AT1G56380 : -
Query Information
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AGICode AT1G56380
Description Mitochondrial transcription termination factor family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G56380 Mitochondrial transcription termination factor family
protein		 1 0.32 -0.32
2 AT5G37640 ubiquitin 9 ubiquitin 9 -0.74 0.31 -0.31
3 AT1G42365 transposable element gene 0.73 0.32 -0.33
4 AT4G30590 early nodulin-like protein 12 AtENODL12, early nodulin-like
protein 12		 0.72 0.34 -0.34
5 AT5G15380 domains rearranged methylase 1 domains rearranged methylase 1 0.72 0.33 -0.31
6 AT1G35995 transposable element gene -0.69 0.29 -0.31
7 AT1G63070 pentatricopeptide (PPR) repeat-containing protein -0.69 0.31 -0.33
8 AT1G11780 oxidoreductase, 2OG-Fe(II) oxygenase family protein 0.69 0.31 -0.31
9 AT3G30570 transposable element gene 0.68 0.32 -0.32
10 AT5G51480 SKU5 similar 2 SKU5 similar 2 -0.66 0.3 -0.32
11 AT3G14070 cation exchanger 9 CATION CALCIUM EXCHANGER 3, cation
exchanger 9, CATION CALCIUM
EXCHANGER 3		 -0.66 0.32 -0.3
12 AT1G02320 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.66 0.32 -0.31
13 AT2G16010 transposable element gene -0.65 0.32 -0.33
14 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 -0.65 0.3 -0.31
15 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 0.65 0.32 -0.31
16 AT1G29220 transcriptional regulator family protein 0.65 0.32 -0.31
17 AT2G19420 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.3 -0.31
18 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 -0.65 0.32 -0.31
19 AT4G15955 alpha/beta-Hydrolases superfamily protein -0.65 0.31 -0.31
20 AT1G09980 Putative serine esterase family protein -0.64 0.3 -0.3
21 AT2G34180 CBL-interacting protein kinase 13 WPL4-LIKE 2, CBL-interacting
protein kinase 13, SNF1-RELATED
PROTEIN KINASE 3.7, WPL4-LIKE 2		 -0.64 0.34 -0.3
22 AT1G34590 transposable element gene 0.64 0.31 -0.32
23 AT2G04820 transposable element gene 0.64 0.3 -0.31
24 AT5G53070 Ribosomal protein L9/RNase H1 0.64 0.31 -0.35
25 AT2G40440 BTB/POZ domain-containing protein 0.63 0.31 -0.31
26 AT2G04730 pseudogene, F-box protein-related, contains TIGRFAM
TIGR01640 : F-box protein interaction domain; similar to
F-box protein family, AtFBX9 (GI:20197985) (Arabidopsis
thaliana)		 0.63 0.32 -0.3
27 AT2G44810 alpha/beta-Hydrolases superfamily protein DEFECTIVE ANTHER DEHISCENCE 1 0.63 0.33 -0.31
28 AT1G23070 Protein of unknown function (DUF300) -0.63 0.29 -0.33
29 AT2G12230 pseudogene, C-1-tetrahydrofolate synthase, blastp match of
91% identity and 2.9e-07 P-value to
GP|9843502|emb|CAC03667.1||AL133260 dJ292B18.2 (novel
protein similar to methylenetetrahydrofolate dehydrogenase
(NADP+ dependent), methenyltetrahydrofolate cyclohydrolase,
formyltetrahydrofolate synthetase (MTHFD1) (EC 1.5.1.5, EC
3.5.4.9, EC-TRUNCATED-		 0.63 0.3 -0.32
30 AT2G37320 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.31 -0.29
31 AT3G44600 cyclophilin71 AtCYP71, cyclophilin 71 0.62 0.32 -0.29
32 AT2G19070 spermidine hydroxycinnamoyl transferase spermidine hydroxycinnamoyl
transferase		 0.62 0.3 -0.32
33 AT3G27930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 35
Blast hits to 35 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.3 -0.3
34 AT4G33440 Pectin lyase-like superfamily protein 0.62 0.3 -0.31
35 AT1G58410 Disease resistance protein (CC-NBS-LRR class) family 0.62 0.3 -0.27
36 AT5G46440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
Pentatricopeptide repeat (PPR) superfamily protein
(TAIR:AT5G46460.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.62 0.32 -0.31
37 AT1G39430 transposable element gene 0.62 0.31 -0.32
38 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 -0.61 0.3 -0.34
39 AT5G18910 Protein kinase superfamily protein 0.61 0.31 -0.29
40 AT5G54260 DNA repair and meiosis protein (Mre11) ARABIDOPSIS MEIOTIC RECOMBINATION
11, MEIOTIC RECOMBINATION 11		 0.61 0.3 -0.33
41 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 0.61 0.29 -0.31
42 AT1G32050 SCAMP family protein 0.6 0.33 -0.3
43 AT2G12880 Zinc knuckle (CCHC-type) family protein -0.6 0.32 -0.32
44 AT3G02280 Flavodoxin family protein 0.6 0.3 -0.31
45 AT4G26890 mitogen-activated protein kinase kinase kinase 16 mitogen-activated protein kinase
kinase kinase 16		 -0.6 0.3 -0.3
46 AT4G07640 transposable element gene 0.6 0.36 -0.31
47 AT2G10920 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.34 -0.33
48 AT2G26630 transposable element gene 0.59 0.32 -0.31
49 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 -0.59 0.33 -0.3
50 AT3G07860 Ubiquitin-like superfamily protein 0.59 0.35 -0.33
51 AT1G63560 Receptor-like protein kinase-related family protein 0.59 0.31 -0.33
52 AT4G03600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.3 -0.31
53 AT3G20900 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.32 -0.31
54 AT2G21950 SKP1 interacting partner 6 SKP1 interacting partner 6 -0.59 0.3 -0.34
55 AT3G04250 F-box associated ubiquitination effector family protein 0.59 0.33 -0.3
56 AT5G03260 laccase 11 laccase 11 -0.59 0.34 -0.3
57 AT1G26610 C2H2-like zinc finger protein 0.59 0.33 -0.31
58 AT3G62890 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.31 -0.31
59 AT1G64480 calcineurin B-like protein 8 calcineurin B-like protein 8 0.59 0.31 -0.33
60 AT2G46480 galacturonosyltransferase 2 galacturonosyltransferase 2,
GALACTURONOSYLTRANSFERASE 2		 0.59 0.3 -0.32
61 AT5G38670 Galactose oxidase/kelch repeat superfamily protein -0.59 0.32 -0.31
62 AT3G07840 Pectin lyase-like superfamily protein 0.59 0.32 -0.31
63 AT3G52090 DNA-directed RNA polymerase, RBP11-like ATRPB13.6, NRPB11, NRPD11, NRPE11 -0.59 0.33 -0.28
64 AT1G73690 cyclin-dependent kinase D1;1 CYCLIN-DEPENDENT KINASE D1,
CAK3AT, cyclin-dependent kinase
D1;1		 -0.59 0.29 -0.3
65 AT2G06840 transposable element gene -0.58 0.29 -0.3
66 AT4G04300 transposable element gene -0.58 0.3 -0.34
67 AT4G05140 Nucleoside transporter family protein -0.58 0.32 -0.3
68 AT2G37800 Cysteine/Histidine-rich C1 domain family protein -0.58 0.31 -0.33
69 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 -0.58 0.32 -0.31
70 AT5G13600 Phototropic-responsive NPH3 family protein 0.58 0.34 -0.32
71 AT5G59845 Gibberellin-regulated family protein -0.58 0.34 -0.33
72 AT5G22680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is:
F-box/RNI-like superfamily protein (TAIR:AT5G22720.2); Has
65 Blast hits to 64 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.28 -0.31
73 AT1G28375 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.57 0.31 -0.32
74 AT5G43530 Helicase protein with RING/U-box domain -0.57 0.3 -0.31
75 AT3G14880 BEST Arabidopsis thaliana protein match is: transcription
factor-related (TAIR:AT4G18650.1); Has 560 Blast hits to
560 proteins in 40 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 558; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.31 -0.3
76 AT4G07380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.57 0.31 -0.32
77 AT1G48620 high mobility group A5 high mobility group A5 -0.57 0.33 -0.32
78 AT4G19350 embryo defective 3006 embryo defective 3006 0.57 0.33 -0.31
79 AT1G51990 O-methyltransferase family protein 0.57 0.33 -0.31
80 AT2G11220 transposable element gene -0.57 0.32 -0.32
81 AT1G15720 TRF-like 5 TRF-like 5 -0.56 0.3 -0.31
82 AT5G66430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.56 0.3 -0.32
83 AT5G56830 transposable element gene -0.55 0.31 -0.32
84 AT1G21230 wall associated kinase 5 wall associated kinase 5 -0.55 0.31 -0.31
85 AT5G49790 transposable element gene -0.54 0.32 -0.28
86 AT3G47440 tonoplast intrinsic protein 5;1 tonoplast intrinsic protein 5;1 -0.54 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
87 C0172 MST_2214.3 - - - -0.7 0.44 -0.45
88 C0198 Phosphatidylethanolamine-34:0 - - - 0.69 0.47 -0.49