AT1G42700 : -
Query Information
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AGICode AT1G42700
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cold; LOCATED IN: nucleus; BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 1 0.33 -0.33
2 AT1G09370 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.68 0.3 -0.31
3 AT1G63190 Cystatin/monellin superfamily protein 0.67 0.31 -0.3
4 AT1G14310 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.66 0.32 -0.33
5 AT3G46350 Leucine-rich repeat protein kinase family protein -0.66 0.32 -0.31
6 AT3G18770 Autophagy-related protein 13 0.65 0.31 -0.31
7 AT4G07920 transposable element gene -0.65 0.3 -0.31
8 AT5G26700 RmlC-like cupins superfamily protein 0.65 0.32 -0.32
9 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 0.65 0.31 -0.32
10 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 0.64 0.3 -0.3
11 AT1G74310 heat shock protein 101 heat shock protein 101, HOT1, heat
shock protein 101		 0.63 0.31 -0.29
12 AT1G21510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: cotyledon; Has
380 Blast hits to 286 proteins in 63 species: Archae - 0;
Bacteria - 6; Metazoa - 254; Fungi - 44; Plants - 13;
Viruses - 5; Other Eukaryotes - 58 (source: NCBI BLink).		 -0.63 0.33 -0.32
13 AT3G61740 SET domain protein 14 ATX3, SET domain protein 14 0.62 0.32 -0.34
14 AT5G29020 transposable element gene -0.62 0.33 -0.32
15 AT4G24500 hydroxyproline-rich glycoprotein family protein -0.61 0.33 -0.32
16 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 -0.61 0.31 -0.3
17 AT5G06580 FAD-linked oxidases family protein -0.61 0.31 -0.33
18 AT4G18770 myb domain protein 98 myb domain protein 98, myb domain
protein 98		 0.61 0.31 -0.3
19 AT3G47630 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 325
Blast hits to 325 proteins in 172 species: Archae - 0;
Bacteria - 0; Metazoa - 109; Fungi - 140; Plants - 43;
Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).		 -0.61 0.3 -0.31
20 AT2G19630 F-box and associated interaction domains-containing protein 0.6 0.32 -0.32
21 AT3G30370 CONTAINS InterPro DOMAIN/s: Transposase, MuDR, plant
(InterPro:IPR004332); BEST Arabidopsis thaliana protein
match is: SWAP (Suppressor-of-White-APricot)/surp
RNA-binding domain-containing protein (TAIR:AT1G18050.1);
Has 35 Blast hits to 35 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.34 -0.3
22 AT2G34980 phosphatidylinositolglycan synthase family protein SETH1 0.6 0.3 -0.31
23 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 -0.6 0.31 -0.34
24 AT5G39370 Curculin-like (mannose-binding) lectin family protein -0.6 0.32 -0.34
25 AT1G02490 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.6 0.29 -0.34
26 AT2G29220 Concanavalin A-like lectin protein kinase family protein 0.6 0.32 -0.31
27 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-3, OEP16-3 -0.6 0.33 -0.33
28 AT3G30660 transposable element gene 0.6 0.31 -0.33
29 AT1G12775 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.32 -0.31
30 AT2G31780 RING/U-box superfamily protein ARIADNE 11, ARABIDOPSIS ARIADNE 11 0.59 0.3 -0.29
31 AT3G60020 SKP1-like 5 SKP1-like 5, SKP1-like 5 -0.59 0.34 -0.3
32 AT3G42820 transposable element gene 0.59 0.32 -0.31
33 AT4G07450 transposable element gene -0.59 0.29 -0.32
34 AT1G64830 Eukaryotic aspartyl protease family protein 0.59 0.33 -0.34
35 AT1G05770 Mannose-binding lectin superfamily protein -0.59 0.3 -0.31
36 AT1G27385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF493 (InterPro:IPR007454);
Has 76 Blast hits to 76 proteins in 23 species: Archae - 0;
Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.59 0.33 -0.3
37 AT2G27750 Surfeit locus protein 6 0.58 0.32 -0.32
38 AT1G64320 myosin heavy chain-related 0.58 0.32 -0.33
39 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING -0.58 0.32 -0.32
40 AT2G42870 phy rapidly regulated 1 HELIX-LOOP-HELIX 1, PHY RAPIDLY
REGULATED 1		 -0.58 0.33 -0.32
41 AT4G26930 myb domain protein 97 myb domain protein 97, myb domain
protein 97		 -0.58 0.32 -0.29
42 AT2G22750 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.58 0.3 -0.29
43 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 -0.58 0.31 -0.3
44 AT3G21590 Senescence/dehydration-associated protein-related -0.57 0.31 -0.32
45 AT2G03190 SKP1-like 16 SKP1-like 16, SKP1-like 16 0.57 0.3 -0.32
46 AT4G15200 formin 3 formin 3, formin 3 -0.57 0.3 -0.3
47 ATMG00050 hypothetical protein ORF131 -0.57 0.31 -0.31
48 ATMG00670 hypothetical protein ORF275 0.57 0.33 -0.3
49 AT1G11250 syntaxin of plants 125 ATSYP125, syntaxin of plants 125 -0.57 0.32 -0.31
50 AT5G22380 NAC domain containing protein 90 NAC domain containing protein 90,
NAC domain containing protein 90		 0.57 0.3 -0.31
51 AT3G10880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G05180.1); Has 15699 Blast
hits to 11378 proteins in 1134 species: Archae - 391;
Bacteria - 2054; Metazoa - 6851; Fungi - 1354; Plants -
1096; Viruses - 119; Other Eukaryotes - 3834 (source: NCBI
BLink).		 -0.57 0.33 -0.34
52 AT5G16650 Chaperone DnaJ-domain superfamily protein -0.56 0.34 -0.3
53 AT2G18850 SET domain-containing protein -0.56 0.31 -0.32
54 AT1G22275 Myosin heavy chain-related protein ZYP1, ZYP1b 0.56 0.32 -0.3
55 AT4G22310 Uncharacterised protein family (UPF0041) -0.56 0.33 -0.33
56 AT5G49140 Disease resistance protein (TIR-NBS-LRR class) family -0.56 0.33 -0.28
57 AT5G64470 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 12 -0.56 0.31 -0.33
58 AT3G20970 NFU domain protein 4 ARABIDOPSIS THALIANA NFU DOMAIN
PROTEIN 2, NFU domain protein 4		 -0.56 0.32 -0.31
59 AT5G28550 BEST Arabidopsis thaliana protein match is: homolog of
separase (TAIR:AT4G22970.2); Has 25 Blast hits to 25
proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.31 -0.33
60 AT1G61700 RNA polymerases N / 8 kDa subunit -0.56 0.29 -0.32
61 AT3G44140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: sperm cell, male
gametophyte, pollen tube; EXPRESSED DURING: M germinated
pollen stage; Has 1 Blast hits to 1 proteins in 1 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.32 -0.33
62 AT5G44300 Dormancy/auxin associated family protein -0.55 0.31 -0.32
63 AT5G18870 Inosine-uridine preferring nucleoside hydrolase family
protein		 nucleoside hydrolase 5 -0.55 0.31 -0.32
64 AT3G50720 Protein kinase superfamily protein -0.55 0.3 -0.33
65 AT1G06510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; Has 376 Blast hits to 369
proteins in 152 species: Archae - 5; Bacteria - 113;
Metazoa - 105; Fungi - 46; Plants - 27; Viruses - 2; Other
Eukaryotes - 78 (source: NCBI BLink).		 -0.55 0.33 -0.33
66 AT3G09140 Protein of unknown function (DUF674) -0.55 0.32 -0.34
67 AT4G09110 RING/U-box superfamily protein 0.55 0.29 -0.32
68 AT5G44760 C2 domain-containing protein -0.55 0.32 -0.32
69 AT3G30190 transposable element gene 0.55 0.32 -0.32
70 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 0.55 0.3 -0.31
71 AT3G08890 Protein of unknown function, DUF538 -0.55 0.32 -0.31
72 AT1G13540 Protein of unknown function (DUF1262) -0.55 0.32 -0.31
73 AT2G26850 F-box family protein -0.55 0.33 -0.33
74 AT5G34460 transposable element gene -0.54 0.31 -0.31
75 AT5G51420 long-chain-alcohol O-fatty-acyltransferase family protein /
wax synthase family protein		 0.54 0.32 -0.32
76 AT4G33350 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-IV,
translocon at the inner envelope
membrane of chloroplasts 22-IV		 -0.54 0.3 -0.3
77 AT3G48830 polynucleotide adenylyltransferase family protein / RNA
recognition motif (RRM)-containing protein		 0.54 0.32 -0.32
78 AT1G21780 BTB/POZ domain-containing protein -0.54 0.31 -0.32
79 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).		 -0.54 0.32 -0.33
80 AT1G34000 one-helix protein 2 one-helix protein 2 -0.54 0.3 -0.35
81 AT4G17483 alpha/beta-Hydrolases superfamily protein -0.54 0.31 -0.32
82 AT4G23960 F-box family protein 0.54 0.33 -0.29
83 AT4G00770 unknown protein; Has 127 Blast hits to 120 proteins in 33
species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8;
Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source:
NCBI BLink).		 -0.54 0.3 -0.31
84 AT4G38590 beta-galactosidase 14 beta-galactosidase 14 0.53 0.34 -0.34
85 AT2G39100 RING/U-box superfamily protein -0.53 0.32 -0.32
86 AT2G39080 NAD(P)-binding Rossmann-fold superfamily protein EMBRYO DEFECTIVE 2799 -0.53 0.3 -0.31
87 AT1G79990 structural molecules -0.53 0.33 -0.33
88 AT1G67670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24405.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.53 0.33 -0.32
89 AT4G15710 unknown protein; Has 18 Blast hits to 18 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.32 -0.31
90 AT3G60410 Protein of unknown function (DUF1639) -0.53 0.33 -0.3
91 AT3G54130 Josephin family protein -0.53 0.32 -0.31
92 AT4G15320 cellulose synthase-like B6 cellulose synthase-like B6,
CELLULOSE SYNTHASE LIKE B6,
CSLB06, cellulose synthase-like B6		 -0.53 0.31 -0.31
93 AT5G25990 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: Core-2/I-branching
beta-1,6-N-acetylglucosaminyltransferase family protein
(TAIR:AT5G25970.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.53 0.3 -0.3
94 AT3G10990 F-box associated ubiquitination effector family protein -0.53 0.32 -0.3
95 AT3G43790 zinc induced facilitator-like 2 zinc induced facilitator-like 2 -0.53 0.32 -0.32
96 AT5G03980 SGNH hydrolase-type esterase superfamily protein -0.53 0.34 -0.3
97 AT2G35570 pseudogene, serpin (serine protease inhibitor) family,
similar to phloem serpin-1 (Cucurbita maxima) GI:9937311;
blastp match of 49% identity and 9.9e-85 P-value to
GP|26224736|gb|AAN76362.1||AY158152 serpin-like protein
{Citrus x paradisi}		 -0.53 0.32 -0.3
98 AT5G23960 terpene synthase 21 ATTPS21, terpene synthase 21 -0.53 0.32 -0.3
99 AT2G06090 Plant self-incompatibility protein S1 family -0.53 0.33 -0.31
100 AT1G17010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.52 0.32 -0.31
101 AT1G42960 expressed protein localized to the inner membrane of the
chloroplast.		 -0.52 0.3 -0.31
102 AT4G27090 Ribosomal protein L14 -0.52 0.33 -0.3
103 AT4G11340 Disease resistance protein (TIR-NBS-LRR class) family 0.52 0.3 -0.3
104 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 -0.52 0.32 -0.32
105 AT2G19300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.32 -0.32
106 AT5G16420 Pentatricopeptide repeat (PPR-like) superfamily protein -0.52 0.31 -0.31
107 AT5G17530 phosphoglucosamine mutase family protein -0.52 0.31 -0.31
108 AT5G10460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.52 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
109 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		0.73 0.44 -0.48 C0105
110 C0187 Neoeriocitrin - - - 0.6 0.44 -0.45