AT1G36020 : -
Query Information
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AGICode AT1G36020
Description BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT1G35530.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G36020 BEST Arabidopsis thaliana protein match is: DEAD/DEAH box
RNA helicase family protein (TAIR:AT1G35530.1); Has 18
Blast hits to 18 proteins in 5 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 1 0.31 -0.3
2 AT2G15080 receptor like protein 19 receptor like protein 19, receptor
like protein 19		 0.71 0.31 -0.31
3 AT4G10810 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G24026.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.7 0.32 -0.31
4 AT2G36485 ENTH/VHS family protein -0.68 0.3 -0.3
5 AT5G11360 Interleukin-1 receptor-associated kinase 4 protein 0.67 0.27 -0.33
6 AT4G00130 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.65 0.31 -0.3
7 AT2G37975 Yos1-like protein -0.64 0.32 -0.32
8 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 0.63 0.3 -0.33
9 AT3G62170 VANGUARD 1 homolog 2 VANGUARD 1 homolog 2 0.63 0.32 -0.32
10 AT5G22730 F-box/RNI-like/FBD-like domains-containing protein -0.63 0.31 -0.33
11 AT3G57630 exostosin family protein 0.63 0.29 -0.31
12 AT4G33290 F-box and associated interaction domains-containing protein 0.62 0.31 -0.33
13 AT4G19850 lectin-related ARABIDOPSIS THALIANA PHLOEM
PROTEIN 2-A2, phloem protein 2-A2,
PP2A2		 -0.62 0.34 -0.32
14 AT3G54010 FKBP-type peptidyl-prolyl cis-trans isomerase family
protein		 DEI1, PASTICCINO 1 0.62 0.33 -0.31
15 AT1G73720 transducin family protein / WD-40 repeat family protein SUPPRESSORS OF MEC-8 AND UNC-52 1 -0.61 0.32 -0.33
16 AT1G09190 Tetratricopeptide repeat (TPR)-like superfamily protein -0.61 0.29 -0.31
17 AT1G49590 C2H2 and C2HC zinc fingers superfamily protein -0.61 0.32 -0.32
18 AT3G54510 Early-responsive to dehydration stress protein (ERD4) 0.61 0.31 -0.33
19 AT3G32000 transposable element gene -0.61 0.32 -0.32
20 AT1G30560 Major facilitator superfamily protein glycerol-3-phosphate permease 3,
glycerol-3-phosphate permease 3		 0.61 0.29 -0.32
21 AT5G22970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G60000.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.61 0.31 -0.31
22 AT3G20700 F-box associated ubiquitination effector family protein 0.61 0.31 -0.33
23 AT3G43100 transposable element gene 0.6 0.33 -0.29
24 AT3G19780 LOCATED IN: endomembrane system; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF179
(InterPro:IPR003774), Thioredoxin fold
(InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF179)
(TAIR:AT1G33780.1); Has 74 Blast hits to 72 proteins in 32
species: Archae - 0; Bacteria - 24; Metazoa - 11; Fungi -
3; Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.6 0.32 -0.3
25 AT1G28375 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: petal, leaf whorl,
sepal, flower; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.6 0.31 -0.3
26 AT1G24240 Ribosomal protein L19 family protein -0.6 0.32 -0.31
27 AT3G27930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; Has 35
Blast hits to 35 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.35 -0.31
28 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.6 0.34 -0.32
29 AT2G14835 RING/U-box superfamily protein -0.59 0.32 -0.3
30 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 -0.59 0.33 -0.33
31 AT5G37090 transposable element gene 0.59 0.3 -0.34
32 AT2G43280 Far-red impaired responsive (FAR1) family protein -0.59 0.32 -0.32
33 AT3G42460 transposable element gene 0.58 0.3 -0.32
34 AT3G50250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.31 -0.31
35 AT4G39610 Protein of unknown function, DUF617 -0.58 0.32 -0.31
36 AT5G56450 Mitochondrial substrate carrier family protein PM-ANT -0.58 0.32 -0.33
37 AT3G04150 RmlC-like cupins superfamily protein 0.58 0.33 -0.3
38 AT2G21770 cellulose synthase A9 CESA09, cellulose synthase A9 0.58 0.31 -0.33
39 AT1G80330 gibberellin 3-oxidase 4 ARABIDOPSIS THALIANA GIBBERELLIN
3-OXIDASE 4, gibberellin 3-oxidase
4		 0.57 0.31 -0.33
40 AT3G05860 MADS-box transcription factor family protein -0.57 0.32 -0.32
41 AT4G25800 Calmodulin-binding protein 0.57 0.33 -0.33
42 AT3G08900 reversibly glycosylated polypeptide 3 RGP, reversibly glycosylated
polypeptide 3		 0.57 0.32 -0.33
43 AT3G25170 ralf-like 26 ralf-like 26 0.57 0.29 -0.31
44 AT1G17730 vacuolar protein sorting 46.1 CHARGED MULTIVESICULAR BODY
PROTEIN/CHROMATIN MODIFYING
PROTEIN1B, vacuolar protein
sorting 46.1		 -0.57 0.31 -0.31
45 AT3G50050 Eukaryotic aspartyl protease family protein -0.57 0.33 -0.33
46 AT3G30750 transposable element gene -0.57 0.32 -0.35
47 AT5G10880 tRNA synthetase-related / tRNA ligase-related 0.57 0.33 -0.32
48 AT1G34140 poly(A) binding protein 1 poly(A) binding protein 1 0.57 0.29 -0.33
49 AT2G37880 Protein of unknown function, DUF617 0.57 0.29 -0.3
50 AT5G11010 Pre-mRNA cleavage complex II protein family -0.57 0.32 -0.31
51 AT4G18593 dual specificity protein phosphatase-related -0.56 0.3 -0.33
52 AT3G22350 F-box and associated interaction domains-containing protein 0.56 0.31 -0.31
53 AT5G59460 scarecrow-like transcription factor 11 (SCL11) -0.56 0.33 -0.33
54 AT3G24480 Leucine-rich repeat (LRR) family protein 0.56 0.3 -0.32
55 AT2G22630 AGAMOUS-like 17 AGAMOUS-like 17 -0.56 0.31 -0.33
56 AT4G29540 bacterial transferase hexapeptide repeat-containing protein AtLpxA, LpxA -0.56 0.32 -0.32
57 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A -0.55 0.32 -0.31
58 AT3G31940 transposable element gene 0.55 0.29 -0.33
59 AT1G66660 Protein with RING/U-box and TRAF-like domains -0.55 0.32 -0.29
60 AT1G07025 Mitochondrial substrate carrier family protein 0.55 0.29 -0.31
61 AT4G18710 Protein kinase superfamily protein SHAGGY-LIKE KINASE 21,
BRASSINOSTEROID-INSENSITIVE 2,
DWARF 12, SHAGGY-LIKE KINASE 21,
ULTRACURVATA 1		 -0.55 0.31 -0.29
62 AT4G27850 Glycine-rich protein family 0.55 0.32 -0.33
63 AT4G38590 beta-galactosidase 14 beta-galactosidase 14 0.54 0.32 -0.33
64 ATMG00890 hypothetical protein ORF106D 0.54 0.32 -0.32
65 AT5G55010 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.54 0.3 -0.35
66 AT3G12720 myb domain protein 67 myb domain protein 67, ATY53,
MYB67, myb domain protein 67		 0.54 0.3 -0.31
67 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein 0.54 0.32 -0.32
68 AT2G19410 U-box domain-containing protein kinase family protein -0.54 0.3 -0.33
69 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 0.54 0.34 -0.3
70 AT1G44510 transposable element gene -0.54 0.31 -0.3
71 AT5G22540 Plant protein of unknown function (DUF247) 0.54 0.34 -0.31
72 AT1G33060 NAC 014 NAC 014, NAC 014 -0.54 0.31 -0.33
73 AT2G27395 pseudogene of cysteine protease-related 0.54 0.32 -0.3
74 AT1G31240 Bromodomain transcription factor -0.53 0.31 -0.31
75 AT5G44140 prohibitin 7 prohibitin 7, prohibitin 7 -0.53 0.34 -0.32
76 AT5G09970 cytochrome P450, family 78, subfamily A, polypeptide 7 cytochrome P450, family 78,
subfamily A, polypeptide 7		 -0.53 0.32 -0.3
77 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.52 0.31 -0.32
78 AT5G45220 Disease resistance protein (TIR-NBS-LRR class) family -0.51 0.29 -0.31
79 AT1G76210 Arabidopsis protein of unknown function (DUF241) -0.51 0.33 -0.32
80 AT3G08800 ARM repeat superfamily protein SHORT-ROOT interacting embryonic
lethal		 -0.51 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
81 C0105 Glutathione disulfide - Glutathione disulfide sulfate reduction II (assimilatory),
selenate reduction,
glutathione redox reactions I,
ascorbate glutathione cycle,
glutathione redox reactions II 		0.77 0.49 -0.47 C0105
82 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III 0.73 0.44 -0.44 C0195
83 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		0.67 0.45 -0.46 C0015
84 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		0.65 0.45 -0.46 C0262
85 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		0.65 0.45 -0.45 C0087
86 C0027 2-Oxoglutaric acid - α-Ketoglutarate gibberellin biosynthesis III (early C-13 hydroxylation),
leucopelargonidin and leucocyanidin biosynthesis,
aspartate degradation II,
ornithine biosynthesis,
isoleucine biosynthesis I (from threonine),
pantothenate biosynthesis,
phenylalanine degradation III,
flavonol biosynthesis,
lysine biosynthesis VI,
luteolin biosynthesis,
ammonia assimilation cycle II,
serine biosynthesis,
flavonoid biosynthesis,
glutamate biosynthesis V,
aspartate biosynthesis,
glutamate degradation I,
gibberellin inactivation I (2beta-hydroxylation),
alanine degradation III,
photorespiration,
valine biosynthesis,
glycine biosynthesis,
arginine biosynthesis II (acetyl cycle),
arginine degradation I (arginase pathway),
gibberellin biosynthesis II (early C-3 hydroxylation),
leucine biosynthesis,
glutamate biosynthesis IV,
tyrosine biosynthesis II,
proline biosynthesis III,
citrulline biosynthesis,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
L-Ndelta-acetylornithine biosynthesis,
isoleucine degradation I,
alanine biosynthesis II,
tyrosine biosynthesis I,
TCA cycle variation III (eukaryotic),
leucine degradation I,
alanine degradation II (to D-lactate),
TCA cycle variation V (plant),
arginine degradation VI (arginase 2 pathway),
valine degradation I,
gibberellin biosynthesis I (non C-3, non C-13 hydroxylation),
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
2-ketoglutarate dehydrogenase complex,
glutamate degradation IV,
tyrosine degradation I,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
IAA biosynthesis I,
phenylalanine biosynthesis II,
lysine degradation II,
scopoletin biosynthesis,
4-hydroxyphenylpyruvate biosynthesis,
histidine biosynthesis,
glutamine biosynthesis III,
leucodelphinidin biosynthesis 		0.64 0.41 -0.45 C0027
87 C0113 Histidinol - Histidinol histidine biosynthesis 0.56 0.29 -0.3 C0113