AT1G73960 : TBP-associated factor 2
Query Information
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AGICode AT1G73960
Description TBP-associated factor 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G73960 TBP-associated factor 2 TBP-associated factor 2 1 0.33 -0.31
2 AT2G23940 Protein of unknown function (DUF788) -0.75 0.3 -0.33
3 AT5G35930 AMP-dependent synthetase and ligase family protein 0.71 0.32 -0.31
4 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 0.71 0.32 -0.31
5 AT5G24740 Protein of unknown function (DUF1162) 0.7 0.31 -0.32
6 AT4G08930 APR-like 6 APR-like 6, APR-like 6 -0.7 0.3 -0.3
7 AT3G43500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G42080.1); Has 8 Blast hits to
8 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.69 0.33 -0.3
8 AT3G12100 Cation efflux family protein 0.69 0.31 -0.31
9 AT1G77800 PHD finger family protein 0.67 0.33 -0.33
10 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.67 0.3 -0.32
11 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.67 0.32 -0.32
12 AT4G02460 DNA mismatch repair protein, putative POSTMEIOTIC SEGREGATION 1 0.67 0.3 -0.31
13 AT1G17760 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS THALIANA CLEAVAGE
STIMULATION FACTOR 77, CSTF77		 0.67 0.3 -0.3
14 AT2G45700 sterile alpha motif (SAM) domain-containing protein 0.67 0.32 -0.33
15 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 0.67 0.3 -0.32
16 AT5G20840 Phosphoinositide phosphatase family protein 0.67 0.31 -0.31
17 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha 0.66 0.31 -0.32
18 AT5G26760 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.66 0.28 -0.32
19 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.66 0.35 -0.31
20 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 0.66 0.31 -0.32
21 AT5G44750 DNA-directed DNA polymerases ARABIDOPSIS THALIANA HOMOLOG OF
REVERSIONLESS 1, REV1		 0.65 0.32 -0.3
22 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein 0.65 0.3 -0.34
23 AT3G19960 myosin 1 myosin 1 0.65 0.31 -0.34
24 AT1G63000 nucleotide-rhamnose synthase/epimerase-reductase nucleotide-rhamnose
synthase/epimerase-reductase,
UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-E
PIMERASE-4-REDUCTASE 1		 -0.65 0.32 -0.29
25 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.65 0.32 -0.31
26 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 0.65 0.3 -0.31
27 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.65 0.33 -0.29
28 AT1G79950 RAD3-like DNA-binding helicase protein 0.65 0.32 -0.31
29 AT3G20140 cytochrome P450, family 705, subfamily A, polypeptide 23 cytochrome P450, family 705,
subfamily A, polypeptide 23		 -0.65 0.32 -0.33
30 AT3G07900 O-fucosyltransferase family protein -0.64 0.31 -0.29
31 AT4G21430 Zinc finger, RING-type;Transcription factor
jumonji/aspartyl beta-hydroxylase		 B160 0.64 0.32 -0.31
32 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.64 0.3 -0.3
33 AT5G01270 carboxyl-terminal domain (ctd) phosphatase-like 2 ATCPL2, carboxyl-terminal domain
(ctd) phosphatase-like 2		 0.64 0.3 -0.31
34 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein 0.64 0.31 -0.31
35 AT4G14510 CRM family member 3B ATCFM3B, CRM family member 3B 0.64 0.32 -0.31
36 AT5G60100 pseudo-response regulator 3 pseudo-response regulator 3,
pseudo-response regulator 3		 0.64 0.3 -0.31
37 AT1G71940 SNARE associated Golgi protein family -0.64 0.3 -0.32
38 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 0.64 0.32 -0.32
39 AT1G04950 TATA BOX ASSOCIATED FACTOR II 59 ATTAF6, EMBRYO DEFECTIVE 2781,
TBP-associated factor 6, TATA BOX
ASSOCIATED FACTOR II 59		 0.64 0.31 -0.32
40 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 0.63 0.32 -0.31
41 AT5G48340 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.63 0.32 -0.3
42 AT3G13225 WW domain-containing protein 0.63 0.31 -0.32
43 AT1G33980 Smg-4/UPF3 family protein ATUPF3, UPF3 0.63 0.29 -0.3
44 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.63 0.32 -0.31
45 AT2G28240 ATP-dependent helicase family protein 0.63 0.32 -0.32
46 AT5G04050 RNA-directed DNA polymerase (reverse transcriptase) 0.63 0.32 -0.31
47 AT5G20170 RNA polymerase II transcription mediators 0.63 0.28 -0.3
48 AT3G56600 Protein kinase superfamily protein -0.62 0.31 -0.31
49 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 0.62 0.31 -0.34
50 AT3G61390 RING/U-box superfamily protein 0.62 0.32 -0.29
51 AT5G46300 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.33 -0.32
52 AT1G76880 Duplicated homeodomain-like superfamily protein 0.62 0.31 -0.31
53 AT4G18130 phytochrome E phytochrome E 0.62 0.32 -0.3
54 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 0.62 0.32 -0.31
55 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 0.62 0.33 -0.31
56 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 0.61 0.29 -0.31
57 AT3G05020 acyl carrier protein 1 ACYL CARRIER PROTEIN, acyl carrier
protein 1		 -0.61 0.33 -0.29
58 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 0.61 0.31 -0.34
59 AT5G02740 Ribosomal protein S24e family protein -0.61 0.3 -0.32
60 AT2G40630 Uncharacterised conserved protein (UCP030365) 0.6 0.32 -0.29
61 AT1G30010 Intron maturase, type II family protein 0.6 0.3 -0.32
62 AT3G24070 Zinc knuckle (CCHC-type) family protein 0.6 0.33 -0.33
63 AT1G57650 ATP binding 0.6 0.34 -0.35
64 AT1G17260 autoinhibited H(+)-ATPase isoform 10 autoinhibited H(+)-ATPase isoform
10		 0.6 0.3 -0.33
65 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3		 -0.6 0.33 -0.3
66 AT3G13410 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G55546.1); Has 49 Blast hits to 49 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.6 0.32 -0.31
67 AT4G27270 Quinone reductase family protein -0.6 0.3 -0.32
68 AT5G22760 PHD finger family protein 0.6 0.32 -0.31
69 AT2G40070 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.6 0.32 -0.3
70 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.6 0.34 -0.31
71 AT3G51160 NAD(P)-binding Rossmann-fold superfamily protein GDP-D-MANNOSE-4,6-DEHYDRATASE 2,
MURUS 1, MURUS 1		 -0.59 0.29 -0.3
72 AT3G56720 unknown protein; Has 6239 Blast hits to 4635 proteins in
365 species: Archae - 6; Bacteria - 230; Metazoa - 3389;
Fungi - 659; Plants - 656; Viruses - 13; Other Eukaryotes -
1286 (source: NCBI BLink).		 0.59 0.31 -0.33
73 AT3G54130 Josephin family protein -0.59 0.33 -0.3
74 AT1G17580 myosin 1 ARABIDOPSIS MYOSIN 1, myosin 1,
MYOSIN XI 1		 0.59 0.32 -0.33
75 AT3G08890 Protein of unknown function, DUF538 -0.59 0.34 -0.32
76 AT4G35987 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.59 0.31 -0.32
77 AT5G35710 transposable element gene -0.59 0.33 -0.33
78 AT1G40230 transposable element gene 0.59 0.32 -0.33
79 AT4G21730 pseudogene of N-ethylmaleimide sensitive factor (NSF) 0.59 0.32 -0.3
80 AT1G15100 RING-H2 finger A2A RING-H2 finger A2A -0.58 0.34 -0.3
81 AT4G24680 modifier of snc1 MODIFIER OF snc1 0.58 0.34 -0.34
82 AT3G05890 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2B -0.58 0.31 -0.32
83 AT4G17330 G2484-1 protein G2484-1 protein, G2484-1 protein 0.58 0.31 -0.3
84 AT5G54090 DNA mismatch repair protein MutS, type 2 0.58 0.31 -0.32
85 AT3G13190 Plant protein of unknown function (DUF827) 0.58 0.32 -0.33
86 AT4G33360 NAD(P)-binding Rossmann-fold superfamily protein farnesol dehydrogenase -0.58 0.34 -0.32
87 AT4G34330 Protein of unknown function (DUF677) 0.57 0.31 -0.34
88 AT1G77860 Rhomboid-related intramembrane serine protease family
protein		 KOMPEITO 0.57 0.32 -0.32
89 AT4G32010 HSI2-like 1 HSI2-L1, HSI2-like 1,
VP1/ABI3-LIKE 2		 0.57 0.3 -0.29
90 AT2G24840 AGAMOUS-like 61 AGAMOUS-like 61, DIANA -0.57 0.31 -0.32
91 AT1G66680 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AR401 -0.57 0.32 -0.32
92 AT1G67720 Leucine-rich repeat protein kinase family protein 0.57 0.33 -0.31
93 AT1G74630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.57 0.31 -0.32
94 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.57 0.31 -0.3
95 AT1G50430 Ergosterol biosynthesis ERG4/ERG24 family DELTA5,7-STEROL DELTA7 REDUCTASE,
DWARF 5, LEPIDA, PARVA, STEROL
DELTA7 REDUCTASE		 -0.57 0.31 -0.32
96 AT3G16110 PDI-like 1-6 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 4, PDI-like
1-6, PROTEIN DISULFIDE ISOMERASE
4, PDI-like 1-6		 -0.57 0.32 -0.31
97 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 -0.56 0.32 -0.32
98 AT3G51910 heat shock transcription factor A7A ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A7A, heat
shock transcription factor A7A		 -0.56 0.32 -0.31
99 AT5G19930 Protein of unknown function DUF92, transmembrane -0.56 0.3 -0.34
100 AT3G28380 P-glycoprotein 17 ATP-binding cassette B17,
P-glycoprotein 17		 -0.55 0.32 -0.31
101 AT3G21680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root, flower,
stamen; EXPRESSED DURING: 4 anthesis, petal differentiation
and expansion stage; Has 34 Blast hits to 34 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.31 -0.32
102 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 -0.55 0.32 -0.32
103 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 -0.55 0.3 -0.33
104 AT3G06090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower, leaf, seed;
EXPRESSED DURING: petal differentiation and expansion
stage, LP.08 eight leaves visible, E expanded cotyledon
stage; Has 7 Blast hits to 7 proteins in 2 species: Archae
- 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.31 -0.34
105 AT2G14550 pseudogene, putative pre-mRNA splicing factor,
non-consensus splice donor TA at exon 5; blastp match of
67% identity and 1.1e-68 P-value to
GP|28374170|gb|AAH45264.1||BC045264 Similar to splicing
factor 3b, subunit 4, 49kD {Xenopus laevis}		 -0.54 0.33 -0.32
106 AT3G15250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G53163.1); Has 409 Blast hits
to 218 proteins in 63 species: Archae - 0; Bacteria - 22;
Metazoa - 178; Fungi - 77; Plants - 38; Viruses - 1; Other
Eukaryotes - 93 (source: NCBI BLink).		 -0.54 0.31 -0.3
107 AT4G16840 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G35658.3); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.54 0.32 -0.33
108 AT5G05760 syntaxin of plants 31 ATSED5, ATSYP31, T-SNARE SED 5,
syntaxin of plants 31		 -0.54 0.31 -0.3
109 AT4G30440 UDP-D-glucuronate 4-epimerase 1 UDP-D-glucuronate 4-epimerase 1 -0.54 0.3 -0.33
110 AT2G02510 NADH dehydrogenase (ubiquinone)s -0.53 0.3 -0.31
111 AT1G32840 transposable element gene -0.53 0.34 -0.3
112 AT4G11210 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.52 0.33 -0.33
113 AT2G04460 transposable element gene -0.52 0.3 -0.28
114 AT4G07890 transposable element gene -0.52 0.32 -0.32
115 AT3G04680 CLP-similar protein 3 CLP-similar protein 3 -0.52 0.31 -0.31
116 AT1G22460 O-fucosyltransferase family protein -0.52 0.3 -0.31
117 AT3G50180 Plant protein of unknown function (DUF247) -0.51 0.33 -0.31