AGICode | AT1G77490 |
Description | thylakoidal ascorbate peroxidase |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G77490 | thylakoidal ascorbate peroxidase | thylakoidal ascorbate peroxidase | 1 | 0.3 | -0.32 | ||
2 | AT1G79790 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
Arabidopsis thaliana chloroplast FMN hydrolase 1, flavin mononucleotide hydrolase 1 |
0.93 | 0.31 | -0.34 | ||
3 | AT1G32220 | NAD(P)-binding Rossmann-fold superfamily protein | 0.89 | 0.32 | -0.31 | |||
4 | AT1G01790 | K+ efflux antiporter 1 | K+ EFFLUX ANTIPORTER 1, K+ efflux antiporter 1 |
0.88 | 0.29 | -0.33 | ||
5 | AT4G28706 | pfkB-like carbohydrate kinase family protein | 0.86 | 0.31 | -0.33 | |||
6 | AT5G27560 | Domain of unknown function (DUF1995) | 0.86 | 0.33 | -0.31 | |||
7 | AT5G35170 | adenylate kinase family protein | 0.85 | 0.34 | -0.3 | |||
8 | AT1G51110 | Plastid-lipid associated protein PAP / fibrillin family protein |
0.85 | 0.33 | -0.31 | |||
9 | AT1G18060 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
0.84 | 0.32 | -0.3 | |||
10 | AT3G27925 | DegP protease 1 | DegP protease 1, DegP protease 1 | 0.84 | 0.33 | -0.31 | ||
11 | AT5G22620 | phosphoglycerate/bisphosphoglycerate mutase family protein | 0.82 | 0.32 | -0.31 | |||
12 | AT4G31530 | NAD(P)-binding Rossmann-fold superfamily protein | 0.82 | 0.35 | -0.33 | |||
13 | AT3G01960 | unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.82 | 0.33 | -0.32 | |||
14 | AT5G54630 | zinc finger protein-related | 0.81 | 0.3 | -0.32 | |||
15 | AT1G56500 | haloacid dehalogenase-like hydrolase family protein | 0.81 | 0.32 | -0.33 | |||
16 | AT5G62790 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, PIGMENT-DEFECTIVE EMBRYO 129 |
0.8 | 0.31 | -0.31 | ||
17 | AT3G23310 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
0.8 | 0.31 | -0.33 | |||
18 | AT1G35340 | ATP-dependent protease La (LON) domain protein | 0.8 | 0.32 | -0.3 | |||
19 | AT4G23940 | FtsH extracellular protease family | 0.79 | 0.34 | -0.33 | |||
20 | AT5G13410 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.79 | 0.29 | -0.34 | |||
21 | AT4G33470 | histone deacetylase 14 | ATHDA14, histone deacetylase 14 | 0.79 | 0.31 | -0.3 | ||
22 | AT2G30170 | Protein phosphatase 2C family protein | 0.79 | 0.32 | -0.31 | |||
23 | AT1G51110 | Plastid-lipid associated protein PAP / fibrillin family protein |
0.79 | 0.3 | -0.33 | |||
24 | AT1G29700 | Metallo-hydrolase/oxidoreductase superfamily protein | 0.78 | 0.31 | -0.33 | |||
25 | AT1G04620 | coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family |
7-hydroxymethyl chlorophyll a (HMChl) reductase |
0.78 | 0.31 | -0.33 | ||
26 | AT5G59250 | Major facilitator superfamily protein | 0.78 | 0.31 | -0.29 | |||
27 | AT5G04900 | NYC1-like | NYC1-like | 0.78 | 0.31 | -0.31 | ||
28 | AT4G33500 | Protein phosphatase 2C family protein | 0.78 | 0.31 | -0.31 | |||
29 | AT5G40760 | glucose-6-phosphate dehydrogenase 6 | glucose-6-phosphate dehydrogenase 6 |
-0.78 | 0.32 | -0.32 | ||
30 | AT1G67840 | chloroplast sensor kinase | chloroplast sensor kinase | 0.78 | 0.32 | -0.33 | ||
31 | AT3G48420 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.77 | 0.3 | -0.33 | |||
32 | AT5G16710 | dehydroascorbate reductase 1 | dehydroascorbate reductase 1 | 0.77 | 0.31 | -0.34 | ||
33 | AT3G17350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.77 | 0.33 | -0.33 | |||
34 | AT2G31040 | ATP synthase protein I -related | 0.77 | 0.31 | -0.3 | |||
35 | AT2G32860 | beta glucosidase 33 | beta glucosidase 33 | 0.77 | 0.32 | -0.32 | ||
36 | AT3G26932 | dsRNA-binding protein 3 | dsRNA-binding protein 3 | 0.77 | 0.3 | -0.35 | ||
37 | AT2G02990 | ribonuclease 1 | RIBONUCLEASE 1, ribonuclease 1 | -0.77 | 0.32 | -0.31 | ||
38 | AT4G32650 | potassium channel in Arabidopsis thaliana 3 | ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, A. thaliana low-K+-tolerant 1, potassium channel in Arabidopsis thaliana 3, KC1 |
-0.77 | 0.33 | -0.32 | ||
39 | AT3G61080 | Protein kinase superfamily protein | 0.77 | 0.32 | -0.31 | |||
40 | AT3G15520 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.77 | 0.31 | -0.31 | |||
41 | AT3G52155 | Phosphoglycerate mutase family protein | 0.77 | 0.32 | -0.31 | |||
42 | AT4G14210 | phytoene desaturase 3 | PIGMENT DEFECTIVE 226, PHYTOENE DESATURASE, phytoene desaturase 3 |
0.77 | 0.3 | -0.32 | ||
43 | AT5G04360 | limit dextrinase | limit dextrinase, PULLULANASE 1, limit dextrinase, PULLULANASE 1 |
0.77 | 0.3 | -0.29 | ||
44 | AT5G46690 | beta HLH protein 71 | beta HLH protein 71 | 0.76 | 0.34 | -0.31 | ||
45 | AT2G17340 | Uncharacterised conserved protein (UCP030210) | 0.76 | 0.31 | -0.28 | |||
46 | AT4G21680 | NITRATE TRANSPORTER 1.8 | NITRATE TRANSPORTER 1.8 | -0.75 | 0.31 | -0.34 | ||
47 | AT1G52510 | alpha/beta-Hydrolases superfamily protein | 0.75 | 0.32 | -0.31 | |||
48 | AT5G45170 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.75 | 0.29 | -0.33 | |||
49 | AT3G01680 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
sieve element occlusion b, Sieve-Element-Occlusion-Related 1 |
0.75 | 0.3 | -0.3 | ||
50 | AT3G28760 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate synthase, prokaryotic-type (InterPro:IPR002812); Has 390 Blast hits to 390 proteins in 131 species: Archae - 144; Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). |
0.75 | 0.32 | -0.32 | |||
51 | AT1G62790 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.75 | 0.29 | -0.33 | |||
52 | AT1G68400 | leucine-rich repeat transmembrane protein kinase family protein |
0.75 | 0.31 | -0.32 | |||
53 | AT3G01370 | CRM family member 2 | Arabidopsis thaliana CRM family member 2, CRM family member 2 |
0.75 | 0.32 | -0.32 | ||
54 | AT1G68540 | NAD(P)-binding Rossmann-fold superfamily protein | cinnamoyl coA reductase-like 6, tetraketide alpha-pyrone reductase 2 |
0.75 | 0.31 | -0.32 | ||
55 | AT1G56500 | haloacid dehalogenase-like hydrolase family protein | 0.75 | 0.34 | -0.34 | |||
56 | AT5G53450 | OBP3-responsive gene 1 | OBP3-responsive gene 1 | 0.75 | 0.32 | -0.31 | ||
57 | AT3G22425 | imidazoleglycerol-phosphate dehydratase | HISN5A, imidazoleglycerol-phosphate dehydratase |
0.75 | 0.32 | -0.33 | ||
58 | AT3G53470 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35 Blast hits to 35 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.75 | 0.31 | -0.31 | |||
59 | AT3G59110 | Protein kinase superfamily protein | 0.74 | 0.32 | -0.31 | |||
60 | AT2G32100 | ovate family protein 16 | RABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16, ovate family protein 16 |
0.74 | 0.34 | -0.3 | ||
61 | AT5G44380 | FAD-binding Berberine family protein | -0.74 | 0.31 | -0.32 | |||
62 | AT3G11945 | homogentisate prenyltransferase | homogentisate prenyltransferase, homogentisate prenyltransferase, PHYTOENE DESATURATION 2 |
0.74 | 0.33 | -0.32 | ||
63 | AT2G39690 | Protein of unknown function, DUF547 | 0.74 | 0.28 | -0.33 | |||
64 | AT5G16540 | zinc finger nuclease 3 | zinc finger nuclease 3 | 0.74 | 0.29 | -0.33 | ||
65 | AT5G03880 | Thioredoxin family protein | 0.74 | 0.31 | -0.33 | |||
66 | AT2G01140 | Aldolase superfamily protein | PIGMENT DEFECTIVE 345 | -0.74 | 0.3 | -0.33 | ||
67 | AT2G43010 | phytochrome interacting factor 4 | AtPIF4, phytochrome interacting factor 4, SRL2 |
0.74 | 0.3 | -0.3 | ||
68 | AT3G08040 | MATE efflux family protein | ATFRD3, FERRIC REDUCTASE DEFECTIVE 3, MANGANESE ACCUMULATOR 1 |
-0.73 | 0.33 | -0.31 | ||
69 | AT2G42750 | DNAJ heat shock N-terminal domain-containing protein | 0.73 | 0.32 | -0.32 | |||
70 | AT3G26590 | MATE efflux family protein | -0.73 | 0.32 | -0.33 | |||
71 | AT2G20875 | epidermal patterning factor 1 | EPIDERMAL PATTERNING FACTOR 1 | 0.73 | 0.32 | -0.33 | ||
72 | AT1G06240 | Protein of unknown function DUF455 | 0.73 | 0.29 | -0.32 | |||
73 | AT1G54350 | ABC transporter family protein | ATP-binding cassette D2 | 0.73 | 0.33 | -0.33 | ||
74 | AT1G08830 | copper/zinc superoxide dismutase 1 | copper/zinc superoxide dismutase 1 | -0.72 | 0.33 | -0.35 | ||
75 | AT5G58940 | calmodulin-binding receptor-like cytoplasmic kinase 1 | calmodulin-binding receptor-like cytoplasmic kinase 1 |
-0.72 | 0.31 | -0.34 | ||
76 | AT5G07360 | Amidase family protein | -0.72 | 0.33 | -0.32 | |||
77 | AT5G43780 | Pseudouridine synthase/archaeosine transglycosylase-like family protein |
APS4 | -0.71 | 0.32 | -0.32 | ||
78 | AT1G01640 | BTB/POZ domain-containing protein | -0.7 | 0.31 | -0.3 | |||
79 | AT5G14000 | NAC domain containing protein 84 | NAC domain containing protein 84, NAC domain containing protein 84 |
-0.7 | 0.3 | -0.32 | ||
80 | AT4G11350 | Protein of unknown function (DUF604) | -0.69 | 0.3 | -0.33 | |||
81 | AT5G13420 | Aldolase-type TIM barrel family protein | -0.68 | 0.32 | -0.33 | |||
82 | AT3G14610 | cytochrome P450, family 72, subfamily A, polypeptide 7 | cytochrome P450, family 72, subfamily A, polypeptide 7 |
-0.68 | 0.33 | -0.31 | ||
83 | AT3G15590 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.68 | 0.32 | -0.32 | |||
84 | AT2G38860 | Class I glutamine amidotransferase-like superfamily protein | YLS5 | -0.68 | 0.3 | -0.31 | ||
85 | AT5G55050 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.68 | 0.32 | -0.31 | |||
86 | AT1G70140 | formin 8 | formin 8, formin 8 | -0.67 | 0.31 | -0.35 | ||
87 | AT1G70770 | Protein of unknown function DUF2359, transmembrane | -0.66 | 0.3 | -0.33 | |||
88 | AT1G65510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65486.1); Has 22 Blast hits to 22 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.66 | 0.33 | -0.32 | |||
89 | AT5G60250 | zinc finger (C3HC4-type RING finger) family protein | -0.66 | 0.34 | -0.31 | |||
90 | AT5G01830 | ARM repeat superfamily protein | -0.66 | 0.31 | -0.33 | |||
91 | AT4G23700 | cation/H+ exchanger 17 | cation/H+ exchanger 17, cation/H+ exchanger 17 |
-0.65 | 0.31 | -0.33 | ||
92 | AT3G01720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 316; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink). |
-0.65 | 0.3 | -0.32 | |||
93 | AT2G45290 | Transketolase | -0.65 | 0.32 | -0.3 | |||
94 | AT1G76930 | extensin 4 | EXTENSIN 1, extensin 4, extensin 1, extensin 4, OBP3-RESPONSIVE GENE 5 |
-0.65 | 0.31 | -0.33 | ||
95 | AT4G08770 | Peroxidase superfamily protein | peroxidase 37 | -0.65 | 0.31 | -0.31 | ||
96 | AT3G20510 | Transmembrane proteins 14C | -0.64 | 0.31 | -0.32 | |||
97 | AT1G17860 | Kunitz family trypsin and protease inhibitor protein | -0.64 | 0.31 | -0.32 | |||
98 | AT4G22470 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein |
-0.64 | 0.3 | -0.31 | |||
99 | AT1G68290 | endonuclease 2 | endonuclease 2 | -0.64 | 0.31 | -0.29 | ||
100 | AT5G42060 | DEK, chromatin associated protein | -0.63 | 0.31 | -0.29 | |||
101 | AT2G18390 | ADP-ribosylation factor family protein | ARF-LIKE 2, ATARLC1, HALLIMASCH, TITAN 5 |
-0.62 | 0.31 | -0.31 | ||
102 | AT3G14395 | unknown protein; Has 4 Blast hits to 4 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.3 | -0.32 | |||
103 | AT5G11410 | Protein kinase superfamily protein | -0.62 | 0.3 | -0.31 | |||
104 | AT2G39660 | botrytis-induced kinase1 | botrytis-induced kinase1 | -0.62 | 0.33 | -0.33 | ||
105 | AT1G14780 | MAC/Perforin domain-containing protein | -0.62 | 0.32 | -0.31 | |||
106 | AT5G09800 | ARM repeat superfamily protein | -0.61 | 0.32 | -0.34 | |||
107 | AT1G21310 | extensin 3 | extensin 3, extensin 3, ROOT-SHOOT-HYPOCOTYL DEFECTIVE |
-0.61 | 0.3 | -0.32 | ||
108 | AT2G39210 | Major facilitator superfamily protein | -0.61 | 0.34 | -0.31 | |||
109 | AT3G15720 | Pectin lyase-like superfamily protein | -0.6 | 0.33 | -0.33 | |||
110 | AT5G16060 | Cytochrome c oxidase biogenesis protein Cmc1-like | -0.6 | 0.29 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
111 | C0204 | Phosphatidylglycerol-34:2 | - | Phosphatidylglycerol-34:2 | cardiolipin biosynthesis II, linoleate biosynthesis I, glycerophosphodiester degradation, glutathione redox reactions I |
0.91 | 0.44 | -0.46 | ||
112 | C0253 | Threonic acid-1,4-lactone | D,L-Threonic acid-1,4-lactone | - | - | 0.83 | 0.46 | -0.42 | ||
113 | C0162 | MST_1588.3 | - | - | - | 0.83 | 0.43 | -0.45 | ||
114 | C0059 | Arginine amide | - | - | - | 0.78 | 0.44 | -0.46 | ||
115 | C0159 | MST_1505.6 | - | - | - | 0.75 | 0.44 | -0.46 | ||
116 | C0171 | MST_2182.9 | - | - | - | 0.74 | 0.47 | -0.46 | ||
117 | C0227 | Ribose | D-Ribose | D-Ribose | ribose degradation, guanosine nucleotides degradation I, pyrimidine salvage pathway, pyridine nucleotide cycling (plants), adenine and adenosine salvage II, guanosine nucleotides degradation II, guanine and guanosine salvage II, cis-zeatin biosynthesis, adenosine nucleotides degradation I, pyrimidine ribonucleosides degradation II |
-0.73 | 0.42 | -0.47 | ||
118 | C0248 | Sulfoquinovosyldiacylglycerol-36:3 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | 0.73 | 0.49 | -0.49 |