AT1G71460 : -
Query Information
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AGICode AT1G71460
Description Pentatricopeptide repeat (PPR-like) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G71460 Pentatricopeptide repeat (PPR-like) superfamily protein 1 0.31 -0.3
2 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.85 0.32 -0.33
3 AT5G14050 Transducin/WD40 repeat-like superfamily protein 0.84 0.33 -0.31
4 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.83 0.31 -0.32
5 AT2G47990 transducin family protein / WD-40 repeat family protein EMBRYO SAC DEVELOPMENT ARREST 13,
EMBRYO SAC DEVELOPMENT ARREST 19,
SLOW WALKER1		 0.83 0.31 -0.29
6 AT2G29760 Tetratricopeptide repeat (TPR)-like superfamily protein ORGANELLE TRANSCRIPT PROCESSING 81 0.83 0.31 -0.31
7 AT4G13530 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.83 0.32 -0.33
8 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 0.82 0.3 -0.35
9 AT1G11320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: C globular stage, F mature embryo stage,
petal differentiation and expansion stage, E expanded
cotyledon stage, D bilateral stage; Has 46 Blast hits to 46
proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.82 0.29 -0.35
10 AT1G59990 DEA(D/H)-box RNA helicase family protein EMBRYO DEFECTIVE 3108, RNA
helicase 22		 0.81 0.29 -0.32
11 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8 0.32 -0.32
12 AT5G19820 ARM repeat superfamily protein embryo defective 2734 0.8 0.33 -0.29
13 AT3G04470 Ankyrin repeat family protein 0.8 0.3 -0.31
14 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein 0.8 0.31 -0.32
15 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 -0.8 0.32 -0.3
16 AT1G62390 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 CLUMPED CHLOROPLASTS 1, Phox2 0.8 0.32 -0.31
17 AT4G10760 mRNAadenosine methylase EMBRYO DEFECTIVE 1706,
mRNAadenosine methylase		 0.79 0.31 -0.32
18 AT1G69070 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nop14-like protein (InterPro:IPR007276); Has 69842 Blast
hits to 35213 proteins in 1572 species: Archae - 363;
Bacteria - 20593; Metazoa - 20851; Fungi - 8010; Plants -
2912; Viruses - 517; Other Eukaryotes - 16596 (source: NCBI
BLink).		 0.79 0.32 -0.29
19 AT3G54540 general control non-repressible 4 ATP-binding cassette F4, general
control non-repressible 4, general
control non-repressible 4		 0.79 0.32 -0.31
20 AT3G56150 eukaryotic translation initiation factor 3C ATEIF3C-1, ATTIF3C1, eukaryotic
translation initiation factor 3C,
EIF3C-1, TIF3C1		 0.79 0.36 -0.31
21 AT4G23540 ARM repeat superfamily protein 0.79 0.3 -0.31
22 AT5G12200 pyrimidine 2 pyrimidine 2 -0.78 0.32 -0.32
23 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.78 0.3 -0.32
24 AT5G08610 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 PIGMENT DEFECTIVE 340 0.78 0.35 -0.3
25 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.78 0.32 -0.31
26 AT1G48570 zinc finger (Ran-binding) family protein 0.78 0.32 -0.32
27 AT1G60080 3'-5'-exoribonuclease family protein 0.78 0.3 -0.31
28 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 0.78 0.31 -0.31
29 AT1G31970 DEA(D/H)-box RNA helicase family protein STRESS RESPONSE SUPPRESSOR 1 0.78 0.31 -0.3
30 AT5G60360 aleurain-like protease aleurain-like protease,
aleurain-like protease, SENESCENCE
ASSOCIATED GENE2		 -0.77 0.3 -0.32
31 AT4G12750 Homeodomain-like transcriptional regulator 0.77 0.33 -0.3
32 AT3G13150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.3 -0.32
33 AT2G25970 KH domain-containing protein 0.77 0.33 -0.32
34 AT4G39530 Tetratricopeptide repeat (TPR)-like superfamily protein 0.77 0.31 -0.31
35 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.77 0.31 -0.32
36 AT3G17970 translocon at the outer membrane of chloroplasts 64-III translocon at the outer membrane
of chloroplasts 64-III, translocon
at the outer membrane of
chloroplasts 64-III		 0.77 0.3 -0.29
37 AT5G43850 RmlC-like cupins superfamily protein ARD4, ATARD4 -0.76 0.32 -0.33
38 AT4G32520 serine hydroxymethyltransferase 3 SERINE HYDROXYMETHYLTRANSFERASE 3,
serine hydroxymethyltransferase 3		 0.76 0.3 -0.33
39 AT4G14850 Pentatricopeptide repeat (PPR) superfamily protein lovastatin insensitive 1, MEF11 0.76 0.31 -0.32
40 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 0.76 0.33 -0.29
41 AT4G31210 DNA topoisomerase, type IA, core 0.76 0.33 -0.33
42 AT5G14600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.76 0.33 -0.32
43 AT4G30700 Pentatricopeptide repeat (PPR) superfamily protein 0.76 0.32 -0.33
44 AT5G19350 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.32 -0.31
45 AT1G69950 transposable element gene 0.76 0.31 -0.33
46 AT1G47960 cell wall / vacuolar inhibitor of fructosidase 1 CELL WALL / VACUOLAR INHIBITOR OF
FRUCTOSIDASE 1, cell wall /
vacuolar inhibitor of fructosidase
1		 -0.76 0.29 -0.32
47 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 0.75 0.34 -0.31
48 AT1G20370 Pseudouridine synthase family protein 0.75 0.31 -0.34
49 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.75 0.31 -0.33
50 AT5G49530 SIN-like family protein 0.75 0.33 -0.32
51 AT1G09620 ATP binding;leucine-tRNA ligases;aminoacyl-tRNA
ligases;nucleotide binding;ATP binding;aminoacyl-tRNA
ligases		 0.75 0.31 -0.34
52 AT1G03830 guanylate-binding family protein 0.74 0.31 -0.33
53 AT4G34910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.34 -0.28
54 AT1G20230 Pentatricopeptide repeat (PPR) superfamily protein 0.74 0.32 -0.32
55 AT5G61970 signal recognition particle-related / SRP-related 0.74 0.34 -0.32
56 AT5G43960 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.74 0.34 -0.32
57 AT3G20440 Alpha amylase family protein BRANCHING ENZYME 1, EMBRYO
DEFECTIVE 2729		 0.73 0.31 -0.32
58 AT5G16040 Regulator of chromosome condensation (RCC1) family protein 0.73 0.31 -0.32
59 AT2G16400 BEL1-like homeodomain 7 BEL1-like homeodomain 7 0.73 0.34 -0.31
60 AT2G17820 histidine kinase 1 AHK1, histidine kinase 1,
histidine kinase 1		 0.73 0.32 -0.32
61 AT5G28150 Plant protein of unknown function (DUF868) 0.73 0.32 -0.31
62 AT3G25890 Integrase-type DNA-binding superfamily protein cytokinin response factor 11 0.72 0.33 -0.3
63 AT1G19450 Major facilitator superfamily protein 0.72 0.3 -0.33
64 AT4G19610 nucleotide binding;nucleic acid binding;RNA binding 0.72 0.32 -0.3
65 AT3G62310 RNA helicase family protein 0.72 0.31 -0.32
66 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 -0.72 0.29 -0.31
67 AT4G01070 UDP-Glycosyltransferase superfamily protein GT72B1, UDP-GLUCOSE-DEPENDENT
GLUCOSYLTRANSFERASE 72 B1		 -0.72 0.33 -0.3
68 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN 0.72 0.33 -0.33
69 AT5G49910 chloroplast heat shock protein 70-2 chloroplast heat shock protein
70-2, HEAT SHOCK PROTEIN 70-7		 0.72 0.33 -0.32
70 AT5G51120 polyadenylate-binding protein 1 POLYADENYLATE-BINDING PROTEIN 1,
polyadenylate-binding protein 1		 0.72 0.3 -0.33
71 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase 0.72 0.33 -0.33
72 AT3G16840 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.32 -0.33
73 AT1G24310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 2922 Blast hits to 2454
proteins in 263 species: Archae - 0; Bacteria - 57; Metazoa
- 1043; Fungi - 654; Plants - 388; Viruses - 11; Other
Eukaryotes - 769 (source: NCBI BLink).		 0.72 0.32 -0.32
74 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.33 -0.3
75 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.69 0.32 -0.35
76 AT5G65760 Serine carboxypeptidase S28 family protein -0.69 0.3 -0.3
77 AT5G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.69 0.33 -0.33
78 AT5G22460 alpha/beta-Hydrolases superfamily protein -0.68 0.3 -0.33
79 AT4G17940 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.31 -0.32
80 AT4G24400 CBL-interacting protein kinase 8 ATCIPK8, CBL-interacting protein
kinase 8, PROTEIN KINASE 11,
SNF1-RELATED PROTEIN KINASE 3.13		 -0.68 0.29 -0.31
81 AT2G22970 serine carboxypeptidase-like 11 serine carboxypeptidase-like 11 -0.66 0.29 -0.3
82 AT2G15230 lipase 1 lipase 1, lipase 1 -0.66 0.29 -0.31
83 AT4G38740 rotamase CYP 1 rotamase CYP 1 -0.66 0.32 -0.32
84 AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.32 -0.29
85 AT1G65000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38060.1); Has 49 Blast hits
to 49 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.32
86 AT5G47720 Thiolase family protein -0.65 0.33 -0.32
87 AT5G23460 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.31 -0.31
88 AT3G16990 Haem oxygenase-like, multi-helical -0.64 0.29 -0.32
89 AT1G16730 unknown protein 6 unknown protein 6 -0.64 0.3 -0.3
90 AT2G06005 FRIGIDA interacting protein 1 FRIGIDA interacting protein 1 -0.63 0.3 -0.32
91 AT1G30200 F-box family protein -0.63 0.31 -0.3
92 AT4G32960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits
to 106 proteins in 39 species: Archae - 0; Bacteria - 0;
Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.63 0.3 -0.3
93 AT2G39000 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.62 0.31 -0.32
94 AT5G28020 cysteine synthase D2 CYSTEINE SYNTHASE D2, cysteine
synthase D2		 -0.62 0.31 -0.32
95 AT1G11940 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.62 0.31 -0.34
96 AT5G24750 UDP-Glycosyltransferase superfamily protein -0.61 0.33 -0.31
97 AT5G50330 Protein kinase superfamily protein -0.61 0.32 -0.31
98 AT3G03470 cytochrome P450, family 87, subfamily A, polypeptide 9 cytochrome P450, family 87,
subfamily A, polypeptide 9		 -0.61 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
99 C0079 Digalactosyldiacylglycerol-34:5 - Digalactosyldiacylglycerol-34:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.72 0.46 -0.44 C0079