AT1G42960 : -
Query Information
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AGICode AT1G42960
Description expressed protein localized to the inner membrane of the chloroplast.
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G42960 expressed protein localized to the inner membrane of the
chloroplast.		 1 0.31 -0.33
2 AT5G06580 FAD-linked oxidases family protein 0.71 0.29 -0.31
3 AT4G14910 HISTIDINE BIOSYNTHESIS 5B HISTIDINE BIOSYNTHESIS 5B 0.68 0.31 -0.32
4 AT1G65410 non-intrinsic ABC protein 11 ATP-binding cassette I13,
non-intrinsic ABC protein 11,
non-intrinsic ABC protein 11,
TRIGALACTOSYLDIACYLGLYCEROL 3		 0.67 0.31 -0.32
5 AT5G36210 alpha/beta-Hydrolases superfamily protein 0.66 0.32 -0.3
6 AT4G21860 methionine sulfoxide reductase B 2 methionine sulfoxide reductase B 2 0.66 0.33 -0.3
7 AT5G17530 phosphoglucosamine mutase family protein 0.66 0.32 -0.31
8 AT1G54520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1517 (InterPro:IPR010903);
Has 276 Blast hits to 275 proteins in 83 species: Archae -
0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113;
Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).		 0.65 0.31 -0.32
9 AT1G33280 NAC domain containing protein 15 NAC domain containing protein 15,
BEARSKIN 1, NAC domain containing
protein 15		 -0.65 0.33 -0.31
10 AT5G55650 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.64 0.32 -0.3
11 AT2G10950 BSD domain-containing protein 0.64 0.31 -0.32
12 AT1G71740 unknown protein; Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.3 -0.33
13 AT5G52170 homeodomain GLABROUS 7 homeodomain GLABROUS 7 -0.63 0.31 -0.33
14 AT2G31900 myosin-like protein XIF MYOSIN 5, MYOSIN XI F, myosin-like
protein XIF		 -0.63 0.32 -0.31
15 AT5G17960 Cysteine/Histidine-rich C1 domain family protein -0.63 0.32 -0.31
16 AT2G46340 SPA (suppressor of phyA-105) protein family SUPPRESSOR OF PHYA-105 1 0.62 0.29 -0.32
17 AT5G59610 Chaperone DnaJ-domain superfamily protein 0.62 0.32 -0.31
18 AT4G36910 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 1,
CYSTATHIONE [BETA]-SYNTHASE
DOMAIN-CONTAINING PROTEIN 2, LOSS
OF THE TIMING OF ET AND JA
BIOSYNTHESIS 2		 0.62 0.28 -0.32
19 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751		 0.61 0.3 -0.31
20 AT3G49760 basic leucine-zipper 5 basic leucine-zipper 5, basic
leucine-zipper 5		 -0.61 0.32 -0.33
21 AT4G14390 Ankyrin repeat family protein -0.61 0.32 -0.33
22 AT1G19320 Pathogenesis-related thaumatin superfamily protein 0.61 0.3 -0.31
23 AT4G28650 Leucine-rich repeat transmembrane protein kinase family
protein		 -0.61 0.31 -0.29
24 AT2G05830 NagB/RpiA/CoA transferase-like superfamily protein 0.6 0.31 -0.32
25 AT2G22920 serine carboxypeptidase-like 12 serine carboxypeptidase-like 12 -0.6 0.29 -0.31
26 AT3G45560 zinc finger (C3HC4-type RING finger) family protein 0.59 0.31 -0.31
27 AT2G15110 Protein of unknown function, DUF601 0.59 0.31 -0.32
28 AT2G27370 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 3		 -0.59 0.3 -0.34
29 AT2G32040 Major facilitator superfamily protein 0.58 0.29 -0.31
30 AT5G18870 Inosine-uridine preferring nucleoside hydrolase family
protein		 nucleoside hydrolase 5 0.58 0.33 -0.32
31 AT4G24500 hydroxyproline-rich glycoprotein family protein 0.58 0.3 -0.31
32 AT2G33790 arabinogalactan protein 30 arabinogalactan protein 30,
ATAGP30		 -0.58 0.32 -0.33
33 AT3G46350 Leucine-rich repeat protein kinase family protein 0.58 0.32 -0.31
34 AT5G27680 RECQ helicase SIM RECQ helicase SIM -0.58 0.31 -0.32
35 AT5G51520 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.58 0.29 -0.33
36 AT4G18470 negative regulator of systemic acquired resistance (SNI1) SUPPRESSOR OF NPR1-1, INDUCIBLE 1 -0.57 0.33 -0.31
37 AT5G49270 COBRA-like extracellular glycosyl-phosphatidyl
inositol-anchored protein family		 COBRA-LIKE 9, DEFORMED ROOT HAIRS
9, MUTANT ROOT HAIR 4, SHAVEN 2		 -0.57 0.33 -0.33
38 AT4G30970 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.31 -0.3
39 AT3G50720 Protein kinase superfamily protein 0.56 0.32 -0.32
40 AT3G62440 F-box/RNI-like superfamily protein secondary wall
thickening-associated F-box 1		 -0.56 0.31 -0.32
41 AT2G14640 transposable element gene 0.56 0.31 -0.32
42 AT1G18910 zinc ion binding;zinc ion binding -0.56 0.3 -0.32
43 AT5G40250 RING/U-box superfamily protein -0.55 0.31 -0.31
44 AT1G64830 Eukaryotic aspartyl protease family protein -0.55 0.33 -0.35
45 AT2G44530 Phosphoribosyltransferase family protein 0.55 0.33 -0.29
46 AT3G24810 Cyclin-dependent kinase inhibitor family protein ICK3, kip-related protein 5 -0.55 0.33 -0.29
47 AT3G29635 HXXXD-type acyl-transferase family protein -0.55 0.32 -0.31
48 AT1G79050 recA DNA recombination family protein 0.55 0.33 -0.31
49 AT5G57740 XB3 ortholog 2 in Arabidopsis thaliana XB3 ortholog 2 in Arabidopsis
thaliana		 -0.55 0.3 -0.3
50 AT2G01950 BRI1-like 2 BRI1-like 2, VASCULAR HIGHWAY 1 -0.54 0.32 -0.31
51 AT1G31270 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.54 0.34 -0.33
52 AT1G69180 Plant-specific transcription factor YABBY family protein CRABS CLAW -0.53 0.32 -0.31
53 AT1G50080 BEST Arabidopsis thaliana protein match is: RNA-directed
DNA polymerase (reverse transcriptase)-related family
protein (TAIR:AT1G60720.1); Has 42 Blast hits to 42
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.53 0.32 -0.32
54 AT3G13020 hAT transposon superfamily protein -0.53 0.31 -0.32
55 AT4G05170 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.53 0.32 -0.31
56 AT2G17070 Arabidopsis protein of unknown function (DUF241) -0.52 0.31 -0.32
57 AT3G50620 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.52 0.3 -0.31
58 AT3G62610 myb domain protein 11 myb domain protein 11, myb domain
protein 11, PRODUCTION OF FLAVONOL
GLYCOSIDES 2		 -0.52 0.33 -0.32
59 AT4G01140 Protein of unknown function (DUF1191) -0.52 0.32 -0.34
60 AT4G22020 pseudogene, hypothetical protein, similar to
uncharacterized glycine-rich protein (GI:7269047)
{Arabidopsis thaliana}		 -0.52 0.31 -0.31
61 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.52 0.33 -0.31