AT1G41797 : -
Query Information
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AGICode AT1G41797
Description transposable element gene
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G41797 transposable element gene 1 0.32 -0.32
2 AT4G07540 transposable element gene 0.76 0.31 -0.34
3 AT1G63780 Ribosomal RNA processing Brix domain protein IMP4 -0.72 0.31 -0.31
4 AT3G09090 defective in exine formation protein (DEX1) DEFECTIVE IN EXINE FORMATION 1 -0.71 0.33 -0.31
5 AT5G61940 Ubiquitin carboxyl-terminal hydrolase-related protein -0.7 0.31 -0.31
6 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.7 0.31 -0.31
7 AT1G51880 root hair specific 6 root hair specific 6 0.7 0.32 -0.33
8 AT1G56290 CwfJ-like family protein 0.69 0.33 -0.31
9 AT3G49890 unknown protein; Has 27 Blast hits to 27 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.69 0.29 -0.34
10 AT2G21470 SUMO-activating enzyme 2 SUMO-ACTIVATING ENZYME 2, EMBRYO
DEFECTIVE 2764, SUMO-activating
enzyme 2		 -0.68 0.34 -0.32
11 AT2G41530 S-formylglutathione hydrolase ARABIDOPSIS THALIANA
S-FORMYLGLUTATHIONE HYDROLASE,
S-formylglutathione hydrolase		 0.67 0.33 -0.34
12 AT3G10200 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.66 0.31 -0.34
13 AT2G20150 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.66 0.32 -0.31
14 AT1G13610 alpha/beta-Hydrolases superfamily protein 0.66 0.33 -0.32
15 AT3G44460 Basic-leucine zipper (bZIP) transcription factor family
protein		 basic leucine zipper transcription
factor 67, DPBF2		 -0.66 0.31 -0.3
16 AT4G19370 Protein of unknown function (DUF1218) -0.66 0.32 -0.29
17 AT1G61410 DNA double-strand break repair and VJ recombination XRCC4 0.65 0.34 -0.3
18 AT1G26860 transposable element gene 0.65 0.32 -0.31
19 AT2G15695 Protein of unknown function DUF829, transmembrane 53 0.65 0.31 -0.32
20 AT4G28240 Wound-responsive family protein 0.65 0.31 -0.31
21 AT2G24640 ubiquitin-specific protease 19 ubiquitin-specific protease 19 -0.65 0.3 -0.3
22 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.65 0.3 -0.32
23 AT2G05950 transposable element gene 0.65 0.3 -0.33
24 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 -0.64 0.32 -0.3
25 AT5G40360 myb domain protein 115 myb domain protein 115, myb domain
protein 115		 -0.64 0.31 -0.31
26 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 -0.63 0.31 -0.29
27 AT1G03410 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 2A6 -0.63 0.29 -0.33
28 AT3G30740 40S ribosomal protein S25 (RPS25C), pseudogene, similar to
GB:P46301 GI:1173234 40S RIBOSOMAL PROTEIN S25 from
(Lycopersicon esculentum); blastp match of 75% identity and
7.2e-09 P-value to SP|P46301|RS25_LYCES 40S ribosomal
protein S25. (Tomato) {Lycopersicon esculentum}		 0.63 0.31 -0.3
29 AT3G52140 tetratricopeptide repeat (TPR)-containing protein -0.63 0.32 -0.32
30 AT3G21660 UBX domain-containing protein 0.63 0.32 -0.3
31 AT5G43480 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.63 0.32 -0.33
32 AT2G43930 Protein kinase superfamily protein -0.63 0.32 -0.31
33 AT2G15660 AGAMOUS-like 95 AGAMOUS-like 95 -0.62 0.31 -0.33
34 AT3G25280 Major facilitator superfamily protein -0.62 0.3 -0.33
35 AT4G11730 Cation transporter/ E1-E2 ATPase family protein 0.62 0.29 -0.34
36 AT4G24580 Rho GTPase activation protein (RhoGAP) with PH domain ROP1 ENHANCER 1 0.62 0.32 -0.32
37 AT1G72960 Root hair defective 3 GTP-binding protein (RHD3) 0.62 0.31 -0.3
38 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 0.62 0.31 -0.33
39 AT2G19110 heavy metal atpase 4 ARABIDOPSIS HEAVY METAL ATPASE 4,
heavy metal atpase 4		 -0.62 0.31 -0.31
40 AT1G33280 NAC domain containing protein 15 NAC domain containing protein 15,
BEARSKIN 1, NAC domain containing
protein 15		 -0.62 0.33 -0.32
41 AT1G11940 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.62 0.32 -0.3
42 AT5G06020 Plant self-incompatibility protein S1 family 0.62 0.3 -0.31
43 AT1G68650 Uncharacterized protein family (UPF0016) -0.62 0.31 -0.32
44 AT4G39650 gamma-glutamyl transpeptidase 2 gamma-glutamyl transpeptidase 2 -0.61 0.31 -0.31
45 AT3G42690 transposable element gene -0.61 0.31 -0.32
46 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.31 -0.33
47 AT3G15355 ubiquitin-conjugating enzyme 25 PHO2 FAMILY UBIQUITIN CONJUGATION
ENZYME 1, ubiquitin-conjugating
enzyme 25		 0.61 0.3 -0.32
48 AT1G61370 S-locus lectin protein kinase family protein -0.61 0.3 -0.32
49 AT5G47360 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.31 -0.3
50 AT1G06470 Nucleotide/sugar transporter family protein -0.61 0.31 -0.32
51 AT5G61960 MEI2-like protein 1 MEI2-like protein 1, MEI2-like
protein 1		 -0.61 0.31 -0.33
52 AT5G04890 HSP20-like chaperones superfamily protein RESTRICTED TEV MOVEMENT 2 -0.61 0.31 -0.36
53 AT3G20960 cytochrome P450, family 705, subfamily A, polypeptide 33 cytochrome P450, family 705,
subfamily A, polypeptide 33		 -0.61 0.29 -0.34
54 AT2G27250 CLAVATA3 AtCLV3, CLAVATA3 0.6 0.34 -0.3
55 AT2G24920 transposable element gene 0.6 0.31 -0.31
56 AT5G13390 no exine formation 1 NO EXINE FORMATION 1 -0.6 0.31 -0.3
57 AT2G15610 Protein of unknown function (DUF1685) -0.6 0.32 -0.32
58 AT2G40220 Integrase-type DNA-binding superfamily protein ABA INSENSITIVE 4, ATABI4, GLUCOSE
INSENSITIVE 6, IMPAIRED SUCROSE
INDUCTION 3, SALOBRENO 5,
SUGAR-INSENSITIVE 5, SUCROSE
UNCOUPLED 6		 -0.6 0.33 -0.29
59 AT5G14900 helicase associated (HA2) domain-containing protein 0.6 0.31 -0.3
60 AT2G15420 myosin heavy chain-related -0.6 0.32 -0.31
61 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 -0.6 0.3 -0.32
62 AT1G32850 ubiquitin-specific protease 11 ubiquitin-specific protease 11 -0.6 0.32 -0.32
63 AT3G56890 F-box associated ubiquitination effector family protein -0.6 0.3 -0.31
64 AT2G32370 homeodomain GLABROUS 3 homeodomain GLABROUS 3 -0.6 0.31 -0.3
65 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 0.6 0.32 -0.34
66 AT4G07640 transposable element gene -0.6 0.32 -0.33
67 AT1G61070 low-molecular-weight cysteine-rich 66 low-molecular-weight cysteine-rich
66, PLANT DEFENSIN 2.4		 0.6 0.3 -0.33
68 AT3G43760 transposable element gene -0.6 0.29 -0.32
69 AT2G02515 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: central cell, embryo;
EXPRESSED DURING: C globular stage; Has 18 Blast hits to 17
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.6 0.29 -0.33
70 AT3G31920 transposable element gene -0.6 0.34 -0.35
71 AT5G54700 Ankyrin repeat family protein 0.59 0.32 -0.3
72 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 -0.59 0.33 -0.29
73 AT1G66170 RING/FYVE/PHD zinc finger superfamily protein MALE MEIOCYTE DEATH 1 -0.59 0.3 -0.32
74 AT3G56270 Plant protein of unknown function (DUF827) 0.59 0.33 -0.29
75 AT2G17580 Polynucleotide adenylyltransferase family protein -0.59 0.31 -0.32
76 AT2G37160 Transducin/WD40 repeat-like superfamily protein -0.59 0.31 -0.33
77 AT5G60870 Regulator of chromosome condensation (RCC1) family protein RCC1/UVR8/GEF-like 3 -0.59 0.33 -0.3
78 AT3G51520 diacylglycerol acyltransferase family 0.59 0.33 -0.34
79 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein -0.59 0.32 -0.33
80 AT2G34360 MATE efflux family protein -0.59 0.32 -0.33
81 AT3G43630 Vacuolar iron transporter (VIT) family protein -0.59 0.3 -0.32
82 AT3G47590 alpha/beta-Hydrolases superfamily protein 0.58 0.33 -0.35
83 AT1G64280 regulatory protein (NPR1) ARABIDOPSIS NONEXPRESSER OF PR
GENES 1, NON-INDUCIBLE IMMUNITY 1,
NONEXPRESSER OF PR GENES 1,
SALICYLIC ACID INSENSITIVE 1		 0.58 0.33 -0.33
84 AT4G36150 Disease resistance protein (TIR-NBS-LRR class) family 0.58 0.3 -0.32
85 AT4G29000 Tesmin/TSO1-like CXC domain-containing protein 0.58 0.31 -0.31
86 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 -0.58 0.3 -0.3
87 AT1G07980 nuclear factor Y, subunit C10 nuclear factor Y, subunit C10 0.58 0.31 -0.33
88 AT5G45070 phloem protein 2-A8 phloem protein 2-A8, phloem
protein 2-A8		 -0.58 0.33 -0.31
89 AT1G04080 Tetratricopeptide repeat (TPR)-like superfamily protein PRP39 -0.58 0.32 -0.3
90 AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.58 0.33 -0.32
91 AT1G47660 unknown protein; Has 5165 Blast hits to 2753 proteins in
450 species: Archae - 12; Bacteria - 1193; Metazoa - 731;
Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes
- 1931 (source: NCBI BLink).		 -0.58 0.3 -0.31
92 AT5G66820 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.58 0.32 -0.3
93 AT3G55020 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.58 0.33 -0.32
94 AT1G09940 Glutamyl-tRNA reductase family protein HEMA2 -0.58 0.31 -0.3
95 AT3G22940 F-box associated ubiquitination effector family protein 0.58 0.32 -0.34
96 AT5G02570 Histone superfamily protein -0.58 0.31 -0.33
97 AT5G19790 related to AP2 11 related to AP2 11 0.57 0.3 -0.31
98 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 -0.57 0.32 -0.34
99 AT1G63670 Protein of unknown function (DUF3741) -0.57 0.32 -0.31
100 AT5G44970 Protein with RNI-like/FBD-like domains -0.57 0.32 -0.32
101 AT4G22800 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.33 -0.32
102 AT5G56460 Protein kinase superfamily protein -0.57 0.31 -0.35
103 AT5G64110 Peroxidase superfamily protein 0.57 0.31 -0.33
104 AT1G63600 Receptor-like protein kinase-related family protein 0.57 0.31 -0.3
105 AT3G22910 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.57 0.3 -0.31
106 AT2G22410 SLOW GROWTH 1 SLOW GROWTH 1 -0.57 0.34 -0.33
107 AT4G04530 transposable element gene 0.57 0.3 -0.31
108 AT5G54260 DNA repair and meiosis protein (Mre11) ARABIDOPSIS MEIOTIC RECOMBINATION
11, MEIOTIC RECOMBINATION 11		 -0.57 0.32 -0.3
109 AT3G20190 Leucine-rich repeat protein kinase family protein 0.57 0.32 -0.3
110 AT1G13830 Carbohydrate-binding X8 domain superfamily protein -0.57 0.3 -0.34
111 AT3G47460 Structural maintenance of chromosomes (SMC) family protein ATSMC2 -0.57 0.3 -0.31
112 AT1G35513 pseudogene of isochorismate synthase-related /
isochorismate mutase-related		 -0.57 0.3 -0.32
113 AT5G30480 transposable element gene 0.56 0.31 -0.31
114 AT5G08100 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase A1 0.56 0.32 -0.34
115 AT1G53350 Disease resistance protein (CC-NBS-LRR class) family 0.56 0.36 -0.32
116 AT2G40970 Homeodomain-like superfamily protein MYBC1 0.56 0.31 -0.31
117 AT1G50750 Plant mobile domain protein family 0.56 0.31 -0.3
118 AT1G62340 PA-domain containing subtilase family protein ABNORMAL LEAF-SHAPE, ABNORMAL
LEAF-SHAPE 1		 0.55 0.32 -0.32
119 AT5G07930 MEI2 C-terminal RRM only like 2 MEI2 C-terminal RRM only like 2 0.55 0.29 -0.33
120 AT2G40860 protein kinase family protein / protein phosphatase 2C (
PP2C) family protein		 0.55 0.32 -0.31
121 AT1G36810 transposable element gene 0.55 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		0.71 0.42 -0.47 C0261
123 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.65 0.45 -0.44 C0088
124 C0073 Cysteine L-Cysteine L-Cysteine alanine biosynthesis III,
cysteine biosynthesis I,
gamma-glutamyl cycle (plant pathway),
farnesylcysteine salvage pathway,
molybdenum cofactor biosynthesis,
thiamine biosynthesis II,
cyanide detoxification II,
indole glucosinolate breakdown (insect chewing induced),
glutathione degradation,
glutathione biosynthesis,
molybdenum cofactor biosynthesis II (eukaryotes),
cyanide degradation,
homocysteine and cysteine interconversion,
methionine biosynthesis II,
tRNA charging,
gamma-glutamyl cycle,
coenzyme A biosynthesis 		0.64 0.43 -0.45 C0073
125 C0006 β-Homothreonine L-β-Homothreonine - - 0.63 0.45 -0.43
126 C0065 Cellobiose D-(+)-Cellobiose Cellobiose xyloglucan biosynthesis,
starch degradation I 		-0.62 0.29 -0.3 C0065
127 C0116 Hydroxylamine - Hydroxylamine - -0.61 0.43 -0.44 C0116