AT1G49820 : S-methyl-5-thioribose kinase
Query Information
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AGICode AT1G49820
Description S-methyl-5-thioribose kinase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G49820 S-methyl-5-thioribose kinase S-methyl-5-thioribose kinase,
S-methyl-5-thioribose kinase,
5-methylthioribose kinase 1		 1 0.3 -0.31
2 AT2G19570 cytidine deaminase 1 AT-CDA1, cytidine deaminase 1,
DESZ		 0.82 0.32 -0.33
3 AT3G19520 Protein of unknown function (DUF626) 0.75 0.34 -0.3
4 AT3G20920 translocation protein-related 0.73 0.3 -0.33
5 AT2G18390 ADP-ribosylation factor family protein ARF-LIKE 2, ATARLC1, HALLIMASCH,
TITAN 5		 0.73 0.29 -0.33
6 AT4G11120 translation elongation factor Ts (EF-Ts), putative 0.73 0.33 -0.32
7 AT3G25730 ethylene response DNA binding factor 3 ethylene response DNA binding
factor 3		 0.72 0.3 -0.3
8 AT1G25275 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 18 Blast hits to 18 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.72 0.31 -0.28
9 AT3G17020 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.72 0.32 -0.3
10 AT4G37750 Integrase-type DNA-binding superfamily protein AINTEGUMENTA, CKC, COMPLEMENTING A
PROTEIN KINASE C MUTANT 1, DRAGON		 -0.71 0.31 -0.28
11 AT4G26790 GDSL-like Lipase/Acylhydrolase superfamily protein -0.71 0.31 -0.31
12 AT5G16470 zinc finger (C2H2 type) family protein 0.7 0.32 -0.3
13 AT3G01640 glucuronokinase G ARABIDOPSIS THALIANA
GLUCURONOKINASE, glucuronokinase G		 0.7 0.31 -0.29
14 AT2G35310 Transcriptional factor B3 family protein -0.7 0.31 -0.31
15 AT5G58220 transthyretin-like protein allantoin synthase,
transthyretin-like protein		 0.7 0.3 -0.32
16 AT2G34140 Dof-type zinc finger DNA-binding family protein 0.69 0.32 -0.32
17 AT1G19130 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold
(InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins
in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19;
Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes -
304 (source: NCBI BLink).		 0.69 0.31 -0.32
18 AT5G01210 HXXXD-type acyl-transferase family protein 0.69 0.34 -0.32
19 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 -0.69 0.32 -0.33
20 AT2G40940 ethylene response sensor 1 ETHYLENE RESPONSE SENSOR, ethylene
response sensor 1		 0.69 0.33 -0.32
21 AT5G50740 Heavy metal transport/detoxification superfamily protein -0.69 0.31 -0.32
22 AT3G56370 Leucine-rich repeat protein kinase family protein -0.69 0.32 -0.31
23 AT4G23940 FtsH extracellular protease family -0.68 0.32 -0.3
24 AT1G69523 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.68 0.34 -0.3
25 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 0.68 0.31 -0.31
26 AT5G44030 cellulose synthase A4 cellulose synthase A4, IRREGULAR
XYLEM 5, NWS2		 -0.68 0.3 -0.32
27 AT5G63400 adenylate kinase 1 adenylate kinase 1 0.68 0.31 -0.3
28 AT2G17390 ankyrin repeat-containing 2B ankyrin repeat-containing 2B 0.68 0.3 -0.32
29 AT3G54500 BEST Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183
Blast hits to 175 proteins in 44 species: Archae - 0;
Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120;
Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).		 -0.67 0.3 -0.33
30 AT5G16060 Cytochrome c oxidase biogenesis protein Cmc1-like 0.67 0.29 -0.31
31 AT3G48680 gamma carbonic anhydrase-like 2 AtCAL2, gamma carbonic
anhydrase-like 2		 0.67 0.31 -0.32
32 AT1G54350 ABC transporter family protein ATP-binding cassette D2 -0.67 0.31 -0.34
33 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 -0.67 0.31 -0.31
34 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 0.67 0.3 -0.33
35 AT1G15040 Class I glutamine amidotransferase-like superfamily protein 0.67 0.29 -0.32
36 AT5G42720 Glycosyl hydrolase family 17 protein -0.67 0.32 -0.32
37 AT3G23150 Signal transduction histidine kinase, hybrid-type, ethylene
sensor		 ethylene response 2 0.67 0.33 -0.33
38 AT1G12330 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi -
14; Plants - 217; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.67 0.32 -0.31
39 AT3G61250 myb domain protein 17 myb domain protein 17, LATE
MERISTEM IDENTITY2, myb domain
protein 17		 -0.67 0.32 -0.32
40 AT3G25910 Protein of unknown function (DUF1644) 0.67 0.33 -0.33
41 AT1G70370 polygalacturonase 2 polygalacturonase 2 -0.67 0.33 -0.32
42 AT1G03780 targeting protein for XKLP2 AtTPX2, targeting protein for
XKLP2		 -0.66 0.32 -0.33
43 AT2G29340 NAD-dependent epimerase/dehydratase family protein 0.66 0.36 -0.31
44 AT4G00480 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ATMYC1, myc1 -0.66 0.32 -0.31
45 AT1G51650 ATP synthase epsilon chain, mitochondrial 0.66 0.31 -0.32
46 AT2G16060 hemoglobin 1 hemoglobin 1, ARATH GLB1, ATGLB1,
CLASS I HEMOGLOBIN, hemoglobin 1,
NSHB1		 0.66 0.3 -0.3
47 AT5G13290 Protein kinase superfamily protein CORYNE, SUPPRESSOR OF LLP1 2 -0.66 0.31 -0.31
48 AT2G44080 ARGOS-like ARGOS-like 0.66 0.32 -0.33
49 AT2G42840 protodermal factor 1 protodermal factor 1 -0.65 0.32 -0.3
50 AT2G36320 A20/AN1-like zinc finger family protein 0.65 0.32 -0.33
51 AT2G26330 Leucine-rich receptor-like protein kinase family protein ERECTA, QUANTITATIVE RESISTANCE TO
PLECTOSPHAERELLA 1		 -0.65 0.29 -0.31
52 AT1G01790 K+ efflux antiporter 1 K+ EFFLUX ANTIPORTER 1, K+ efflux
antiporter 1		 -0.65 0.32 -0.33
53 AT3G10985 senescence associated gene 20 ARABIDOPSIS THALIANA WOUND-INDUCED
PROTEIN 12, senescence associated
gene 20, WOUND-INDUCED PROTEIN 12		 0.65 0.32 -0.34
54 AT2G01850 endoxyloglucan transferase A3 ATXTH27, endoxyloglucan
transferase A3, XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 27		 0.65 0.31 -0.34
55 AT5G04910 unknown protein; Has 71 Blast hits to 71 proteins in 36
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.65 0.31 -0.31
56 AT1G25560 AP2/B3 transcription factor family protein ETHYLENE RESPONSE DNA BINDING
FACTOR 1, TEMPRANILLO 1		 0.65 0.31 -0.33
57 AT3G51150 ATP binding microtubule motor family protein -0.65 0.31 -0.3
58 AT5G64760 regulatory particle non-ATPase subunit 5B regulatory particle non-ATPase
subunit 5B		 0.65 0.31 -0.31
59 AT1G17860 Kunitz family trypsin and protease inhibitor protein 0.65 0.3 -0.33
60 AT2G43060 ILI1 binding bHLH 1 ILI1 binding bHLH 1 0.65 0.3 -0.31
61 AT1G05720 selenoprotein family protein 0.65 0.32 -0.28
62 AT5G35970 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.65 0.31 -0.3
63 AT5G08335 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ARABIDOPSIS THALIANA ISOPRENYL
CYSTEINE METHYLTRANSFERASE B,
ATSTE14B, ISOPRENYL CYSTEINE
METHYLTRANSFERASE B		 0.65 0.33 -0.32
64 AT4G18780 cellulose synthase family protein CELLULOSE SYNTHASE 8, CELLULOSE
SYNTHASE 8, IRREGULAR XYLEM 1,
LEAF WILTING 2		 -0.65 0.32 -0.34
65 AT5G66985 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.64 0.33 -0.32
66 ATCG00800 structural constituent of ribosome -0.64 0.31 -0.3
67 AT4G33560 Wound-responsive family protein 0.64 0.31 -0.32
68 AT3G29970 B12D protein 0.64 0.36 -0.31
69 AT4G10180 light-mediated development protein 1 / deetiolated1 (DET1) ATDET1, DE-ETIOLATED 1, FUSCA 2 -0.64 0.31 -0.31
70 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.64 0.32 -0.32
71 AT4G14615 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2346
(InterPro:IPR018625); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G52825.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.33 -0.31
72 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 -0.64 0.32 -0.3
73 AT1G22160 Protein of unknown function (DUF581) -0.64 0.32 -0.33
74 AT1G75090 DNA glycosylase superfamily protein -0.64 0.3 -0.3
75 AT1G12280 LRR and NB-ARC domains-containing disease resistance
protein		 -0.64 0.29 -0.31
76 AT3G43430 RING/U-box superfamily protein 0.64 0.3 -0.29
77 AT1G77380 amino acid permease 3 amino acid permease 3, ATAAP3 0.63 0.33 -0.32
78 AT1G05180 NAD(P)-binding Rossmann-fold superfamily protein AUXIN RESISTANT 1 0.63 0.31 -0.32
79 AT4G18820 AAA-type ATPase family protein -0.63 0.33 -0.29
80 AT2G44065 Ribosomal protein L2 family 0.63 0.3 -0.32
81 AT3G06220 AP2/B3-like transcriptional factor family protein -0.63 0.32 -0.33
82 ATCG00810 ribosomal protein L22 ribosomal protein L22 -0.63 0.31 -0.32
83 AT5G05100 Single-stranded nucleic acid binding R3H protein 0.63 0.32 -0.31
84 AT3G04350 Plant protein of unknown function (DUF946) 0.63 0.32 -0.32
85 AT5G63600 flavonol synthase 5 ATFLS5, flavonol synthase 5 0.63 0.32 -0.31
86 AT2G42280 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.63 0.29 -0.29
87 AT2G16660 Major facilitator superfamily protein 0.63 0.31 -0.32
88 AT3G61080 Protein kinase superfamily protein -0.63 0.32 -0.33
89 AT1G50240 Protein kinase family protein with ARM repeat domain FUSED -0.63 0.3 -0.3
90 AT2G43350 glutathione peroxidase 3 glutathione peroxidase 3,
glutathione peroxidase 3		 0.63 0.28 -0.32
91 AT2G37750 unknown protein; Has 21 Blast hits to 21 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.32 -0.32
92 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 -0.63 0.3 -0.3
93 AT2G18890 Protein kinase superfamily protein -0.62 0.31 -0.31
94 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 -0.62 0.31 -0.32
95 AT1G51805 Leucine-rich repeat protein kinase family protein -0.62 0.33 -0.32
96 AT5G07690 myb domain protein 29 myb domain protein 29, myb domain
protein 29, PRODUCTION OF
METHIONINE-DERIVED GLUCOSINOLATE 2		 -0.62 0.33 -0.33
97 AT1G21060 Protein of unknown function, DUF547 -0.62 0.3 -0.32
98 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 -0.62 0.32 -0.33
99 AT3G03690 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 unfertilized embryo sac 7 -0.62 0.32 -0.29
100 AT1G55550 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.29 -0.32
101 AT3G53420 plasma membrane intrinsic protein 2A PLASMA MEMBRANE INTRINSIC PROTEIN
2, PLASMA MEMBRANE INTRINSIC
PROTEIN 2;1, plasma membrane
intrinsic protein 2A		 -0.61 0.32 -0.32
102 AT3G60740 ARM repeat superfamily protein CHAMPIGNON, EMBRYO DEFECTIVE 133,
TUBULIN FOLDING COFACTOR D, TITAN
1		 -0.61 0.31 -0.31
103 AT3G63300 FORKED 1 FORKED 1 -0.61 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
104 C0227 Ribose D-Ribose D-Ribose ribose degradation,
guanosine nucleotides degradation I,
pyrimidine salvage pathway,
pyridine nucleotide cycling (plants),
adenine and adenosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage II,
cis-zeatin biosynthesis,
adenosine nucleotides degradation I,
pyrimidine ribonucleosides degradation II 		0.82 0.48 -0.46 C0227
105 C0063 Campesterol - Campesterol brassinosteroid biosynthesis I,
brassinosteroid biosynthesis II,
plant sterol biosynthesis,
brassinosteroid biosynthesis III 		-0.75 0.46 -0.49 C0063
106 C0183 MST_3033.1 - - - -0.74 0.45 -0.44
107 C0239 Spermidine - Spermidine spermine biosynthesis,
spermine and spermidine degradation III,
beta-alanine biosynthesis I,
hypusine biosynthesis,
spermidine hydroxycinnamic acid conjugates biosynthesis,
spermidine biosynthesis I 		0.66 0.45 -0.46 C0239
108 C0170 MST_2128.3 - - - -0.65 0.41 -0.47