AT1G52240 : ATROPGEF11
Query Information
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AGICode AT1G52240
Description RHO guanyl-nucleotide exchange factor 11
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 1 0.32 -0.3
2 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 -0.75 0.34 -0.31
3 AT3G55460 SC35-like splicing factor 30 SC35-like splicing factor 30,
SC35-like splicing factor 30		 0.75 0.3 -0.31
4 AT1G54060 6B-interacting protein 1-like 1 6B-interacting protein 1-like 1 0.72 0.31 -0.32
5 AT5G08440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23490.1); Has 141 Blast
hits to 139 proteins in 35 species: Archae - 0; Bacteria -
9; Metazoa - 21; Fungi - 6; Plants - 94; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.71 0.33 -0.3
6 AT3G02580 sterol 1 BOULE 1, DWARF 7, sterol 1 0.7 0.32 -0.33
7 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 -0.69 0.31 -0.31
8 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 0.68 0.29 -0.29
9 AT2G02660 F-box associated ubiquitination effector family protein 0.67 0.31 -0.3
10 AT4G34320 Protein of unknown function (DUF677) -0.67 0.33 -0.33
11 AT5G21170 5'-AMP-activated protein kinase beta-2 subunit protein AKINBETA1 0.66 0.33 -0.32
12 AT1G19060 Protein of unknown function (DUF626) -0.66 0.32 -0.32
13 AT1G48220 Protein kinase superfamily protein -0.66 0.33 -0.31
14 AT5G17480 pollen calcium-binding protein 1 pollen calcium-binding protein 1,
pollen calcium-binding protein 1		 0.65 0.31 -0.31
15 AT5G64920 COP1-interacting protein 8 COP1-interacting protein 8 0.65 0.33 -0.33
16 AT4G07890 transposable element gene 0.65 0.31 -0.31
17 AT2G17880 Chaperone DnaJ-domain superfamily protein 0.65 0.31 -0.31
18 AT5G54220 Cysteine-rich protein -0.65 0.32 -0.32
19 AT1G63110 GPI transamidase subunit PIG-U 0.64 0.33 -0.32
20 AT4G31720 TBP-associated factor II 15 SALT TOLERANCE DURING GERMINATION
1, TBP-ASSOCIATED FACTOR 10,
TBP-associated factor II 15		 0.64 0.32 -0.29
21 AT2G23310 Rer1 family protein ATRER1C1 0.64 0.31 -0.3
22 AT1G20100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G75860.1); Has 471 Blast hits
to 438 proteins in 92 species: Archae - 0; Bacteria - 14;
Metazoa - 217; Fungi - 43; Plants - 91; Viruses - 1; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.64 0.32 -0.34
23 AT2G19420 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.64 0.32 -0.3
24 AT5G04470 cyclin-dependent protein kinase inhibitors SIAMESE 0.64 0.32 -0.31
25 AT1G13190 RNA-binding (RRM/RBD/RNP motifs) family protein 0.64 0.32 -0.32
26 AT3G07420 asparaginyl-tRNA synthetase 2 ASPARAGINYL-TRNA SYNTHETASE 2,
asparaginyl-tRNA synthetase 2,
SYNTHETASE C2, ASPARAGINYL-TRNA
SYNTHETASE 2		 -0.63 0.3 -0.31
27 AT4G09830 Uncharacterised conserved protein UCP009193 0.63 0.32 -0.32
28 AT4G10820 F-box family protein -0.63 0.31 -0.31
29 AT2G15570 Thioredoxin superfamily protein ATHM3, Arabidopsis thioredoxin
M-type 3, GFP ARRESTED TRAFFICKING
1, THIOREDOXIN-M3		 0.63 0.32 -0.31
30 AT2G14550 pseudogene, putative pre-mRNA splicing factor,
non-consensus splice donor TA at exon 5; blastp match of
67% identity and 1.1e-68 P-value to
GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing
factor 3b, subunit 4, 49kD {Xenopus laevis}		 0.63 0.31 -0.32
31 AT4G05280 transposable element gene -0.63 0.32 -0.32
32 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.31 -0.3
33 AT5G64390 RNA-binding KH domain-containing protein HUA ENHANCER 4 -0.63 0.32 -0.33
34 AT2G10050 transposable element gene -0.63 0.32 -0.29
35 AT1G12910 Transducin/WD40 repeat-like superfamily protein ANTHOCYANIN11, LIGHT-REGULATED WD
1		 0.62 0.32 -0.31
36 AT1G20400 Protein of unknown function (DUF1204) 0.62 0.32 -0.31
37 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED -0.62 0.31 -0.33
38 AT1G01740 Protein kinase protein with tetratricopeptide repeat domain -0.62 0.31 -0.31
39 AT3G04730 indoleacetic acid-induced protein 16 indoleacetic acid-induced protein
16		 0.62 0.31 -0.29
40 AT5G22540 Plant protein of unknown function (DUF247) -0.62 0.31 -0.3
41 AT3G06990 Cysteine/Histidine-rich C1 domain family protein 0.62 0.32 -0.33
42 AT3G07000 Cysteine/Histidine-rich C1 domain family protein 0.62 0.31 -0.3
43 AT1G70990 proline-rich family protein 0.62 0.3 -0.32
44 AT5G10420 MATE efflux family protein -0.61 0.33 -0.32
45 AT4G16400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13175.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.32 -0.35
46 AT2G31930 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.61 0.32 -0.3
47 AT1G67770 terminal EAR1-like 2 terminal EAR1-like 2 -0.61 0.33 -0.32
48 AT5G01620 TRICHOME BIREFRINGENCE-LIKE 35 TRICHOME BIREFRINGENCE-LIKE 35 0.61 0.32 -0.32
49 AT1G53690 DNA directed RNA polymerase, 7 kDa subunit 0.61 0.3 -0.33
50 AT3G16970 Plant self-incompatibility protein S1 family 0.6 0.32 -0.29
51 AT1G34280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.29
52 AT5G11290 Plant protein of unknown function (DUF247) -0.6 0.31 -0.3
53 AT4G20490 transposable element gene -0.6 0.32 -0.32
54 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 -0.6 0.32 -0.32
55 AT1G61710 Cysteine/Histidine-rich C1 domain family protein -0.59 0.32 -0.31
56 AT3G14020 nuclear factor Y, subunit A6 nuclear factor Y, subunit A6 -0.59 0.3 -0.33
57 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 0.59 0.32 -0.31
58 AT3G50870 GATA type zinc finger transcription factor family protein GATA TRANSCRIPTION FACTOR 18,
HANABA TANARU, MONOPOLE		 0.59 0.32 -0.3
59 AT3G12470 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.59 0.33 -0.3
60 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 -0.59 0.33 -0.33
61 AT5G18120 APR-like 7 APR-like 7, APR-like 7 0.59 0.33 -0.31
62 AT4G13130 Cysteine/Histidine-rich C1 domain family protein 0.59 0.29 -0.31
63 AT5G14940 Major facilitator superfamily protein -0.59 0.3 -0.31
64 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 -0.59 0.31 -0.32
65 AT1G11360 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.59 0.3 -0.31
66 AT4G10910 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.58 0.31 -0.33
67 AT5G41330 BTB/POZ domain with WD40/YVTN repeat-like protein -0.58 0.32 -0.3
68 AT3G22220 hAT transposon superfamily 0.58 0.3 -0.33
69 AT2G36400 growth-regulating factor 3 growth-regulating factor 3,
growth-regulating factor 3		 0.58 0.32 -0.31
70 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.58 0.3 -0.29
71 AT5G59940 Cysteine/Histidine-rich C1 domain family protein 0.58 0.3 -0.29
72 AT2G14950 transposable element gene 0.58 0.29 -0.31
73 AT5G19790 related to AP2 11 related to AP2 11 0.58 0.3 -0.31
74 AT1G46912 F-box associated ubiquitination effector family protein -0.58 0.31 -0.33
75 AT4G32700 helicases;ATP-dependent helicases;nucleic acid binding;ATP
binding;DNA-directed DNA polymerases;DNA binding		 TEBICHI -0.58 0.3 -0.31
76 AT5G07040 RING/U-box superfamily protein 0.58 0.31 -0.33
77 AT2G45580 cytochrome P450, family 76, subfamily C, polypeptide 3 cytochrome P450, family 76,
subfamily C, polypeptide 3		 0.58 0.32 -0.3
78 AT5G39230 TFIIB zinc-binding protein 0.58 0.33 -0.31
79 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 -0.57 0.32 -0.32
80 AT1G63670 Protein of unknown function (DUF3741) -0.57 0.32 -0.31
81 AT3G20850 proline-rich family protein 0.57 0.31 -0.33
82 AT1G47885 Ribonuclease inhibitor -0.57 0.31 -0.32
83 AT3G09130 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G42786.1); Has 7 Blast hits to
7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.31 -0.3
84 AT2G19180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16840.1); Has 64 Blast hits
to 64 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.57 0.33 -0.33
85 AT5G47150 YDG/SRA domain-containing protein 0.57 0.33 -0.31
86 AT5G28860 transposable element gene 0.56 0.29 -0.31
87 AT3G60570 expansin B5 expansin B5, ATHEXP BETA 1.3,
expansin B5		 -0.56 0.31 -0.31
88 AT2G19290 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.34 -0.32
89 AT3G51370 Protein phosphatase 2C family protein 0.56 0.33 -0.31
90 AT4G17585 Aluminium activated malate transporter family protein -0.56 0.3 -0.31
91 AT2G44730 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 0.56 0.29 -0.34
92 AT4G37240 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.56 0.31 -0.33
93 AT4G37320 cytochrome P450, family 81, subfamily D, polypeptide 5 cytochrome P450, family 81,
subfamily D, polypeptide 5		 -0.56 0.32 -0.32
94 AT1G13570 F-box/RNI-like superfamily protein 0.56 0.33 -0.3
95 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein -0.56 0.31 -0.3
96 AT2G27300 NTM1-like 8 Arabidopsis NAC domain containing
protein 40, NTM1-like 8		 -0.56 0.29 -0.32
97 AT4G31950 cytochrome P450, family 82, subfamily C, polypeptide 3 cytochrome P450, family 82,
subfamily C, polypeptide 3		 -0.56 0.33 -0.32
98 AT2G24560 GDSL-like Lipase/Acylhydrolase family protein -0.56 0.31 -0.32
99 AT3G30510 transposable element gene 0.56 0.32 -0.32
100 AT1G35515 high response to osmotic stress 10 high response to osmotic stress
10, MYB8		 0.56 0.33 -0.3
101 AT5G28560 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; Has 0 Blast hits to 0 proteins in 0 species
(source: NCBI BLink).		 0.56 0.34 -0.31
102 AT4G18410 transposable element gene -0.56 0.31 -0.3
103 AT3G20700 F-box associated ubiquitination effector family protein -0.56 0.32 -0.32
104 AT5G24070 Peroxidase superfamily protein 0.55 0.31 -0.31
105 AT5G01780 2-oxoglutarate-dependent dioxygenase family protein -0.55 0.33 -0.31
106 AT3G43330 transposable element gene 0.55 0.3 -0.3
107 AT1G14110 fucosyltransferase 9 ATFUT9, fucosyltransferase 9 -0.55 0.33 -0.31
108 AT2G04710 transposable element gene -0.55 0.32 -0.32
109 AT5G18410 transcription activators ATSRA1, KLUNKER, PIROGI, PIROGI
121, PIRP, SRA1		 0.55 0.32 -0.29
110 AT1G32650 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.55 0.33 -0.3
111 AT2G42370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58110.2); Has 205 Blast hits
to 191 proteins in 60 species: Archae - 3; Bacteria - 23;
Metazoa - 73; Fungi - 8; Plants - 34; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 -0.55 0.33 -0.32
112 AT3G59910 Ankyrin repeat family protein -0.54 0.31 -0.31
113 AT1G26500 Pentatricopeptide repeat (PPR) superfamily protein -0.54 0.32 -0.31
114 AT5G01030 Protein of unknown function (DUF3527) -0.54 0.31 -0.31
115 AT1G03430 histidine-containing phosphotransfer factor 5 histidine-containing
phosphotransfer factor 5		 -0.54 0.31 -0.35
116 AT3G31340 transposable element gene -0.54 0.33 -0.33
117 AT3G30190 transposable element gene -0.54 0.3 -0.32
118 AT1G42570 pseudogene, similar to P0529E05.9, blastp match of 56%
identity and 1.2e-110 P-value to
GP|18461196|dbj|BAB84393.1||AP003279 P0529E05.9 {Oryza
sativa (japonica cultivar-group)}		 -0.54 0.32 -0.32
119 AT3G57630 exostosin family protein -0.54 0.31 -0.33
120 AT2G44950 histone mono-ubiquitination 1 histone mono-ubiquitination 1,
REDUCED DORMANCY 4		 -0.54 0.32 -0.34
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
121 C0145 Maltotetraose - Maltotetraose starch degradation II -0.7 0.45 -0.44 C0145