AT1G72650 : TRF-like 6
Query Information
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AGICode AT1G72650
Description TRF-like 6
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G72650 TRF-like 6 TRF-like 6 1 0.32 -0.3
2 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein -0.77 0.31 -0.29
3 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.74 0.29 -0.32
4 AT5G02050 Mitochondrial glycoprotein family protein -0.72 0.33 -0.31
5 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 -0.72 0.32 -0.32
6 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR -0.72 0.33 -0.31
7 AT2G30050 transducin family protein / WD-40 repeat family protein -0.72 0.32 -0.32
8 AT5G23300 pyrimidine d pyrimidine d -0.72 0.32 -0.32
9 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 -0.71 0.31 -0.3
10 AT2G35060 K+ uptake permease 11 K+ uptake permease 11 0.71 0.31 -0.32
11 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.71 0.31 -0.31
12 AT4G30800 Nucleic acid-binding, OB-fold-like protein -0.71 0.32 -0.32
13 AT5G64650 Ribosomal protein L17 family protein -0.71 0.29 -0.33
14 AT2G39795 Mitochondrial glycoprotein family protein -0.71 0.34 -0.32
15 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 -0.71 0.29 -0.32
16 AT5G27470 seryl-tRNA synthetase / serine--tRNA ligase -0.71 0.32 -0.33
17 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.71 0.33 -0.3
18 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 -0.7 0.33 -0.32
19 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 -0.7 0.31 -0.31
20 AT1G14980 chaperonin 10 chaperonin 10 -0.7 0.32 -0.3
21 AT5G03300 adenosine kinase 2 adenosine kinase 2 -0.7 0.33 -0.33
22 AT5G27820 Ribosomal L18p/L5e family protein -0.7 0.33 -0.3
23 AT5G40770 prohibitin 3 prohibitin 3, prohibitin 3 -0.7 0.31 -0.31
24 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.31 -0.32
25 AT5G45590 Ribosomal protein L35 -0.69 0.32 -0.32
26 AT2G40420 Transmembrane amino acid transporter family protein 0.69 0.33 -0.31
27 AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain		 -0.69 0.3 -0.32
28 AT2G31725 Eukaryotic protein of unknown function (DUF842) -0.69 0.32 -0.31
29 AT1G26740 Ribosomal L32p protein family -0.69 0.32 -0.31
30 AT4G15475 F-box/RNI-like superfamily protein 0.69 0.32 -0.29
31 AT1G07210 Ribosomal protein S18 -0.69 0.31 -0.32
32 AT4G36420 Ribosomal protein L12 family protein -0.68 0.31 -0.32
33 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 0.68 0.29 -0.31
34 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6		 -0.68 0.32 -0.3
35 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.3 -0.32
36 AT1G64220 translocase of outer membrane 7 kDa subunit 2 translocase of outer membrane 7
kDa subunit 2		 -0.68 0.31 -0.3
37 AT1G52930 Ribosomal RNA processing Brix domain protein -0.68 0.3 -0.31
38 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 -0.68 0.29 -0.32
39 AT2G47640 Small nuclear ribonucleoprotein family protein -0.68 0.31 -0.31
40 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 -0.68 0.32 -0.32
41 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 -0.68 0.32 -0.3
42 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 -0.68 0.31 -0.33
43 AT5G07110 prenylated RAB acceptor 1.B6 prenylated RAB acceptor 1.B6 -0.67 0.32 -0.31
44 AT2G42710 Ribosomal protein L1p/L10e family -0.67 0.32 -0.31
45 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.33 -0.29
46 AT4G29390 Ribosomal protein S30 family protein -0.67 0.33 -0.32
47 AT1G23100 GroES-like family protein -0.67 0.31 -0.33
48 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 -0.67 0.32 -0.34
49 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 -0.67 0.32 -0.28
50 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein -0.67 0.32 -0.3
51 AT5G55940 Uncharacterised protein family (UPF0172) embryo defective 2731 -0.67 0.32 -0.34
52 AT3G22300 ribosomal protein S10 ribosomal protein S10 -0.67 0.32 -0.31
53 AT1G02360 Chitinase family protein -0.67 0.31 -0.31
54 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.67 0.33 -0.34
55 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11		 -0.67 0.33 -0.3
56 AT4G35050 Transducin family protein / WD-40 repeat family protein MULTICOPY SUPPRESSOR OF IRA1 3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 3		 -0.66 0.32 -0.33
57 AT2G46230 PIN domain-like family protein -0.66 0.32 -0.3
58 AT2G33845 Nucleic acid-binding, OB-fold-like protein -0.66 0.29 -0.29
59 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.66 0.31 -0.33
60 AT2G44860 Ribosomal protein L24e family protein -0.66 0.31 -0.32
61 AT5G12410 THUMP domain-containing protein -0.66 0.32 -0.29
62 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.31 -0.3
63 AT1G74030 enolase 1 enolase 1 -0.66 0.33 -0.33
64 AT3G08020 PHD finger family protein 0.66 0.31 -0.31
65 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 -0.66 0.32 -0.3
66 AT1G72730 DEA(D/H)-box RNA helicase family protein -0.66 0.33 -0.31
67 AT3G12370 Ribosomal protein L10 family protein -0.66 0.3 -0.34
68 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.65 0.33 -0.35
69 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.65 0.31 -0.29
70 AT1G23320 tryptophan aminotransferase related 1 tryptophan aminotransferase
related 1		 -0.65 0.31 -0.32
71 AT2G18670 RING/U-box superfamily protein 0.65 0.31 -0.31
72 AT1G73940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits
to 54 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.29 -0.32
73 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.65 0.31 -0.32
74 AT2G21160 Translocon-associated protein (TRAP), alpha subunit -0.65 0.32 -0.31
75 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.65 0.28 -0.31
76 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 -0.65 0.34 -0.29
77 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 0.65 0.31 -0.31
78 AT5G49010 DNA replication protein-related EMBRYO DEFECTIVE 2812, SYNTHETIC
LETHALITY WITH DPB11-1 5		 -0.65 0.31 -0.3
79 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 -0.65 0.34 -0.3
80 AT1G71430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 64
Blast hits to 64 proteins in 28 species: Archae - 0;
Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.64 0.31 -0.3
81 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 0.64 0.32 -0.33
82 AT1G22450 cytochrome C oxidase 6B CYTOCHROME C OXIDASE 6B2,
cytochrome C oxidase 6B		 -0.64 0.3 -0.31
83 AT5G40200 DegP protease 9 DegP protease 9 -0.64 0.34 -0.31
84 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.64 0.32 -0.27
85 AT1G70350 unknown protein; Has 98 Blast hits to 98 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.33
86 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.33
87 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.32 -0.32
88 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.64 0.3 -0.32
89 AT5G20840 Phosphoinositide phosphatase family protein 0.64 0.31 -0.32
90 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.64 0.3 -0.33
91 AT5G14030 translocon-associated protein beta (TRAPB) family protein -0.64 0.33 -0.29
92 AT5G16930 AAA-type ATPase family protein -0.64 0.31 -0.31
93 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 -0.64 0.3 -0.32
94 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.64 0.32 -0.32
95 AT4G20020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast
hits to 16023 proteins in 1033 species: Archae - 4;
Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants -
3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI
BLink).		 -0.64 0.31 -0.32
96 AT5G23290 prefoldin 5 prefoldin 5 -0.63 0.31 -0.31
97 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.63 0.3 -0.3
98 AT4G34040 RING/U-box superfamily protein 0.63 0.34 -0.28
99 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.63 0.33 -0.34
100 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 -0.63 0.31 -0.33
101 AT5G40590 Cysteine/Histidine-rich C1 domain family protein -0.63 0.32 -0.32
102 AT2G37020 Translin family protein -0.63 0.32 -0.31
103 AT1G48840 Plant protein of unknown function (DUF639) 0.63 0.32 -0.31
104 AT1G09815 polymerase delta 4 polymerase delta 4 -0.63 0.33 -0.3
105 AT4G01740 Cysteine/Histidine-rich C1 domain family protein -0.63 0.32 -0.31
106 AT1G12000 Phosphofructokinase family protein -0.63 0.31 -0.34
107 AT1G04070 translocase of outer membrane 22-I ATTOM22-I, translocase of outer
membrane 22-I		 -0.63 0.32 -0.32
108 AT1G22270 Trm112p-like protein -0.63 0.32 -0.33
109 AT1G77800 PHD finger family protein 0.62 0.32 -0.32
110 AT4G00550 digalactosyl diacylglycerol deficient 2 digalactosyl diacylglycerol
deficient 2		 0.62 0.3 -0.28
111 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.62 0.33 -0.33
112 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 0.62 0.32 -0.31
113 AT1G55250 histone mono-ubiquitination 2 histone mono-ubiquitination 2 0.61 0.33 -0.32
114 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 0.6 0.34 -0.33
115 AT3G57570 ARM repeat superfamily protein 0.59 0.33 -0.33
116 AT5G58160 actin binding 0.59 0.32 -0.31
117 AT1G55250 histone mono-ubiquitination 2 histone mono-ubiquitination 2 0.58 0.3 -0.32
118 AT5G64280 dicarboxylate transporter 2.2 dicarboxylate transporter 2.2 0.58 0.33 -0.31
119 AT1G28570 SGNH hydrolase-type esterase superfamily protein 0.57 0.3 -0.3
120 AT2G46690 SAUR-like auxin-responsive protein family 0.57 0.32 -0.32
121 AT5G02030 POX (plant homeobox) family protein BEL1-LIKE HOMEODOMAIN 9,
BELLRINGER, HB-6, LARSON,
PENNYWISE, REPLUMLESS, VAAMANA		 0.57 0.33 -0.33
122 AT1G32360 Zinc finger (CCCH-type) family protein 0.57 0.31 -0.31
123 AT3G17920 Outer arm dynein light chain 1 protein 0.57 0.32 -0.32
124 AT3G56440 homolog of yeast autophagy 18 (ATG18) D homolog of yeast autophagy 18
(ATG18) D, homolog of yeast
autophagy 18 (ATG18) D		 0.56 0.3 -0.32
125 AT1G63430 Leucine-rich repeat protein kinase family protein 0.56 0.31 -0.33
126 AT1G63740 Disease resistance protein (TIR-NBS-LRR class) family 0.55 0.32 -0.3