AT1G72270 : -
Query Information
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AGICode AT1G72270
Description CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G72270 CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis
N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G27010.1); Has
772 Blast hits to 657 proteins in 120 species: Archae - 0;
Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322;
Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).		 1 0.35 -0.3
2 AT1G04645 Plant self-incompatibility protein S1 family 0.63 0.32 -0.32
3 AT2G27100 C2H2 zinc-finger protein SERRATE (SE) SERRATE -0.61 0.3 -0.29
4 AT1G32570 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.32 -0.34
5 AT5G08490 Tetratricopeptide repeat (TPR)-like superfamily protein SLOW GROWTH 1 -0.57 0.31 -0.32
6 AT5G10270 cyclin-dependent kinase C;1 cyclin-dependent kinase C;1 -0.56 0.33 -0.31
7 AT5G02600 Heavy metal transport/detoxification superfamily protein SODIUM POTASSIUM ROOT DEFECTIVE 1,
nuclear-enriched phloem companion
cell gene 6		 0.56 0.32 -0.3
8 AT3G20490 unknown protein; Has 754 Blast hits to 165 proteins in 64
species: Archae - 0; Bacteria - 48; Metazoa - 26; Fungi -
25; Plants - 36; Viruses - 0; Other Eukaryotes - 619
(source: NCBI BLink).		 -0.55 0.32 -0.34
9 AT1G34580 Major facilitator superfamily protein 0.55 0.3 -0.31
10 AT2G10465 transposable element gene 0.54 0.31 -0.29
11 AT4G03160 BEST Arabidopsis thaliana protein match is: AP2/B3-like
transcriptional factor family protein (TAIR:AT4G03170.1);
Has 46 Blast hits to 46 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 29; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.54 0.31 -0.3
12 AT5G56800 Protein with RNI-like/FBD-like domains 0.54 0.29 -0.29
13 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family 0.53 0.32 -0.33
14 AT1G69560 myb domain protein 105 MYB DOMAIN PROTEIN 105, LATERAL
ORGAN FUSION 2, myb domain protein
105		 0.53 0.33 -0.3
15 AT5G54050 Cysteine/Histidine-rich C1 domain family protein 0.53 0.31 -0.32
16 AT4G07580 transposable element gene 0.53 0.31 -0.32
17 AT5G66010 RNA-binding (RRM/RBD/RNP motifs) family protein -0.52 0.32 -0.29
18 AT1G15720 TRF-like 5 TRF-like 5 0.52 0.33 -0.29
19 AT3G43080 transposable element gene 0.52 0.31 -0.32
20 AT3G14460 LRR and NB-ARC domains-containing disease resistance
protein		 0.52 0.31 -0.32
21 AT1G13310 Endosomal targeting BRO1-like domain-containing protein -0.52 0.31 -0.29
22 AT3G56000 cellulose synthase like A14 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE A14, cellulose
synthase like A14		 0.51 0.33 -0.3
23 AT3G58630 sequence-specific DNA binding transcription factors -0.51 0.31 -0.31
24 AT3G25160 ER lumen protein retaining receptor family protein 0.51 0.29 -0.32
25 AT3G58000 VQ motif-containing protein 0.51 0.31 -0.32
26 AT1G27550 F-box family protein -0.51 0.31 -0.32
27 AT1G07190 BEST Arabidopsis thaliana protein match is: lon protease 1
(TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in
47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi -
11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.5 0.32 -0.3
28 AT5G66260 SAUR-like auxin-responsive protein family 0.5 0.31 -0.34
29 AT1G76370 Protein kinase superfamily protein -0.49 0.31 -0.3
30 AT5G28650 WRKY DNA-binding protein 74 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 74, WRKY
DNA-binding protein 74		 -0.49 0.31 -0.31
31 AT3G17140 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.48 0.32 -0.33
32 AT1G28430 cytochrome P450, family 705, subfamily A, polypeptide 24 cytochrome P450, family 705,
subfamily A, polypeptide 24		 0.48 0.31 -0.3
33 AT2G21990 Protein of unknown function, DUF617 0.48 0.31 -0.33
34 AT1G31220 Formyl transferase 0.48 0.3 -0.3
35 AT1G54170 CTC-interacting domain 3 CTC-interacting domain 3 -0.48 0.28 -0.32
36 AT3G25630 transposable element gene 0.48 0.33 -0.3
37 AT1G47890 receptor like protein 7 receptor like protein 7, receptor
like protein 7		 0.48 0.31 -0.31
38 AT3G23850 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.48 0.32 -0.31
39 AT3G01080 WRKY DNA-binding protein 58 WRKY DNA-BINDING PROTEIN 58, WRKY
DNA-binding protein 58		 0.48 0.29 -0.3
40 AT1G79250 AGC kinase 1.7 AGC kinase 1.7 0.48 0.32 -0.31
41 AT4G14790 ATP-dependent RNA helicase, mitochondrial (SUV3) ATSUV3, embryo sac development
arrest 15		 -0.47 0.31 -0.31
42 AT2G21660 cold, circadian rhythm, and rna binding 2 GLYCINE RICH PROTEIN 7, cold,
circadian rhythm, and rna binding
2, GLYCINE-RICH RNA-BINDING
PROTEIN 7, GLYCINE-RICH
RNA-BINDING PROTEIN 7		 -0.47 0.32 -0.32
43 AT5G52070 Agenet domain-containing protein -0.47 0.32 -0.33
44 AT4G34880 Amidase family protein -0.47 0.35 -0.29
45 AT2G23830 PapD-like superfamily protein 0.47 0.31 -0.33
46 AT2G10370 transposable element gene 0.47 0.31 -0.34
47 AT3G04270 unknown protein; Has 7 Blast hits to 7 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.47 0.32 -0.32
48 AT3G28360 P-glycoprotein 16 ATP-binding cassette B16,
P-glycoprotein 16		 0.46 0.34 -0.33
49 AT5G39680 Pentatricopeptide repeat (PPR) superfamily protein EMBRYO DEFECTIVE 2744 -0.46 0.29 -0.32
50 AT1G09790 COBRA-like protein 6 precursor COBRA-like protein 6 precursor 0.46 0.31 -0.31
51 AT5G39400 Calcium/lipid-binding (CaLB) phosphatase ATPTEN1, Phosphatase and TENsin
homolog deleted on chromosome ten
1		 0.46 0.32 -0.3
52 AT5G50320 radical SAM domain-containing protein / GCN5-related
N-acetyltransferase (GNAT) family protein		 Elongator protein 3,
enhancer-of-asymmetric leaves-two
1, ELONGATA 3, Elongator protein
3, HISTONE ACETYLTRANSFERASE 8,
HISTONE ACETYLTRANSFERASE OF THE
GNAT FAMILY 3		 -0.45 0.31 -0.32
53 AT3G62780 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.45 0.31 -0.33
54 AT2G18920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: synergid; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.45 0.31 -0.29
55 AT2G32560 F-box family protein 0.44 0.33 -0.31
56 AT2G15540 transposable element gene 0.44 0.29 -0.3
57 AT1G21970 Histone superfamily protein AtLEC1, EMBRYO DEFECTIVE 212,
EMBRYO DEFECTIVE 212, LEAFY
COTYLEDON 1, NUCLEAR FACTOR Y,
SUBUNIT B9		 0.44 0.31 -0.33
58 AT1G02980 cullin 2 ATCUL2, cullin 2 0.44 0.34 -0.32
59 AT1G49290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits
to 93 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.44 0.31 -0.33