AT1G61040 : vernalization independence 5
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G61040
Description plus-3 domain-containing protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G61040 plus-3 domain-containing protein vernalization independence 5 1 0.29 -0.29
2 AT3G28760 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: 3-dehydroquinate
synthase, prokaryotic-type (InterPro:IPR002812); Has 390
Blast hits to 390 proteins in 131 species: Archae - 144;
Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54;
Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).		 -0.77 0.3 -0.34
3 AT1G54820 Protein kinase superfamily protein -0.75 0.29 -0.31
4 AT3G14610 cytochrome P450, family 72, subfamily A, polypeptide 7 cytochrome P450, family 72,
subfamily A, polypeptide 7		 0.75 0.33 -0.29
5 AT1G70770 Protein of unknown function DUF2359, transmembrane 0.73 0.34 -0.3
6 AT1G73470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 72 Blast hits to 72 proteins
in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.73 0.31 -0.32
7 AT3G18500 DNAse I-like superfamily protein -0.73 0.31 -0.31
8 AT2G31040 ATP synthase protein I -related -0.72 0.33 -0.34
9 AT4G34510 3-ketoacyl-CoA synthase 17 3-ketoacyl-CoA synthase 17 -0.72 0.32 -0.3
10 AT4G27800 thylakoid-associated phosphatase 38 PROTEIN PHOSPHATASE 1,
thylakoid-associated phosphatase
38		 -0.72 0.33 -0.31
11 AT3G21720 isocitrate lyase isocitrate lyase 0.72 0.31 -0.31
12 AT3G11450 DnaJ domain ;Myb-like DNA-binding domain 0.71 0.3 -0.31
13 AT3G47490 HNH endonuclease -0.71 0.31 -0.33
14 AT5G46690 beta HLH protein 71 beta HLH protein 71 -0.7 0.34 -0.32
15 AT5G03670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits
to 624 proteins in 104 species: Archae - 0; Bacteria - 18;
Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other
Eukaryotes - 192 (source: NCBI BLink).		 0.7 0.3 -0.33
16 AT5G26280 TRAF-like family protein 0.7 0.29 -0.31
17 AT1G08830 copper/zinc superoxide dismutase 1 copper/zinc superoxide dismutase 1 0.7 0.3 -0.33
18 AT2G01140 Aldolase superfamily protein PIGMENT DEFECTIVE 345 0.7 0.28 -0.31
19 AT5G47820 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 FRAGILE FIBER 1 -0.69 0.31 -0.32
20 AT5G63530 farnesylated protein 3 ARABIDOPSIS THALIANA FARNESYLATED
PROTEIN 3, farnesylated protein 3		 -0.68 0.3 -0.32
21 AT5G58140 phototropin 2 NON PHOTOTROPIC HYPOCOTYL 1-LIKE,
phototropin 2		 -0.68 0.33 -0.32
22 AT3G12600 nudix hydrolase homolog 16 nudix hydrolase homolog 16, nudix
hydrolase homolog 16		 0.68 0.33 -0.33
23 AT3G13460 evolutionarily conserved C-terminal region 2 evolutionarily conserved
C-terminal region 2		 0.68 0.31 -0.32
24 AT5G67460 O-Glycosyl hydrolases family 17 protein -0.68 0.32 -0.33
25 AT1G70210 CYCLIN D1;1 ATCYCD1;1, CYCLIN D1;1 -0.68 0.32 -0.34
26 AT5G17820 Peroxidase superfamily protein 0.68 0.32 -0.3
27 AT2G32160 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.32 -0.31
28 AT5G01090 Concanavalin A-like lectin family protein -0.68 0.31 -0.32
29 AT1G53200 unknown protein; Has 21 Blast hits to 21 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.68 0.33 -0.28
30 AT1G67840 chloroplast sensor kinase chloroplast sensor kinase -0.68 0.33 -0.31
31 AT4G09950 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.67 0.32 -0.32
32 AT4G02420 Concanavalin A-like lectin protein kinase family protein -0.67 0.33 -0.32
33 AT2G01400 unknown protein; Has 19 Blast hits to 19 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.31 -0.33
34 AT3G59010 pectin methylesterase 61 pectin methylesterase 61 -0.67 0.3 -0.29
35 AT3G46900 copper transporter 2 copper transporter 2 -0.67 0.31 -0.31
36 AT5G42030 ABL interactor-like protein 4 ABL interactor-like protein 4 -0.67 0.32 -0.32
37 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.67 0.32 -0.32
38 AT1G77930 Chaperone DnaJ-domain superfamily protein -0.67 0.31 -0.33
39 AT2G39690 Protein of unknown function, DUF547 -0.67 0.32 -0.32
40 AT4G16060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 42
Blast hits to 42 proteins in 16 species: Archae - 0;
Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 7 (source: NCBI BLink).		 -0.67 0.3 -0.31
41 AT3G16460 Mannose-binding lectin superfamily protein jacalin-related lectin 34 0.67 0.31 -0.31
42 AT4G18570 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.32 -0.3
43 AT5G62790 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1-deoxy-D-xylulose 5-phosphate
reductoisomerase,
PIGMENT-DEFECTIVE EMBRYO 129		 -0.66 0.3 -0.34
44 AT1G50440 RING/FYVE/PHD zinc finger superfamily protein -0.66 0.31 -0.34
45 AT3G24440 Fibronectin type III domain-containing protein VIN3-LIKE 1, VERNALIZATION 5 0.66 0.34 -0.31
46 AT2G17440 plant intracellular ras group-related LRR 5 plant intracellular ras
group-related LRR 5		 0.66 0.3 -0.31
47 AT5G10280 myb domain protein 92 ATMYB64, myb domain protein 92,
myb domain protein 92		 0.66 0.3 -0.33
48 AT1G13590 phytosulfokine 1 precursor phytosulfokine 1 precursor,
phytosulfokine 1 precursor		 0.66 0.29 -0.34
49 AT5G65170 VQ motif-containing protein 0.66 0.32 -0.32
50 AT4G04850 K+ efflux antiporter 3 ATKEA3, K+ efflux antiporter 3 -0.66 0.31 -0.29
51 AT5G08590 SNF1-related protein kinase 2.1 ARABIDOPSIS SERINE/THREONINE
KINASE 2, ARABIDOPSIS SKP1-LIKE1,
SNRK2-1, SNF1-related protein
kinase 2.1, SRK2G		 -0.65 0.31 -0.32
52 AT4G29070 Phospholipase A2 family protein -0.65 0.3 -0.3
53 AT4G23890 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3252 (InterPro:IPR021659); Has 287 Blast hits to 287
proteins in 81 species: Archae - 0; Bacteria - 118; Metazoa
- 12; Fungi - 6; Plants - 40; Viruses - 0; Other Eukaryotes
- 111 (source: NCBI BLink).		 CHLORORESPIRATORY REDUCTION 31,
NADH dehydrogenase-like complex S		 -0.65 0.33 -0.3
54 AT5G24930 CONSTANS-like 4 ATCOL4, CONSTANS-like 4 -0.65 0.3 -0.33
55 AT5G61290 Flavin-binding monooxygenase family protein -0.65 0.29 -0.33
56 AT4G25760 glutamine dumper 2 glutamine dumper 2, glutamine
dumper 2		 -0.65 0.33 -0.29
57 AT4G28706 pfkB-like carbohydrate kinase family protein -0.65 0.31 -0.31
58 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.65 0.3 -0.34
59 AT2G15020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64190.1); Has 72 Blast hits
to 72 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.32 -0.3
60 AT3G01960 unknown protein; Has 13 Blast hits to 13 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.3 -0.31
61 AT1G35340 ATP-dependent protease La (LON) domain protein -0.65 0.3 -0.31
62 AT3G22425 imidazoleglycerol-phosphate dehydratase HISN5A,
imidazoleglycerol-phosphate
dehydratase		 -0.65 0.33 -0.31
63 AT4G00490 beta-amylase 2 beta-amylase 2, BETA-AMYLASE 9 -0.64 0.29 -0.32
64 AT5G09800 ARM repeat superfamily protein 0.64 0.33 -0.31
65 AT2G23840 HNH endonuclease -0.64 0.29 -0.34
66 AT3G29320 Glycosyl transferase, family 35 alpha-glucan phosphorylase 1 -0.64 0.33 -0.31
67 AT1G11480 eukaryotic translation initiation factor-related 0.64 0.32 -0.3
68 AT1G68700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits
to 14 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.64 0.35 -0.35
69 AT1G76020 Thioredoxin superfamily protein -0.64 0.3 -0.32
70 AT1G71340 PLC-like phosphodiesterases superfamily protein AtGDPD4, glycerophosphodiester
phosphodiesterase 4		 -0.64 0.3 -0.34
71 AT2G41780 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.3 -0.32
72 AT2G24220 purine permease 5 purine permease 5, purine permease
5		 -0.64 0.3 -0.3
73 AT5G04900 NYC1-like NYC1-like -0.64 0.3 -0.32
74 AT3G59530 Calcium-dependent phosphotriesterase superfamily protein LESS ADHERENT POLLEN 3 -0.64 0.32 -0.31
75 AT1G27680 ADPGLC-PPase large subunit ADPGLC-PPase large subunit -0.64 0.34 -0.33
76 AT1G21065 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0047
(InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins
in 1137 species: Archae - 215; Bacteria - 2154; Metazoa -
42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes
- 1191 (source: NCBI BLink).		 -0.64 0.31 -0.32
77 AT1G75090 DNA glycosylase superfamily protein -0.64 0.33 -0.32
78 AT1G53180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 13 plant
structures; EXPRESSED DURING: 6 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 0.64 0.3 -0.31
79 AT5G03170 FASCICLIN-like arabinogalactan-protein 11 ARABIDOPSIS FASCICLIN-LIKE
ARABINOGALACTAN-PROTEIN 11,
FASCICLIN-like
arabinogalactan-protein 11		 -0.64 0.31 -0.33
80 AT4G27390 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.64 0.32 -0.33
81 AT3G13480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.63 0.3 -0.32
82 AT5G10310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 10 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.63 0.3 -0.34
83 AT2G32480 ARABIDOPSIS SERIN PROTEASE ARABIDOPSIS SERIN PROTEASE -0.63 0.29 -0.33
84 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.63 0.31 -0.32
85 AT1G75580 SAUR-like auxin-responsive protein family 0.63 0.35 -0.32
86 AT1G76730 NagB/RpiA/CoA transferase-like superfamily protein -0.63 0.32 -0.3
87 AT1G33790 jacalin lectin family protein 0.63 0.32 -0.3
88 AT4G36930 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 SPATULA 0.63 0.3 -0.3
89 AT3G54100 O-fucosyltransferase family protein 0.63 0.3 -0.32
90 AT4G13150 unknown protein; Has 83 Blast hits to 82 proteins in 37
species: Archae - 0; Bacteria - 51; Metazoa - 0; Fungi - 0;
Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.63 0.33 -0.35
91 AT5G46830 NACL-inducible gene 1 NACL-INDUCIBLE GENE 1,
NACL-inducible gene 1		 -0.63 0.32 -0.33
92 AT5G18950 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.3 -0.32
93 AT2G36040 transposable element gene -0.62 0.29 -0.32
94 AT1G67440 Minichromosome maintenance (MCM2/3/5) family protein embryo defective 1688 -0.62 0.3 -0.33
95 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 0.62 0.31 -0.32
96 AT1G63710 cytochrome P450, family 86, subfamily A, polypeptide 7 cytochrome P450, family 86,
subfamily A, polypeptide 7		 -0.62 0.3 -0.32
97 AT1G21910 Integrase-type DNA-binding superfamily protein dehydration response
element-binding protein 26		 0.62 0.3 -0.32
98 AT3G51950 Zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein		 -0.62 0.34 -0.31
99 AT4G13200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 97 Blast hits to 97 proteins
in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2;
Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 -0.62 0.32 -0.3
100 AT3G01920 DHBP synthase RibB-like alpha/beta domain -0.62 0.33 -0.31
101 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor
protein ClpS family protein		 -0.62 0.31 -0.32
102 AT5G37980 Zinc-binding dehydrogenase family protein -0.62 0.3 -0.32
103 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 0.62 0.35 -0.31
104 AT5G10810 enhancer of rudimentary protein, putative ARABIDOPSIS THALIANA ENHANCER OF
RUDIMENTARY HOMOLOGUE, ENHANCER OF
RUDIMENTARY HOMOLOGUE		 -0.62 0.31 -0.3
105 AT1G61760 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.62 0.32 -0.31
106 AT3G21220 MAP kinase kinase 5 ATMAP2K_ALPHA, ARABIDOPSIS
THALIANA MITOGEN-ACTIVATED PROTEIN
KINASE KINASE 5, ARABIDOPSIS
THALIANA MITOGEN-ACTIVATED PROTEIN
KINASE KINASE 5, MAP2K_A, MAP
KINASE KINASE 5, MAP kinase kinase
5		 0.62 0.31 -0.32
107 AT4G14210 phytoene desaturase 3 PIGMENT DEFECTIVE 226, PHYTOENE
DESATURASE, phytoene desaturase 3		 -0.62 0.31 -0.31
108 AT3G01980 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.33 -0.31
109 AT2G44230 Plant protein of unknown function (DUF946) -0.61 0.33 -0.31
110 AT1G56710 Pectin lyase-like superfamily protein -0.61 0.32 -0.3
111 AT1G04620 coenzyme F420 hydrogenase family / dehydrogenase, beta
subunit family		 7-hydroxymethyl chlorophyll a
(HMChl) reductase		 -0.61 0.34 -0.3
112 AT2G03390 uvrB/uvrC motif-containing protein -0.61 0.31 -0.32
113 AT3G50890 homeobox protein 28 homeobox protein 28, homeobox
protein 28, ZINC FINGER
HOMEODOMAIN 7		 -0.61 0.3 -0.32
114 AT4G19830 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 -0.61 0.29 -0.32
115 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 -0.61 0.29 -0.32
116 AT5G10320 unknown protein; Has 54 Blast hits to 53 proteins in 19
species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.29 -0.33
117 AT2G17340 Uncharacterised conserved protein (UCP030210) -0.61 0.32 -0.3
118 AT1G01640 BTB/POZ domain-containing protein 0.61 0.31 -0.33
119 AT5G52540 Protein of unknown function (DUF819) -0.61 0.31 -0.33
120 AT4G30290 xyloglucan endotransglucosylase/hydrolase 19 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 19,
xyloglucan
endotransglucosylase/hydrolase 19		 0.6 0.32 -0.33
121 AT4G08770 Peroxidase superfamily protein peroxidase 37 0.6 0.31 -0.3
122 AT4G25790 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 0.6 0.31 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0158 MST_1480.5 - - - -0.67 0.45 -0.44