AT1G63040 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G63040
Description a pseudogene member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The translated product contains one AP2 domain. There are 17 members in this subfamily including TINY.
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G63040 a pseudogene member of the DREB subfamily A-4 of ERF/AP2
transcription factor family. The translated product
contains one AP2 domain. There are 17 members in this
subfamily including TINY.		 1 0.32 -0.31
2 AT2G04860 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.32 -0.31
3 AT3G20850 proline-rich family protein 0.62 0.31 -0.31
4 AT1G65270 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum, plasma membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages; Has
149 Blast hits to 149 proteins in 49 species: Archae - 0;
Bacteria - 0; Metazoa - 98; Fungi - 0; Plants - 47; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.6 0.32 -0.31
5 AT5G53240 Protein of unknown function (DUF295) 0.6 0.32 -0.32
6 AT4G05340 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.59 0.3 -0.31
7 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 -0.59 0.32 -0.32
8 AT4G33370 DEA(D/H)-box RNA helicase family protein 0.58 0.32 -0.31
9 AT1G55290 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.58 0.32 -0.34
10 AT3G28500 60S acidic ribosomal protein family 0.57 0.33 -0.3
11 AT4G17330 G2484-1 protein G2484-1 protein, G2484-1 protein -0.57 0.35 -0.32
12 AT3G09290 telomerase activator1 telomerase activator1 0.56 0.33 -0.31
13 AT2G25240 Serine protease inhibitor (SERPIN) family protein 0.56 0.33 -0.29
14 AT4G17690 Peroxidase superfamily protein 0.56 0.31 -0.33
15 AT1G55940 cytochrome P450, family 708, subfamily A, polypeptide 1 cytochrome P450, family 708,
subfamily A, polypeptide 1		 -0.56 0.31 -0.31
16 AT1G16360 LEM3 (ligand-effect modulator 3) family protein / CDC50
family protein		 0.56 0.29 -0.32
17 AT1G18350 MAP kinase kinase 7 MAP kinase kinase 7, BUSHY AND
DWARF 1, MAP kinase kinase 7, MAP
KINASE KINASE7		 0.55 0.32 -0.34
18 AT2G27410 Domain of unknown function (DUF313) 0.54 0.32 -0.32
19 AT5G26660 myb domain protein 86 myb domain protein 86, myb domain
protein 86		 0.53 0.3 -0.31
20 AT3G61740 SET domain protein 14 ATX3, SET domain protein 14 -0.53 0.32 -0.31
21 AT2G33880 homeobox-3 homeobox-3, STIMPY,
WUSCHEL-RELATED HOMEOBOX 9,
WUSCHEL related homeobox 9A		 0.53 0.3 -0.34
22 AT5G54410 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.53 0.33 -0.3
23 AT1G52990 thioredoxin family protein -0.53 0.33 -0.32
24 AT2G40910 F-box and associated interaction domains-containing protein 0.52 0.32 -0.34
25 AT5G37840 BEST Arabidopsis thaliana protein match is: plastid
movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.52 0.31 -0.32
26 AT4G36410 ubiquitin-conjugating enzyme 17 ubiquitin-conjugating enzyme 17 0.52 0.32 -0.32
27 AT1G17760 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS THALIANA CLEAVAGE
STIMULATION FACTOR 77, CSTF77		 -0.52 0.33 -0.32
28 AT4G32880 homeobox gene 8 homeobox gene 8, ATHB8, homeobox
gene 8		 -0.52 0.31 -0.32
29 AT4G19510 Disease resistance protein (TIR-NBS-LRR class) 0.52 0.31 -0.31
30 AT4G23960 F-box family protein -0.52 0.31 -0.33
31 AT5G04400 NAC domain containing protein 77 NAC domain containing protein 77,
NAC domain containing protein 77		 0.52 0.31 -0.32
32 AT1G79620 Leucine-rich repeat protein kinase family protein -0.51 0.31 -0.31
33 AT4G21050 Dof-type zinc finger domain-containing protein -0.51 0.32 -0.29
34 AT1G06700 Protein kinase superfamily protein 0.51 0.31 -0.34
35 AT1G77140 vacuolar protein sorting 45 ATVPS45, vacuolar protein sorting
45		 0.5 0.34 -0.29
36 AT3G48560 chlorsulfuron/imidazolinone resistant 1 ACETOHYDROXY ACID SYNTHASE,
ACETOLACTATE SYNTHASE,
chlorsulfuron/imidazolinone
resistant 1, IMIDAZOLE RESISTANT
1, TRIAZOLOPYRIMIDINE RESISTANT 5		 0.5 0.31 -0.3
37 AT2G47860 Phototropic-responsive NPH3 family protein SETH6 -0.5 0.33 -0.33
38 AT1G74310 heat shock protein 101 heat shock protein 101, HOT1, heat
shock protein 101		 -0.49 0.32 -0.31
39 AT5G28930 transposable element gene -0.49 0.32 -0.31
40 AT2G28970 Leucine-rich repeat protein kinase family protein 0.49 0.31 -0.32
41 AT5G27460 Tetratricopeptide repeat (TPR)-like superfamily protein 0.49 0.31 -0.29
42 AT4G04440 transposable element gene 0.49 0.32 -0.29
43 AT5G44630 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.49 0.32 -0.32
44 AT1G51480 Disease resistance protein (CC-NBS-LRR class) family 0.49 0.31 -0.31
45 AT4G09690 Cysteine/Histidine-rich C1 domain family protein -0.47 0.33 -0.29
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
46 C0225 Raffinose D-(+)-Raffinose Raffinose ajugose biosynthesis II (galactinol-independent),
stachyose biosynthesis,
stachyose degradation 		-0.79 0.42 -0.4 C0225
47 C0108 GMP - GMP guanine and guanosine salvage II,
guanosine nucleotides degradation I,
guanosine nucleotides degradation II,
guanine and guanosine salvage III,
purine nucleotides de novo biosynthesis II,
purine nucleotide metabolism (phosphotransfer and nucleotide modification) 		0.62 0.46 -0.46 C0108