AGICode | AT1G41820 |
Description | unknown protein; Has 46 Blast hits to 46 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2; Plants - 5; Viruses - 1; Other Eukaryotes - 24 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G41820 | unknown protein; Has 46 Blast hits to 46 proteins in 21 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2; Plants - 5; Viruses - 1; Other Eukaryotes - 24 (source: NCBI BLink). |
1 | 0.32 | -0.31 | |||
2 | AT5G43710 | Glycosyl hydrolase family 47 protein | -0.65 | 0.31 | -0.32 | |||
3 | AT4G35987 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.64 | 0.31 | -0.32 | |||
4 | AT5G40820 | Ataxia telangiectasia-mutated and RAD3-related | ARABIDOPSIS THALIANA ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED, Ataxia telangiectasia-mutated and RAD3-related, ATRAD3 |
-0.63 | 0.35 | -0.3 | ||
5 | AT1G05740 | Eukaryotic protein of unknown function (DUF842) | 0.62 | 0.31 | -0.31 | |||
6 | AT2G10140 | transposable element gene | 0.6 | 0.32 | -0.33 | |||
7 | AT2G42830 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 5, SHATTERPROOF 2 | -0.6 | 0.32 | -0.32 | ||
8 | AT4G02310 | Galactose oxidase/kelch repeat superfamily protein | -0.6 | 0.31 | -0.33 | |||
9 | AT1G46912 | F-box associated ubiquitination effector family protein | -0.6 | 0.31 | -0.31 | |||
10 | AT3G24650 | AP2/B3-like transcriptional factor family protein | ABA INSENSITIVE 3, ABSCISIC ACID INSENSITIVE 3, SUGAR INSENSITIVE 10 |
-0.59 | 0.32 | -0.3 | ||
11 | AT2G26850 | F-box family protein | 0.59 | 0.31 | -0.33 | |||
12 | AT3G10540 | 3-phosphoinositide-dependent protein kinase | -0.59 | 0.3 | -0.31 | |||
13 | AT1G47680 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47700.1); Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.31 | -0.32 | |||
14 | AT1G60350 | NAC domain containing protein 24 | NAC domain containing protein 24, NAC domain containing protein 24 |
0.58 | 0.3 | -0.3 | ||
15 | AT5G15800 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 2, SEPALLATA1 | -0.58 | 0.31 | -0.32 | ||
16 | AT1G71010 | FORMS APLOID AND BINUCLEATE CELLS 1C | FORMS APLOID AND BINUCLEATE CELLS 1C |
-0.58 | 0.31 | -0.29 | ||
17 | AT1G33760 | Integrase-type DNA-binding superfamily protein | 0.58 | 0.3 | -0.31 | |||
18 | AT4G19000 | Transcription elongation factor (TFIIS) family protein | ARABIDOPSIS THALIANA IWS2 (FROM YEAST INTERACTS WITH SPT6), IWS2 |
-0.58 | 0.3 | -0.31 | ||
19 | AT3G15890 | Protein kinase superfamily protein | 0.57 | 0.31 | -0.3 | |||
20 | AT3G30846 | transposable element gene | 0.57 | 0.32 | -0.3 | |||
21 | AT2G22410 | SLOW GROWTH 1 | SLOW GROWTH 1 | -0.57 | 0.33 | -0.34 | ||
22 | AT2G04380 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.31 | -0.31 | |||
23 | AT3G43530 | transposable element gene | 0.56 | 0.31 | -0.3 | |||
24 | AT2G21990 | Protein of unknown function, DUF617 | 0.55 | 0.3 | -0.3 | |||
25 | AT4G31960 | unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.33 | -0.32 | |||
26 | AT2G47160 | HCO3- transporter family | AtBOR1, REQUIRES HIGH BORON 1 | -0.55 | 0.34 | -0.3 | ||
27 | AT3G04605 | transposable element gene | -0.55 | 0.34 | -0.32 | |||
28 | AT1G44980 | pectin methylesterase 7 | A. THALIANA PECTIN METHYLESTERASE 7, pectin methylesterase 7 |
-0.55 | 0.34 | -0.31 | ||
29 | AT2G13230 | transposable element gene | -0.55 | 0.3 | -0.31 | |||
30 | AT5G66380 | folate transporter 1 | folate transporter 1, folate transporter 1 |
-0.55 | 0.33 | -0.31 | ||
31 | AT5G57200 | ENTH/ANTH/VHS superfamily protein | -0.54 | 0.31 | -0.3 | |||
32 | AT1G04625 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.54 | 0.33 | -0.3 | |||
33 | AT2G22750 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.53 | 0.32 | -0.33 | |||
34 | AT1G03890 | RmlC-like cupins superfamily protein | -0.53 | 0.32 | -0.32 | |||
35 | AT1G76780 | HSP20-like chaperones superfamily protein | -0.53 | 0.34 | -0.3 | |||
36 | AT1G08100 | nitrate transporter 2.2 | ACH2, NITRATE TRANSPORTER 2.2, nitrate transporter 2.2, NRT2;2AT |
-0.52 | 0.32 | -0.3 | ||
37 | AT5G19720 | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain |
0.52 | 0.32 | -0.33 | |||
38 | AT2G36910 | ATP binding cassette subfamily B1 | ATP-binding cassette B1, ARABIDOPSIS THALIANA P GLYCOPROTEIN1, P-GLYCOPROTEIN 1 |
-0.52 | 0.3 | -0.33 | ||
39 | AT4G23910 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10970.4); Has 52 Blast hits to 52 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.31 | -0.32 | |||
40 | AT5G18880 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
0.52 | 0.32 | -0.3 | |||
41 | AT3G42670 | chromatin remodeling 38 | chromatin remodeling 38, CLASSY1, CLASSY 1 |
-0.51 | 0.32 | -0.31 | ||
42 | AT4G09480 | transposable element gene | 0.51 | 0.31 | -0.33 | |||
43 | AT5G66710 | Protein kinase superfamily protein | -0.51 | 0.29 | -0.29 | |||
44 | AT3G44080 | F-box family protein | 0.51 | 0.33 | -0.33 | |||
45 | AT3G42340 | transposable element gene | 0.51 | 0.29 | -0.3 | |||
46 | AT1G05450 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.51 | 0.31 | -0.32 | |||
47 | AT2G24250 | Protein of unknown function (DUF295) | -0.51 | 0.31 | -0.31 | |||
48 | AT1G62440 | leucine-rich repeat/extensin 2 | leucine-rich repeat/extensin 2 | -0.51 | 0.3 | -0.3 | ||
49 | AT2G13600 | Pentatricopeptide repeat (PPR) superfamily protein | -0.51 | 0.32 | -0.31 | |||
50 | AT1G49800 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sepal, male gametophyte, stamen; EXPRESSED DURING: 4 anthesis; Has 12 Blast hits to 12 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.51 | 0.31 | -0.32 | |||
51 | AT3G57270 | beta-1,3-glucanase 1 | beta-1,3-glucanase 1 | 0.51 | 0.3 | -0.33 | ||
52 | AT5G65830 | receptor like protein 57 | receptor like protein 57, receptor like protein 57 |
-0.5 | 0.31 | -0.31 | ||
53 | AT1G06320 | unknown protein; Has 24 Blast hits to 24 proteins in 10 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.5 | 0.31 | -0.32 | |||
54 | AT4G03090 | sequence-specific DNA binding;sequence-specific DNA binding transcription factors |
-0.5 | 0.33 | -0.31 | |||
55 | AT2G17950 | Homeodomain-like superfamily protein | PGA6, WUSCHEL, WUSCHEL 1 | 0.5 | 0.33 | -0.31 | ||
56 | AT1G64130 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.5 | 0.33 | -0.3 | |||
57 | AT3G03510 | Phototropic-responsive NPH3 family protein | -0.5 | 0.3 | -0.31 | |||
58 | AT5G01860 | C2H2 and C2HC zinc fingers superfamily protein | -0.5 | 0.33 | -0.35 | |||
59 | AT1G58390 | Disease resistance protein (CC-NBS-LRR class) family | 0.49 | 0.33 | -0.32 | |||
60 | AT2G35710 | Nucleotide-diphospho-sugar transferases superfamily protein | 0.49 | 0.32 | -0.32 | |||
61 | AT2G30730 | Protein kinase superfamily protein | 0.49 | 0.31 | -0.31 | |||
62 | AT1G63200 | Cystatin/monellin superfamily protein | -0.49 | 0.29 | -0.33 | |||
63 | AT1G68640 | bZIP transcription factor family protein | PERIANTHIA | 0.49 | 0.31 | -0.33 | ||
64 | AT1G06500 | unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.31 | -0.31 | |||
65 | AT2G41451 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.49 | 0.29 | -0.31 | |||
66 | AT3G27800 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.49 | 0.31 | -0.33 | |||
67 | AT2G03740 | late embryogenesis abundant domain-containing protein / LEA domain-containing protein |
-0.49 | 0.31 | -0.3 | |||
68 | AT2G28170 | Cation/hydrogen exchanger family protein | ATCHX7, CATION/H+ EXCHANGER 7 | -0.49 | 0.3 | -0.3 | ||
69 | AT1G14420 | Pectate lyase family protein | AT59 | 0.49 | 0.33 | -0.31 | ||
70 | AT2G11235 | transposable element gene | 0.48 | 0.32 | -0.33 | |||
71 | AT2G14930 | transposable element gene | -0.48 | 0.33 | -0.32 | |||
72 | AT1G25410 | isopentenyltransferase 6 | ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 6, isopentenyltransferase 6 |
-0.47 | 0.32 | -0.31 | ||
73 | AT1G52610 | transposable element gene | 0.47 | 0.32 | -0.32 | |||
74 | AT3G10460 | Plant self-incompatibility protein S1 family | 0.47 | 0.31 | -0.31 | |||
75 | AT5G46940 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
-0.47 | 0.31 | -0.32 | |||
76 | AT4G28140 | Integrase-type DNA-binding superfamily protein | -0.47 | 0.32 | -0.31 | |||
77 | AT1G73000 | PYR1-like 3 | PYR1-like 3, regulatory components of ABA receptor 13 |
0.47 | 0.3 | -0.31 | ||
78 | AT3G16880 | F-box and associated interaction domains-containing protein | 0.47 | 0.33 | -0.33 | |||
79 | AT3G60780 | Protein of unknown function (DUF1442) | -0.47 | 0.32 | -0.34 | |||
80 | AT1G07350 | RNA-binding (RRM/RBD/RNP motifs) family protein | serine/arginine rich-like protein 45a |
-0.47 | 0.3 | -0.33 | ||
81 | AT4G31615 | Transcriptional factor B3 family protein | 0.47 | 0.3 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
82 | C0228 | Ribose-5-phosphate | D-Ribose-5-phosphate | D-Ribose-5-phosphate | PRPP biosynthesis I, Calvin-Benson-Bassham cycle, trans-zeatin biosynthesis, pentose phosphate pathway (non-oxidative branch), pyridine nucleotide cycling (plants), Rubisco shunt, ribose degradation, pyridoxal 5'-phosphate biosynthesis II |
0.75 | 0.48 | -0.43 | ||
83 | C0145 | Maltotetraose | - | Maltotetraose | starch degradation II | -0.7 | 0.46 | -0.46 | ||
84 | C0020 | 1-Aminocyclopropane-1-carboxylic acid | - | 1-Aminocyclopropane-1-carboxylate | jasmonoyl-amino acid conjugates biosynthesis I, ethylene biosynthesis I (plants), methionine salvage pathway |
-0.55 | 0.44 | -0.45 |