AGICode | AT1G53670 |
Description | methionine sulfoxide reductase B 1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G53670 | methionine sulfoxide reductase B 1 | ATMSRB1, methionine sulfoxide reductase B 1 |
1 | 0.29 | -0.32 | ||
2 | AT5G51020 | crumpled leaf | constitutive activator of AAA-ATPase, CRUMPLED LEAF |
0.76 | 0.3 | -0.33 | ||
3 | AT3G26310 | cytochrome P450, family 71, subfamily B, polypeptide 35 | cytochrome P450, family 71, subfamily B, polypeptide 35 |
0.75 | 0.3 | -0.3 | ||
4 | AT4G37270 | heavy metal atpase 1 | ARABIDOPSIS THALIANA HEAVY METAL ATPASE 1, heavy metal atpase 1 |
0.73 | 0.31 | -0.31 | ||
5 | AT5G12370 | exocyst complex component sec10 | exocyst complex component sec10 | 0.73 | 0.32 | -0.28 | ||
6 | AT1G05200 | glutamate receptor 3.4 | glutamate receptor 3.4, glutamate receptor 3.4, GLUR3 |
0.72 | 0.29 | -0.3 | ||
7 | AT5G61670 | Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. |
0.72 | 0.3 | -0.32 | |||
8 | AT1G68830 | STT7 homolog STN7 | STT7 homolog STN7 | 0.71 | 0.31 | -0.33 | ||
9 | AT3G05350 | Metallopeptidase M24 family protein | 0.71 | 0.31 | -0.32 | |||
10 | AT5G60600 | 4-hydroxy-3-methylbut-2-enyl diphosphate synthase | CHLOROPLAST BIOGENESIS 4, CONSTITUTIVE SUBTILISIN 3, GCPE, 4-hydroxy-3-methylbut-2-enyl diphosphate synthase, ISPG |
0.7 | 0.31 | -0.34 | ||
11 | AT2G25080 | glutathione peroxidase 1 | GLUTATHIONE PEROXIDASE 1, glutathione peroxidase 1 |
0.7 | 0.32 | -0.33 | ||
12 | AT3G18810 | Protein kinase superfamily protein | proline-rich extensin-like receptor kinase 6, proline-rich extensin-like receptor kinase 6 |
0.7 | 0.32 | -0.29 | ||
13 | AT2G35050 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
0.69 | 0.29 | -0.32 | |||
14 | ATCG00560 | photosystem II reaction center protein L | photosystem II reaction center protein L |
0.68 | 0.31 | -0.32 | ||
15 | AT1G73990 | signal peptide peptidase | signal peptide peptidase, SPPA1 | 0.68 | 0.32 | -0.34 | ||
16 | AT5G57220 | cytochrome P450, family 81, subfamily F, polypeptide 2 | cytochrome P450, family 81, subfamily F, polypeptide 2 |
-0.68 | 0.31 | -0.32 | ||
17 | AT5G58870 | FTSH protease 9 | FTSH protease 9 | 0.67 | 0.3 | -0.3 | ||
18 | AT3G63520 | carotenoid cleavage dioxygenase 1 | CAROTENOID CLEAVAGE DIOXYGENASE 1, ATNCED1, carotenoid cleavage dioxygenase 1, NCED1 |
0.66 | 0.32 | -0.32 | ||
19 | AT2G29650 | phosphate transporter 4;1 | anion transporter 1, phosphate transporter 4;1 |
0.66 | 0.3 | -0.34 | ||
20 | AT3G56140 | Protein of unknown function (DUF399 and DUF3411) | 0.66 | 0.34 | -0.32 | |||
21 | AT5G35180 | Protein of unknown function (DUF1336) | 0.66 | 0.3 | -0.33 | |||
22 | AT5G37360 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.65 | 0.32 | -0.31 | |||
23 | AT3G07590 | Small nuclear ribonucleoprotein family protein | -0.65 | 0.31 | -0.31 | |||
24 | AT3G62190 | Chaperone DnaJ-domain superfamily protein | 0.65 | 0.31 | -0.31 | |||
25 | AT2G20790 | clathrin adaptor complexes medium subunit family protein | 0.64 | 0.31 | -0.32 | |||
26 | AT1G01060 | Homeodomain-like superfamily protein | LATE ELONGATED HYPOCOTYL, LATE ELONGATED HYPOCOTYL 1 |
0.64 | 0.34 | -0.31 | ||
27 | AT2G32810 | beta galactosidase 9 | beta galactosidase 9, beta-galactosidase 9 |
0.64 | 0.31 | -0.31 | ||
28 | AT4G34040 | RING/U-box superfamily protein | 0.64 | 0.29 | -0.33 | |||
29 | AT5G14070 | Thioredoxin superfamily protein | ROXY2 | -0.64 | 0.31 | -0.32 | ||
30 | AT3G09600 | Homeodomain-like superfamily protein | LHY-CCA1-LIKE5, REVEILLE 8 | 0.64 | 0.31 | -0.33 | ||
31 | AT3G10420 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
SEEDLING PLASTID DEVELOPMENT 1 | 0.63 | 0.3 | -0.32 | ||
32 | AT3G20620 | F-box family protein-related | 0.63 | 0.31 | -0.3 | |||
33 | ATCG00580 | photosystem II reaction center protein E | photosystem II reaction center protein E |
0.63 | 0.33 | -0.34 | ||
34 | AT1G59520 | CW7 | CW7 | 0.63 | 0.32 | -0.33 | ||
35 | AT5G56270 | WRKY DNA-binding protein 2 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 2, WRKY DNA-binding protein 2 |
0.63 | 0.3 | -0.34 | ||
36 | AT1G08190 | vacuolar protein sorting 41 | ATVAM2, VACUOLAR PROTEIN SORTING 41, VAM2, vacuolar protein sorting 41, ZIGZAG SUPPRESSOR 2 |
0.63 | 0.33 | -0.31 | ||
37 | AT4G34350 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CHLOROPLAST BIOGENESIS 6, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, ISPH |
0.62 | 0.32 | -0.31 | ||
38 | AT1G54260 | winged-helix DNA-binding transcription factor family protein |
0.62 | 0.3 | -0.32 | |||
39 | AT2G03140 | alpha/beta-Hydrolases superfamily protein | 0.61 | 0.31 | -0.32 | |||
40 | AT3G54660 | glutathione reductase | ATGR2, EMB2360, glutathione reductase |
0.61 | 0.31 | -0.31 | ||
41 | ATCG00550 | photosystem II reaction center protein J | photosystem II reaction center protein J |
0.61 | 0.31 | -0.31 | ||
42 | AT2G27900 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). |
0.61 | 0.31 | -0.32 | |||
43 | AT5G50180 | Protein kinase superfamily protein | 0.6 | 0.32 | -0.33 | |||
44 | AT4G16000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G15990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.6 | 0.33 | -0.33 | |||
45 | AT5G64120 | Peroxidase superfamily protein | -0.6 | 0.32 | -0.32 | |||
46 | AT5G64090 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.6 | 0.29 | -0.31 | |||
47 | AT5G49970 | pyridoxin (pyrodoxamine) 5'-phosphate oxidase | pyridoxin (pyrodoxamine) 5'-phosphate oxidase, HOMOLOG OF YEAST PYRIDOXINE AUXOTROPHY 3, pyridoxin (pyrodoxamine) 5'-phosphate oxidase |
0.6 | 0.31 | -0.32 | ||
48 | AT5G59710 | VIRE2 interacting protein 2 | AtVIP2, VIRE2 interacting protein 2 |
0.6 | 0.31 | -0.31 | ||
49 | AT1G09420 | glucose-6-phosphate dehydrogenase 4 | glucose-6-phosphate dehydrogenase 4 |
0.6 | 0.32 | -0.31 | ||
50 | AT1G02020 | nitroreductase family protein | 0.59 | 0.32 | -0.3 | |||
51 | AT2G03730 | ACT domain repeat 5 | ACT domain repeat 5 | -0.58 | 0.32 | -0.33 | ||
52 | AT3G10810 | zinc finger (C3HC4-type RING finger) family protein | 0.58 | 0.34 | -0.33 | |||
53 | AT2G36810 | ARM repeat superfamily protein | 0.58 | 0.29 | -0.31 | |||
54 | AT1G11670 | MATE efflux family protein | -0.58 | 0.31 | -0.29 | |||
55 | AT1G39350 | transposable element gene | 0.58 | 0.29 | -0.33 | |||
56 | AT1G03850 | Glutaredoxin family protein | glutaredoxin 13, glutaredoxin 13 | -0.57 | 0.33 | -0.29 | ||
57 | AT5G02220 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.33 | -0.32 | |||
58 | AT5G55050 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.56 | 0.31 | -0.31 | |||
59 | AT1G64170 | cation/H+ exchanger 16 | cation/H+ exchanger 16, cation/H+ exchanger 16 |
-0.55 | 0.35 | -0.33 | ||
60 | AT5G40840 | Rad21/Rec8-like family protein | Sister chromatid cohesion 1 (SCC1) protein homolog 2, SYN2 |
-0.54 | 0.3 | -0.32 | ||
61 | AT4G33160 | F-box family protein | -0.53 | 0.31 | -0.32 | |||
62 | AT5G17350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.53 | 0.32 | -0.29 | |||
63 | AT5G45750 | RAB GTPase homolog A1C | RAB GTPase homolog A1C, RAB GTPase homolog A1C |
-0.53 | 0.32 | -0.33 | ||
64 | AT5G60630 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.53 | 0.3 | -0.31 | |||
65 | AT4G17490 | ethylene responsive element binding factor 6 | ethylene responsive element binding factor 6, ERF-6-6, ethylene responsive element binding factor 6 |
-0.51 | 0.32 | -0.32 | ||
66 | AT5G52830 | WRKY DNA-binding protein 27 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 27, WRKY DNA-binding protein 27 |
-0.51 | 0.3 | -0.29 | ||
67 | AT4G22020 | pseudogene, hypothetical protein, similar to uncharacterized glycine-rich protein (GI:7269047) {Arabidopsis thaliana} |
-0.5 | 0.32 | -0.3 | |||
68 | AT1G80730 | zinc-finger protein 1 | ARABIDOPSIS THALIANA ZINC-FINGER PROTEIN 1, zinc-finger protein 1 |
-0.5 | 0.33 | -0.31 | ||
69 | AT5G18070 | phosphoglucosamine mutase-related | DNA-DAMAGE-REPAIR/TOLERATION 101 | -0.5 | 0.34 | -0.31 | ||
70 | AT3G15530 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.49 | 0.3 | -0.3 | |||
71 | AT4G39230 | NmrA-like negative transcriptional regulator family protein | -0.49 | 0.29 | -0.3 | |||
72 | AT4G23810 | WRKY family transcription factor | ATWRKY53, WRKY53 | -0.48 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
73 | C0187 | Neoeriocitrin | - | - | - | -0.6 | 0.43 | -0.45 |