AT1G52360 : -
Query Information
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AGICode AT1G52360
Description Coatomer, beta' subunit
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G52360 Coatomer, beta' subunit 1 0.33 -0.3
2 AT1G17690 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Digestive organ
expansion factor, predicted (InterPro:IPR010678); Has 25006
Blast hits to 13379 proteins in 904 species: Archae - 102;
Bacteria - 5571; Metazoa - 7448; Fungi - 3168; Plants -
1056; Viruses - 466; Other Eukaryotes - 7195 (source: NCBI
BLink).		 nucleolar factor 1 0.82 0.32 -0.3
3 AT2G46800 zinc transporter of Arabidopsis thaliana A. THALIANA CATION DIFFUSION
FACILITATOR 1, ATMTP1, MTP1, zinc
transporter of Arabidopsis
thaliana, ZINC TRANSPORTER OF
ARABIDOPSIS THALIANA 1		 -0.81 0.31 -0.31
4 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 -0.77 0.31 -0.32
5 AT5G57450 homolog of X-ray repair cross complementing 3 (XRCC3) ARABIDOPSIS THALIANA HOMOLOG OF
X-RAY REPAIR CROSS COMPLEMENTING 3
(XRCC3), homolog of X-ray repair
cross complementing 3 (XRCC3)		 0.76 0.31 -0.3
6 AT3G02480 Late embryogenesis abundant protein (LEA) family protein -0.75 0.3 -0.32
7 AT1G72760 Protein kinase superfamily protein -0.74 0.3 -0.3
8 AT3G50980 dehydrin xero 1 dehydrin xero 1 -0.73 0.32 -0.3
9 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein -0.73 0.31 -0.3
10 AT1G06470 Nucleotide/sugar transporter family protein 0.73 0.32 -0.33
11 AT4G14270 Protein containing PAM2 motif which mediates interaction
with the PABC domain of polyadenyl binding proteins.		 -0.73 0.31 -0.32
12 AT1G11270 F-box and associated interaction domains-containing protein -0.72 0.31 -0.32
13 AT1G69260 ABI five binding protein ABI five binding protein -0.72 0.31 -0.32
14 AT4G16990 disease resistance protein (TIR-NBS class), putative RESISTANCE TO LEPTOSPHAERIA
MACULANS 3		 0.72 0.33 -0.34
15 AT2G35390 Phosphoribosyltransferase family protein 0.72 0.32 -0.3
16 AT5G47455 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED
DURING: 8 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast
hits to 147 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.3 -0.3
17 AT5G65450 ubiquitin-specific protease 17 ubiquitin-specific protease 17 0.71 0.3 -0.31
18 AT1G64440 NAD(P)-binding Rossmann-fold superfamily protein ROOT EPIDERMAL BULGER1, ROOT HAIR
DEFECTIVE 1, UDP-GLUCOSE
4-EPIMERASE		 0.71 0.3 -0.33
19 AT2G31740 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.71 0.31 -0.3
20 AT5G23480 SWIB/MDM2 domain;Plus-3;GYF 0.71 0.32 -0.31
21 AT4G31830 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.71 0.33 -0.32
22 AT1G35320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30160.1); Has 9 Blast hits to
9 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.7 0.33 -0.29
23 AT3G23660 Sec23/Sec24 protein transport family protein 0.7 0.31 -0.32
24 AT1G50630 Protein of unknown function (DUF3537) -0.7 0.32 -0.3
25 AT1G06630 F-box/RNI-like superfamily protein -0.7 0.33 -0.34
26 AT2G04730 pseudogene, F-box protein-related, contains TIGRFAM
TIGR01640 : F-box protein interaction domain; similar to
F-box protein family, AtFBX9 (GI:20197985) (Arabidopsis
thaliana)		 0.7 0.33 -0.3
27 AT3G19290 ABRE binding factor 4 ABRE binding factor 4,
ABA-RESPONSIVE ELEMENT BINDING
PROTEIN 2		 -0.7 0.33 -0.34
28 AT1G22890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 11 growth stages; Has 17 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.69 0.31 -0.35
29 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.32 -0.31
30 AT3G06040 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 0.69 0.3 -0.29
31 AT1G28330 dormancy-associated protein-like 1 DORMANCY-ASSOCIATED PROTEIN 1,
dormancy-associated protein-like 1		 -0.69 0.32 -0.33
32 AT1G51270 structural molecules;transmembrane receptors;structural
molecules		 0.69 0.32 -0.31
33 AT5G12470 Protein of unknown function (DUF3411) 0.69 0.31 -0.3
34 AT1G18070 Translation elongation factor EF1A/initiation factor
IF2gamma family protein		 0.69 0.31 -0.32
35 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 0.68 0.31 -0.35
36 AT4G37220 Cold acclimation protein WCOR413 family -0.68 0.33 -0.31
37 AT3G10020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 47 Blast hits to 47 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.35 -0.32
38 AT2G29380 highly ABA-induced PP2C gene 3 highly ABA-induced PP2C gene 3 -0.68 0.3 -0.33
39 AT1G42365 transposable element gene 0.68 0.33 -0.32
40 AT1G68980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.32 -0.32
41 AT4G15200 formin 3 formin 3, formin 3 0.68 0.31 -0.32
42 AT1G78450 SOUL heme-binding family protein 0.67 0.32 -0.33
43 AT5G65970 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 10,
MILDEW RESISTANCE LOCUS O 10		 0.67 0.32 -0.29
44 AT1G11190 bifunctional nuclease i bifunctional nuclease i,
ENDONUCLEASE 1		 -0.67 0.31 -0.32
45 AT3G03150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G17165.1); Has 39 Blast
hits to 39 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.32 -0.33
46 AT3G46820 type one serine/threonine protein phosphatase 5 type one serine/threonine protein
phosphatase 5		 0.67 0.31 -0.29
47 AT3G04600 Nucleotidylyl transferase superfamily protein 0.67 0.31 -0.33
48 AT1G68650 Uncharacterized protein family (UPF0016) 0.67 0.32 -0.31
49 AT5G51210 oleosin3 oleosin3 -0.67 0.3 -0.28
50 AT1G22990 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 22		 -0.66 0.3 -0.33
51 AT5G50230 Transducin/WD40 repeat-like superfamily protein -0.66 0.34 -0.33
52 AT4G35370 Transducin/WD40 repeat-like superfamily protein 0.66 0.32 -0.3
53 AT2G37160 Transducin/WD40 repeat-like superfamily protein 0.66 0.33 -0.32
54 AT1G23280 MAK16 protein-related 0.66 0.32 -0.32
55 AT2G27660 Cysteine/Histidine-rich C1 domain family protein 0.66 0.31 -0.32
56 AT5G48290 Heavy metal transport/detoxification superfamily protein 0.66 0.33 -0.32
57 AT2G37510 RNA-binding (RRM/RBD/RNP motifs) family protein 0.66 0.3 -0.3
58 AT1G16940 F-box/RNI-like/FBD-like domains-containing protein 0.66 0.33 -0.3
59 AT3G59630 diphthamide synthesis DPH2 family protein 0.66 0.32 -0.3
60 AT5G16120 alpha/beta-Hydrolases superfamily protein -0.66 0.3 -0.33
61 AT5G60680 Protein of unknown function, DUF584 -0.66 0.32 -0.32
62 AT2G15420 myosin heavy chain-related 0.66 0.3 -0.33
63 AT2G15890 maternal effect embryo arrest 14 maternal effect embryo arrest 14 -0.66 0.32 -0.33
64 AT5G38820 Transmembrane amino acid transporter family protein 0.66 0.32 -0.31
65 AT1G08630 threonine aldolase 1 threonine aldolase 1 -0.66 0.31 -0.32
66 AT4G39350 cellulose synthase A2 ATCESA2, ATH-A, cellulose synthase
A2		 0.66 0.3 -0.31
67 AT3G05260 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.3 -0.31
68 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 0.65 0.34 -0.34
69 AT1G68990 male gametophyte defective 3 male gametophyte defective 3 0.65 0.32 -0.3
70 AT1G51270 structural molecules;transmembrane receptors;structural
molecules		 0.65 0.32 -0.3
71 AT3G54390 sequence-specific DNA binding transcription factors -0.65 0.34 -0.32
72 AT5G14760 L-aspartate oxidase L-aspartate oxidase 0.65 0.32 -0.29
73 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein -0.65 0.3 -0.31
74 AT4G18420 transposable element gene 0.65 0.31 -0.31
75 AT4G25140 oleosin 1 OLEOSIN 1, oleosin 1 -0.65 0.32 -0.31
76 AT1G58210 kinase interacting family protein EMBRYO DEFECTIVE 1674 0.65 0.32 -0.31
77 AT1G65090 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G36100.1); Has 1435 Blast hits
to 1033 proteins in 192 species: Archae - 0; Bacteria - 61;
Metazoa - 511; Fungi - 123; Plants - 100; Viruses - 42;
Other Eukaryotes - 598 (source: NCBI BLink).		 -0.65 0.31 -0.3
78 AT3G42100 transposable element gene 0.64 0.29 -0.31
79 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 -0.64 0.33 -0.31
80 AT5G43010 regulatory particle triple-A ATPase 4A regulatory particle triple-A
ATPase 4A		 0.64 0.32 -0.31
81 AT3G27420 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits
to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.64 0.32 -0.3
82 AT4G16970 Protein kinase superfamily protein 0.64 0.32 -0.32
83 AT1G03170 Protein of unknown function (DUF3049) FANTASTIC FOUR 2 0.64 0.31 -0.33
84 AT3G49000 RNA polymerase III subunit RPC82 family protein 0.64 0.33 -0.31
85 AT5G57690 diacylglycerol kinase 4 ATDGK4, diacylglycerol kinase 4 0.64 0.34 -0.28
86 AT5G60910 AGAMOUS-like 8 AGAMOUS-like 8, FRUITFULL -0.64 0.34 -0.31
87 AT4G09630 Protein of unknown function (DUF616) 0.64 0.3 -0.28
88 AT2G32510 mitogen-activated protein kinase kinase kinase 17 mitogen-activated protein kinase
kinase kinase 17		 -0.64 0.34 -0.31
89 AT3G49400 Transducin/WD40 repeat-like superfamily protein 0.63 0.3 -0.31
90 AT3G47160 RING/U-box superfamily protein -0.63 0.33 -0.3
91 AT1G53940 GDSL-motif lipase 2 GDSL-motif lipase 2 0.63 0.29 -0.32
92 AT5G50500 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.63 0.33 -0.31
93 AT3G14595 Ribosomal protein L18ae family -0.63 0.31 -0.31
94 AT2G10010 transposable element gene 0.63 0.34 -0.32
95 AT2G33520 unknown protein; Has 68 Blast hits to 68 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.33 -0.31
96 AT1G09020 homolog of yeast sucrose nonfermenting 4 ATSNF4, homolog of yeast sucrose
nonfermenting 4		 0.63 0.34 -0.32
97 AT1G26800 RING/U-box superfamily protein -0.63 0.31 -0.32
98 AT2G19340 Oligosaccharyltransferase complex/magnesium transporter
family protein		 -0.63 0.32 -0.31
99 AT4G00940 Dof-type zinc finger DNA-binding family protein -0.63 0.32 -0.33
100 AT3G09880 Protein phosphatase 2A regulatory B subunit family protein ATB' BETA 0.63 0.33 -0.32
101 AT2G38420 Pentatricopeptide repeat (PPR) superfamily protein -0.63 0.33 -0.3
102 AT4G07840 transposable element gene 0.63 0.32 -0.31
103 AT1G09520 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Zinc finger, PHD-type, conserved site
(InterPro:IPR019786); BEST Arabidopsis thaliana protein
match is: PHD finger family protein (TAIR:AT3G17460.1); Has
56 Blast hits to 56 proteins in 17 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 46; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 -0.63 0.32 -0.3
104 AT4G11030 AMP-dependent synthetase and ligase family protein -0.63 0.32 -0.34
105 AT1G03610 Protein of unknown function (DUF789) -0.63 0.32 -0.3
106 AT5G23520 smr (Small MutS Related) domain-containing protein 0.62 0.31 -0.31
107 AT1G57570 Mannose-binding lectin superfamily protein 0.62 0.34 -0.31
108 AT5G42320 Zn-dependent exopeptidases superfamily protein 0.62 0.3 -0.34
109 AT5G63770 diacylglycerol kinase 2 diacylglycerol kinase 2,
diacylglycerol kinase 2		 0.62 0.31 -0.33
110 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family -0.62 0.33 -0.33
111 AT1G67100 LOB domain-containing protein 40 LOB domain-containing protein 40 -0.62 0.32 -0.33
112 AT5G24610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.35 -0.3
113 AT5G19380 CRT (chloroquine-resistance transporter)-like transporter 1 CRT (chloroquine-resistance
transporter)-like transporter 1		 0.62 0.29 -0.32
114 AT3G49740 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.32 -0.32
115 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.31 -0.32
116 AT2G24530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.31 -0.33
117 AT1G15720 TRF-like 5 TRF-like 5 -0.62 0.32 -0.32
118 AT5G10860 Cystathionine beta-synthase (CBS) family protein CBS domain containing protein 3 -0.62 0.3 -0.32
119 AT5G64110 Peroxidase superfamily protein -0.62 0.32 -0.3
120 AT1G63030 Integrase-type DNA-binding superfamily protein DWARF AND DELAYED FLOWERING 2 -0.62 0.31 -0.32
121 AT1G62960 ACC synthase 10 ACC synthase 10 0.62 0.33 -0.33
122 AT2G31760 RING/U-box superfamily protein ARIADNE 10, ARABIDOPSIS ARIADNE 10 0.62 0.3 -0.31
123 AT4G12930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal, male
gametophyte, flower, pollen tube; EXPRESSED DURING: L
mature pollen stage, M germinated pollen stage, 4 anthesis,
petal differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G28930.1); Has 12 Blast hits to 12 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.33 -0.32
124 AT3G54940 Papain family cysteine protease -0.62 0.34 -0.33
125 AT2G05950 transposable element gene -0.62 0.31 -0.29
126 AT3G01570 Oleosin family protein -0.62 0.31 -0.33
127 AT1G65360 AGAMOUS-like 23 AGAMOUS-like 23 0.62 0.33 -0.33
128 AT1G13880 ELM2 domain-containing protein -0.61 0.33 -0.3
129 AT4G11730 Cation transporter/ E1-E2 ATPase family protein -0.61 0.32 -0.32
130 AT5G55350 MBOAT (membrane bound O-acyl transferase) family protein -0.61 0.32 -0.31
131 AT3G01590 Galactose mutarotase-like superfamily protein -0.61 0.32 -0.3
132 AT2G34440 AGAMOUS-like 29 AGAMOUS-like 29 -0.61 0.3 -0.32
133 AT2G21740 Protein of unknown function (DUF1278) -0.61 0.32 -0.31
134 AT3G21520 DUF679 domain membrane protein 1 Arabidopsis thaliana DUF679 domain
membrane protein 1, DUF679 domain
membrane protein 1		 -0.61 0.32 -0.33
135 AT1G04560 AWPM-19-like family protein -0.61 0.32 -0.32
136 AT5G23080 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 TOUGH -0.61 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
137 C0267 Zeatin cis-Zeatin cis-Zeatin cytokinins-O-glucoside biosynthesis,
cytokinins degradation,
cytokinins 7-N-glucoside biosynthesis,
cytokinins 9-N-glucoside biosynthesis,
cis-zeatin biosynthesis 		-0.65 0.43 -0.45 C0267