AP2/B3-like transcriptional factor family protein ABA INSENSITIVE 3, ABSCISIC ACID
INSENSITIVE 3, SUGAR INSENSITIVE
10		 0.6 0.31 -0.3
120 AT3G55690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39870.1); Has 76 Blast hits
to 69 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 3; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.33 -0.32
121 AT2G12870 transposable element gene 0.6 0.33 -0.3
122 AT4G27790 Calcium-binding EF hand family protein 0.6 0.32 -0.3
123 AT4G30770 Putative membrane lipoprotein 0.59 0.34 -0.31
124 AT3G01880 Plant protein of unknown function (DUF946) 0.59 0.31 -0.31
125 AT3G24540 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 3, proline-rich
extensin-like receptor kinase 3		 0.59 0.29 -0.31
126 AT2G10390 transposable element gene 0.59 0.33 -0.29
127 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.59 0.33 -0.31
128 AT1G52180 Aquaporin-like superfamily protein 0.59 0.32 -0.3
129 AT4G14530 BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97
(TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.34 -0.29
130 AT5G56700 FBD / Leucine Rich Repeat domains containing protein 0.59 0.31 -0.3
131 AT2G38590 F-box and associated interaction domains-containing protein 0.59 0.33 -0.3