AT1G63070 : -
Query Information
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AGICode AT1G63070
Description pentatricopeptide (PPR) repeat-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G63070 pentatricopeptide (PPR) repeat-containing protein 1 0.34 -0.29
2 AT4G10490 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.75 0.31 -0.33
3 AT5G16880 Target of Myb protein 1 0.75 0.32 -0.34
4 AT1G52840 transposable element gene 0.74 0.33 -0.31
5 AT5G49380 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF625 (InterPro:IPR006887); BEST Arabidopsis thaliana
protein match is: binding (TAIR:AT3G06670.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.73 0.32 -0.29
6 AT4G08490 transposable element gene -0.73 0.31 -0.32
7 AT3G30570 transposable element gene -0.73 0.31 -0.32
8 AT3G42320 transposable element gene -0.72 0.3 -0.31
9 AT2G47020 Peptide chain release factor 1 -0.72 0.31 -0.32
10 AT5G23270 sugar transporter 11 SUGAR TRANSPORTER 11, sugar
transporter 11		 0.72 0.32 -0.32
11 AT1G26710 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26720.1); Has 9 Blast hits to
9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.72 0.31 -0.32
12 AT4G26890 mitogen-activated protein kinase kinase kinase 16 mitogen-activated protein kinase
kinase kinase 16		 0.72 0.29 -0.31
13 AT1G17930 Aminotransferase-like, plant mobile domain family protein 0.72 0.3 -0.31
14 AT5G15380 domains rearranged methylase 1 domains rearranged methylase 1 -0.72 0.3 -0.32
15 AT4G19570 Chaperone DnaJ-domain superfamily protein -0.71 0.35 -0.3
16 AT2G28180 Cation/hydrogen exchanger family protein ATCHX8, CHX08, CATION/H+ EXCHANGER
8		 0.71 0.33 -0.3
17 AT1G72290 Kunitz family trypsin and protease inhibitor protein -0.7 0.32 -0.33
18 AT2G40440 BTB/POZ domain-containing protein -0.7 0.3 -0.29
19 AT3G01990 ACT domain repeat 6 ACT domain repeat 6 0.7 0.32 -0.32
20 AT5G29070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion; BEST
Arabidopsis thaliana protein match is: zinc ion
binding;nucleic acid binding (TAIR:AT4G06479.1); Has 5
Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.69 0.31 -0.3
21 AT1G56380 Mitochondrial transcription termination factor family
protein		 -0.69 0.33 -0.32
22 AT2G15880 Leucine-rich repeat (LRR) family protein 0.69 0.31 -0.34
23 AT3G43040 transposable element gene 0.69 0.3 -0.31
24 AT5G52870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G64080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 MEMBRANE-ASSOCIATED KINASE
REGULATOR 5		 0.68 0.32 -0.3
25 AT1G16490 myb domain protein 58 MYB DOMAIN PROTEIN 58, myb domain
protein 58		 0.68 0.34 -0.34
26 AT5G23170 Protein kinase superfamily protein -0.68 0.32 -0.31
27 AT2G02980 Pentatricopeptide repeat (PPR) superfamily protein ORGANELLE TRANSCRIPT PROCESSING 85 -0.68 0.33 -0.33
28 AT1G69470 unknown protein; Has 6 Blast hits to 6 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.68 0.32 -0.32
29 AT5G65910 BSD domain-containing protein 0.67 0.32 -0.3
30 AT3G18040 MAP kinase 9 MAP kinase 9 0.67 0.31 -0.33
31 AT2G34180 CBL-interacting protein kinase 13 WPL4-LIKE 2, CBL-interacting
protein kinase 13, SNF1-RELATED
PROTEIN KINASE 3.7, WPL4-LIKE 2		 0.67 0.32 -0.32
32 AT5G51480 SKU5 similar 2 SKU5 similar 2 0.67 0.32 -0.3
33 AT5G01690 cation/H+ exchanger 27 ARABIDOPSIS THALIANA
CATION/HYDROGEN EXCHANGER 27,
cation/H+ exchanger 27		 0.67 0.31 -0.3
34 AT4G10850 Nodulin MtN3 family protein AtSWEET7, SWEET7 -0.67 0.31 -0.34
35 AT1G11780 oxidoreductase, 2OG-Fe(II) oxygenase family protein -0.66 0.32 -0.34
36 AT2G35530 basic region/leucine zipper transcription factor 16 AtbZIP16, basic region/leucine
zipper transcription factor 16		 0.66 0.32 -0.32
37 AT1G01980 FAD-binding Berberine family protein -0.66 0.29 -0.31
38 AT2G06020 Homeodomain-like superfamily protein 0.66 0.31 -0.32
39 AT1G78710 TRICHOME BIREFRINGENCE-LIKE 42 TRICHOME BIREFRINGENCE-LIKE 42 -0.66 0.31 -0.33
40 AT3G45830 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in
100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi
- 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131
(source: NCBI BLink).		 0.66 0.33 -0.31
41 AT5G03060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11100.2); Has 14506 Blast
hits to 10808 proteins in 1083 species: Archae - 280;
Bacteria - 2737; Metazoa - 4707; Fungi - 940; Plants - 571;
Viruses - 106; Other Eukaryotes - 5165 (source: NCBI
BLink).		 -0.65 0.31 -0.31
42 AT2G15360 BEST Arabidopsis thaliana protein match is:
fucosyltransferase 4 (TAIR:AT2G15390.2); Has 38 Blast hits
to 35 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.31 -0.34
43 AT5G60310 Concanavalin A-like lectin protein kinase family protein -0.65 0.33 -0.31
44 AT5G25430 HCO3- transporter family 0.65 0.33 -0.3
45 AT3G44910 cation/H+ exchanger 12 ATCHX12, cation/H+ exchanger 12 -0.65 0.33 -0.32
46 AT5G65540 unknown protein; Has 6825 Blast hits to 3811 proteins in
289 species: Archae - 0; Bacteria - 184; Metazoa - 2139;
Fungi - 760; Plants - 816; Viruses - 52; Other Eukaryotes -
2874 (source: NCBI BLink).		 0.64 0.3 -0.33
47 AT4G20390 Uncharacterised protein family (UPF0497) -0.64 0.31 -0.31
48 AT1G08170 Histone superfamily protein 0.64 0.33 -0.31
49 AT1G30950 F-box family protein UNUSUAL FLORAL ORGANS -0.64 0.29 -0.33
50 AT2G10630 transposable element gene 0.64 0.3 -0.33
51 AT4G12930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal, male
gametophyte, flower, pollen tube; EXPRESSED DURING: L
mature pollen stage, M germinated pollen stage, 4 anthesis,
petal differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G28930.1); Has 12 Blast hits to 12 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.29 -0.3
52 AT5G65780 branched-chain amino acid aminotransferase 5 /
branched-chain amino acid transaminase 5 (BCAT5)		 ATBCAT-5 0.64 0.29 -0.31
53 AT3G33064 transposable element gene 0.64 0.33 -0.33
54 AT1G17250 receptor like protein 3 receptor like protein 3, receptor
like protein 3		 -0.64 0.3 -0.31
55 AT4G16680 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.33 -0.32
56 AT5G52490 Fibrillarin family protein -0.64 0.31 -0.33
57 AT2G37140 Terpenoid synthases superfamily protein 0.64 0.33 -0.3
58 AT5G27080 Transducin family protein / WD-40 repeat family protein AtCDC20.3, cell division cycle
20.3		 -0.63 0.31 -0.33
59 AT3G15860 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: pollen tube; CONTAINS InterPro
DOMAIN/s: Plant self-incompatibility S1
(InterPro:IPR010264); BEST Arabidopsis thaliana protein
match is: Plant self-incompatibility protein S1 family
(TAIR:AT5G26090.1); Has 19 Blast hits to 16 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.3 -0.31
60 AT3G61940 Cation efflux family protein ATMTPA1, MTPA1 -0.63 0.29 -0.33
61 AT5G24520 Transducin/WD40 repeat-like superfamily protein TRANSPARENT TESTA GLABRA 1, TTG,
TRANSPARENT TESTA GLABRA 1,
UNARMED 23		 0.63 0.3 -0.32
62 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.31 -0.3
63 AT1G15190 Fasciclin-like arabinogalactan family protein -0.63 0.3 -0.31
64 AT3G05540 Methionine sulfoxide reductase (MSS4-like) family protein 0.63 0.32 -0.32
65 AT4G32950 Protein phosphatase 2C family protein 0.63 0.32 -0.31
66 AT1G22130 AGAMOUS-like 104 AGAMOUS-like 104 0.63 0.33 -0.32
67 AT3G30150 transposable element gene -0.63 0.3 -0.34
68 AT1G34530 transposable element gene -0.62 0.32 -0.34
69 AT5G28240 transposable element gene 0.62 0.34 -0.32
70 AT1G34590 transposable element gene -0.62 0.32 -0.33
71 AT1G74190 receptor like protein 15 receptor like protein 15, receptor
like protein 15		 -0.62 0.3 -0.3
72 AT3G56850 ABA-responsive element binding protein 3 ABA-responsive element binding
protein 3, DPBF3		 0.62 0.33 -0.3
73 AT1G14910 ENTH/ANTH/VHS superfamily protein 0.62 0.33 -0.32
74 AT1G69100 Eukaryotic aspartyl protease family protein -0.62 0.3 -0.29
75 AT4G28010 Tetratricopeptide repeat (TPR)-like superfamily protein -0.62 0.31 -0.32
76 AT1G51990 O-methyltransferase family protein -0.62 0.32 -0.3
77 AT2G11220 transposable element gene 0.62 0.28 -0.32
78 AT2G04300 Leucine-rich repeat protein kinase family protein 0.61 0.32 -0.32
79 AT2G12300 transposable element gene -0.61 0.31 -0.31
80 AT1G32570 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.32
81 AT2G40160 Plant protein of unknown function (DUF828) TBL30 -0.61 0.33 -0.32
82 AT4G33280 AP2/B3-like transcriptional factor family protein 0.61 0.31 -0.31
83 AT1G73430 sec34-like family protein 0.61 0.32 -0.32
84 AT1G70360 F-box family protein -0.61 0.32 -0.31
85 AT1G27070 5'-AMP-activated protein kinase-related 0.61 0.33 -0.32
86 AT1G48620 high mobility group A5 high mobility group A5 0.61 0.33 -0.32
87 AT1G30100 nine-cis-epoxycarotenoid dioxygenase 5 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 5,
nine-cis-epoxycarotenoid
dioxygenase 5		 -0.61 0.32 -0.31
88 AT2G11190 transposable element gene 0.6 0.34 -0.31
89 AT5G07270 XB3 ortholog 3 in Arabidopsis thaliana XB3 ortholog 3 in Arabidopsis
thaliana		 0.6 0.32 -0.3
90 AT1G64180 intracellular protein transport protein USO1-related 0.6 0.31 -0.31
91 AT3G27310 plant UBX domain-containing protein 1 plant UBX domain-containing
protein 1		 0.6 0.33 -0.29
92 AT5G37380 Chaperone DnaJ-domain superfamily protein 0.6 0.3 -0.3
93 AT1G42365 transposable element gene -0.6 0.32 -0.33
94 AT2G21480 Malectin/receptor-like protein kinase family protein -0.6 0.33 -0.31
95 AT5G57130 Clp amino terminal domain-containing protein 0.6 0.32 -0.32
96 AT1G22810 Integrase-type DNA-binding superfamily protein -0.6 0.32 -0.32
97 AT1G30515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 16 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G21740.1); Has 20 Blast hits to 20 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.32
98 AT5G08230 Tudor/PWWP/MBT domain-containing protein 0.6 0.3 -0.33
99 AT3G60730 Plant invertase/pectin methylesterase inhibitor superfamily -0.6 0.32 -0.31
100 AT3G45500 BEST Arabidopsis thaliana protein match is: RING/U-box
protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has
48 Blast hits to 46 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.3 -0.32
101 AT1G67770 terminal EAR1-like 2 terminal EAR1-like 2 -0.6 0.3 -0.32
102 AT5G61620 myb-like transcription factor family protein 0.59 0.31 -0.3
103 AT5G07520 glycine-rich protein 18 ATGRP-8, ATGRP18, glycine-rich
protein 18		 -0.59 0.29 -0.31
104 AT1G74460 GDSL-like Lipase/Acylhydrolase superfamily protein -0.59 0.32 -0.29
105 AT2G19070 spermidine hydroxycinnamoyl transferase spermidine hydroxycinnamoyl
transferase		 -0.59 0.32 -0.34
106 AT4G18395 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.33 -0.31
107 AT5G46620 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.59 0.34 -0.31
108 AT5G43530 Helicase protein with RING/U-box domain 0.59 0.31 -0.34
109 AT4G19780 transposable element gene -0.59 0.32 -0.32
110 AT1G71470 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G22090.1); Has 11 Blast hits
to 11 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 0.59 0.31 -0.32
111 AT1G49960 Xanthine/uracil permease family protein -0.59 0.31 -0.31
112 AT5G38870 transposable element gene -0.59 0.3 -0.31
113 AT5G56620 NAC domain containing protein 99 NAC domain containing protein 99,
NAC domain containing protein 99		 -0.59 0.33 -0.32
114 AT1G15840 unknown protein; Has 111484 Blast hits to 29940 proteins in
1985 species: Archae - 153; Bacteria - 40635; Metazoa -
31564; Fungi - 6444; Plants - 10232; Viruses - 1710; Other
Eukaryotes - 20746 (source: NCBI BLink).		 0.59 0.31 -0.3
115 AT1G29220 transcriptional regulator family protein -0.59 0.3 -0.32
116 ATMG00720 hypothetical protein ORF107D -0.59 0.33 -0.32
117 AT5G61920 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G67170.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.59 0.31 -0.31
118 AT1G80620 S15/NS1, RNA-binding protein -0.59 0.3 -0.34
119 AT4G26280 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.32 -0.32
120 AT4G27550 trehalose-6-phosphatase synthase S4 ARABIDOPSIS THALIANA TREHALOSE
PHOSPHATASE/SYNTHASE 4,
trehalose-6-phosphatase synthase
S4		 -0.59 0.31 -0.31
121 AT1G20940 F-box family protein -0.59 0.31 -0.33
122 AT5G42955 Protein of unknown function (DUF784) -0.59 0.32 -0.33
123 AT1G04600 myosin XI A ATXIA, myosin XI A -0.59 0.33 -0.32
124 AT1G32050 SCAMP family protein -0.58 0.31 -0.32
125 AT3G17280 F-box and associated interaction domains-containing protein -0.58 0.33 -0.3
126 AT3G03320 RNA-binding ASCH domain protein -0.58 0.33 -0.33
127 AT3G12830 SAUR-like auxin-responsive protein family -0.58 0.32 -0.32
128 AT4G30070 low-molecular-weight cysteine-rich 59 low-molecular-weight cysteine-rich
59		 -0.58 0.31 -0.32
129 AT2G31590 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G04730.1); Has 30 Blast hits
to 30 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.58 0.32 -0.33
130 AT5G37690 SGNH hydrolase-type esterase superfamily protein -0.58 0.32 -0.31
131 AT3G60790 F-box family protein -0.57 0.28 -0.32
132 AT5G33350 pseudogene, similar to P0406H10.5, nucleoid DNA-binding
protein cnd41, chloroplast - Nicotiana tabacum, PIR:T01996;
blastp match of 37% identity and 1.5e-57 P-value to
GP|9711879|dbj|BAB07973.1||AP002524 P0406H10.5 {Oryza
sativa (japonica cultivar-group)}		 -0.57 0.3 -0.32
133 AT5G07310 Integrase-type DNA-binding superfamily protein -0.57 0.3 -0.31
134 AT4G19540 IND1(iron-sulfur protein required for NADH
dehydrogenase)-like		 iron-sulfur protein required for
NADH dehydrogenase,
IND1(iron-sulfur protein required
for NADH dehydrogenase)-like		 -0.57 0.32 -0.29
135 AT5G62110 Homeodomain-like superfamily protein -0.57 0.31 -0.32
136 AT1G39430 transposable element gene -0.57 0.32 -0.32
137 AT1G56320 BEST Arabidopsis thaliana protein match is: Glycine-rich
protein family (TAIR:AT5G49350.2); Has 60 Blast hits to 60
proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.31 -0.32
138 AT2G22030 Galactose oxidase/kelch repeat superfamily protein -0.57 0.32 -0.32
139 AT2G10610 transposable element gene -0.57 0.3 -0.31