AT1G72550 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G72550
Description tRNA synthetase beta subunit family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G72550 tRNA synthetase beta subunit family protein 1 0.33 -0.3
2 AT5G47210 Hyaluronan / mRNA binding family 0.84 0.31 -0.33
3 AT1G27400 Ribosomal protein L22p/L17e family protein 0.82 0.32 -0.3
4 AT1G09830 Glycinamide ribonucleotide (GAR) synthetase 0.82 0.31 -0.33
5 AT3G22230 Ribosomal L27e protein family 0.81 0.31 -0.32
6 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.8 0.34 -0.32
7 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.8 0.3 -0.34
8 AT1G71260 WHIRLY 2 WHIRLY 2, WHIRLY 2 0.8 0.31 -0.32
9 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.8 0.33 -0.32
10 AT1G50920 Nucleolar GTP-binding protein 0.8 0.31 -0.3
11 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.8 0.3 -0.3
12 AT1G11320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: C globular stage, F mature embryo stage,
petal differentiation and expansion stage, E expanded
cotyledon stage, D bilateral stage; Has 46 Blast hits to 46
proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.8 0.33 -0.31
13 AT3G16080 Zinc-binding ribosomal protein family protein 0.8 0.32 -0.33
14 AT3G10250 Plant protein 1589 of unknown function -0.79 0.32 -0.3
15 AT1G19920 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS2, ATP SULFURYLASE ARABIDOPSIS
1		 0.79 0.31 -0.31
16 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.79 0.3 -0.29
17 AT3G01610 cell division cycle 48C cell division cycle 48C, embryo
defective 1354		 0.78 0.33 -0.31
18 AT5G66250 kinectin-related -0.78 0.33 -0.33
19 AT2G35040 AICARFT/IMPCHase bienzyme family protein 0.78 0.31 -0.32
20 AT5G53620 unknown protein; INVOLVED IN: biological_process unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; Has 28929 Blast hits to 19542 proteins in
1425 species: Archae - 211; Bacteria - 3079; Metazoa -
14558; Fungi - 2157; Plants - 966; Viruses - 80; Other
Eukaryotes - 7878 (source: NCBI BLink).		 0.77 0.34 -0.3
21 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.77 0.27 -0.31
22 AT2G24120 DNA/RNA polymerases superfamily protein PIGMENT DEFECTIVE 319, SCABRA 3 0.77 0.32 -0.31
23 AT5G42050 DCD (Development and Cell Death) domain protein -0.77 0.31 -0.34
24 AT5G27440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: shoot apex, shoot, flower, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, E expanded cotyledon stage; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.77 0.3 -0.31
25 AT1G21690 ATPase family associated with various cellular activities
(AAA) 		embryo defective 1968, replication
factor C 4		 0.77 0.32 -0.31
26 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 0.77 0.32 -0.31
27 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.76 0.31 -0.32
28 AT2G38560 transcript elongation factor IIS REDUCED DORMANCY 2, transcript
elongation factor IIS		 0.76 0.33 -0.31
29 AT5G23070 Thymidine kinase 0.76 0.33 -0.32
30 AT2G17800 Arabidopsis RAC-like 1 Arabidopsis RAC-like 1, ATGP2,
ATRAC1, ATROP3, RHO-RELATED
GTPASES FROM PLANTS 3		 0.76 0.31 -0.3
31 AT4G24175 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0307
(InterPro:IPR006839); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.76 0.32 -0.32
32 AT3G12520 sulfate transporter 4;2 sulfate transporter 4;2 -0.75 0.3 -0.32
33 AT3G24830 Ribosomal protein L13 family protein 0.75 0.31 -0.33
34 AT1G45110 Tetrapyrrole (Corrin/Porphyrin) Methylases 0.75 0.33 -0.31
35 AT3G21110 purin 7 ATPURC, purin 7, PURIN C 0.75 0.34 -0.33
36 AT2G46270 G-box binding factor 3 G-box binding factor 3 -0.75 0.31 -0.3
37 AT5G38895 RING/U-box superfamily protein -0.75 0.33 -0.32
38 AT5G48180 nitrile specifier protein 5 nitrile specifier protein 5 -0.75 0.33 -0.32
39 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 0.75 0.33 -0.29
40 AT3G14900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: embryo development; LOCATED IN: chloroplast;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13
growth stages; Has 17135 Blast hits to 10204 proteins in
644 species: Archae - 47; Bacteria - 1684; Metazoa - 5536;
Fungi - 2506; Plants - 1043; Viruses - 361; Other
Eukaryotes - 5958 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3120 0.75 0.32 -0.3
41 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.75 0.32 -0.3
42 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 0.74 0.31 -0.33
43 AT5G49560 Putative methyltransferase family protein 0.74 0.31 -0.33
44 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.33 -0.32
45 AT5G61530 small G protein family protein / RhoGAP family protein -0.73 0.31 -0.33
46 AT4G11570 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.73 0.28 -0.34
47 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.72 0.31 -0.3
48 AT5G40670 PQ-loop repeat family protein / transmembrane family
protein		 -0.71 0.32 -0.29
49 AT5G58740 HSP20-like chaperones superfamily protein -0.71 0.32 -0.33
50 AT5G66730 C2H2-like zinc finger protein ENHYDROUS, INDETERMINATE DOMAIN 1 -0.7 0.3 -0.3
51 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.7 0.32 -0.3
52 AT1G36370 serine hydroxymethyltransferase 7 serine hydroxymethyltransferase 7 -0.69 0.3 -0.32
53 AT5G56180 actin-related protein 8 ARP8, actin-related protein 8,
actin-related protein 8		 -0.68 0.31 -0.32
54 AT1G62422 unknown protein; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.3 -0.31
55 AT5G48020 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.3 -0.33
56 AT5G63030 Thioredoxin superfamily protein glutaredoxin C1 -0.66 0.34 -0.31
57 AT5G57060 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
defense response to Gram-negative bacterium, cytolysis;
LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Channel forming colicin, C-terminal
cytotoxic (InterPro:IPR000293); BEST Arabidopsis thaliana
protein match is: Ribosomal protein L18ae family
(TAIR:AT4G26060.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.66 0.32 -0.3
58 AT1G78490 cytochrome P450, family 708, subfamily A, polypeptide 3 cytochrome P450, family 708,
subfamily A, polypeptide 3		 -0.65 0.31 -0.34
59 AT1G75280 NmrA-like negative transcriptional regulator family protein -0.65 0.33 -0.32