AGICode | AT1G73940 |
Description | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G73940 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.29 | -0.32 | |||
2 | AT1G14620 | decoy | DECOY | 0.82 | 0.3 | -0.33 | ||
3 | AT2G21045 | Rhodanese/Cell cycle control phosphatase superfamily protein |
0.82 | 0.33 | -0.31 | |||
4 | AT1G26740 | Ribosomal L32p protein family | 0.81 | 0.31 | -0.3 | |||
5 | AT2G18400 | ribosomal protein L6 family protein | 0.8 | 0.31 | -0.31 | |||
6 | AT2G35605 | SWIB/MDM2 domain superfamily protein | 0.8 | 0.32 | -0.32 | |||
7 | AT3G14600 | Ribosomal protein L18ae/LX family protein | 0.78 | 0.3 | -0.34 | |||
8 | AT5G11340 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | 0.78 | 0.33 | -0.33 | |||
9 | AT3G10090 | Nucleic acid-binding, OB-fold-like protein | 0.78 | 0.32 | -0.31 | |||
10 | AT1G16000 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.78 | 0.31 | -0.31 | |||
11 | AT5G23290 | prefoldin 5 | prefoldin 5 | 0.78 | 0.32 | -0.29 | ||
12 | AT2G30050 | transducin family protein / WD-40 repeat family protein | 0.78 | 0.29 | -0.32 | |||
13 | AT5G49010 | DNA replication protein-related | EMBRYO DEFECTIVE 2812, SYNTHETIC LETHALITY WITH DPB11-1 5 |
0.78 | 0.33 | -0.29 | ||
14 | AT1G70350 | unknown protein; Has 98 Blast hits to 98 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.77 | 0.31 | -0.32 | |||
15 | AT3G22380 | time for coffee | TIME FOR COFFEE | -0.77 | 0.32 | -0.3 | ||
16 | AT2G29540 | RNApolymerase 14 kDa subunit | ATRPAC14, RNApolymerase 14 kDa subunit, RNApolymerase 14 kDa subunit |
0.76 | 0.32 | -0.32 | ||
17 | AT5G02050 | Mitochondrial glycoprotein family protein | 0.76 | 0.32 | -0.32 | |||
18 | AT4G35850 | Pentatricopeptide repeat (PPR) superfamily protein | 0.76 | 0.32 | -0.31 | |||
19 | AT5G55940 | Uncharacterised protein family (UPF0172) | embryo defective 2731 | 0.76 | 0.33 | -0.33 | ||
20 | AT3G57550 | guanylate kinase | guanylate kinase, GUANYLATE KINAS 2 |
0.76 | 0.33 | -0.32 | ||
21 | AT1G13670 | unknown protein; Has 22 Blast hits to 22 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.76 | 0.35 | -0.32 | |||
22 | AT3G16940 | calmodulin binding;transcription regulators | -0.75 | 0.3 | -0.32 | |||
23 | AT2G44065 | Ribosomal protein L2 family | 0.75 | 0.31 | -0.31 | |||
24 | AT1G74030 | enolase 1 | enolase 1 | 0.75 | 0.34 | -0.31 | ||
25 | AT3G01790 | Ribosomal protein L13 family protein | 0.75 | 0.35 | -0.32 | |||
26 | AT4G37660 | Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein |
0.75 | 0.3 | -0.33 | |||
27 | AT4G36420 | Ribosomal protein L12 family protein | 0.74 | 0.3 | -0.33 | |||
28 | AT5G16470 | zinc finger (C2H2 type) family protein | 0.74 | 0.33 | -0.3 | |||
29 | AT3G13040 | myb-like HTH transcriptional regulator family protein | -0.74 | 0.3 | -0.32 | |||
30 | AT2G30060 | Pleckstrin homology (PH) domain superfamily protein | 0.74 | 0.34 | -0.31 | |||
31 | AT5G64100 | Peroxidase superfamily protein | 0.74 | 0.32 | -0.33 | |||
32 | AT4G29430 | ribosomal protein S15A E | ribosomal protein S15A E | 0.73 | 0.31 | -0.3 | ||
33 | AT4G08460 | Protein of unknown function (DUF1644) | 0.73 | 0.31 | -0.29 | |||
34 | AT2G44270 | repressor of lrx1 | repressor of lrx1 | 0.73 | 0.33 | -0.33 | ||
35 | AT1G02900 | rapid alkalinization factor 1 | RAPID ALKALINIZATION FACTOR 1, rapid alkalinization factor 1, RALF-LIKE 1 |
0.73 | 0.3 | -0.31 | ||
36 | AT5G54900 | RNA-binding protein 45A | RNA-binding protein 45A, RNA-binding protein 45A |
0.73 | 0.31 | -0.3 | ||
37 | AT2G44790 | uclacyanin 2 | uclacyanin 2 | 0.73 | 0.32 | -0.3 | ||
38 | AT4G30930 | Ribosomal protein L21 | NUCLEAR FUSION DEFECTIVE 1 | 0.73 | 0.3 | -0.33 | ||
39 | AT4G14760 | kinase interacting (KIP1-like) family protein | -0.73 | 0.33 | -0.32 | |||
40 | AT2G29530 | Tim10/DDP family zinc finger protein | TIM10 | 0.72 | 0.31 | -0.31 | ||
41 | AT1G14040 | EXS (ERD1/XPR1/SYG1) family protein | 0.72 | 0.34 | -0.29 | |||
42 | AT3G04230 | Ribosomal protein S5 domain 2-like superfamily protein | 0.72 | 0.3 | -0.35 | |||
43 | AT5G56940 | Ribosomal protein S16 family protein | 0.72 | 0.32 | -0.32 | |||
44 | AT5G39600 | CONTAINS InterPro DOMAIN/s: Ribosomal protein L53, mitochondrial (InterPro:IPR019716); Has 50 Blast hits to 50 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.72 | 0.29 | -0.29 | |||
45 | AT2G22475 | GRAM domain family protein | GL2-EXPRESSION MODULATOR | 0.72 | 0.31 | -0.31 | ||
46 | AT4G27270 | Quinone reductase family protein | 0.72 | 0.31 | -0.3 | |||
47 | AT2G35120 | Single hybrid motif superfamily protein | 0.72 | 0.33 | -0.31 | |||
48 | AT3G05030 | sodium hydrogen exchanger 2 | ATNHX2, sodium hydrogen exchanger 2 |
-0.71 | 0.31 | -0.32 | ||
49 | AT3G03620 | MATE efflux family protein | -0.71 | 0.33 | -0.31 | |||
50 | AT5G66280 | GDP-D-mannose 4,6-dehydratase 1 | GDP-D-mannose 4,6-dehydratase 1 | 0.71 | 0.31 | -0.31 | ||
51 | AT5G03650 | starch branching enzyme 2.2 | starch branching enzyme 2.2 | -0.71 | 0.31 | -0.3 | ||
52 | AT5G62000 | auxin response factor 2 | ARF1-BINDING PROTEIN, auxin response factor 2, HLS1 SUPPRESSOR, ORESARA 14 |
-0.71 | 0.32 | -0.31 | ||
53 | AT3G15357 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, hypocotyl, root, leaf; Has 6931 Blast hits to 2036 proteins in 230 species: Archae - 7; Bacteria - 933; Metazoa - 1824; Fungi - 836; Plants - 482; Viruses - 218; Other Eukaryotes - 2631 (source: NCBI BLink). |
0.71 | 0.31 | -0.29 | |||
54 | AT1G54160 | nuclear factor Y, subunit A5 | nuclear factor Y, subunit A5, NUCLEAR FACTOR Y A5 |
-0.71 | 0.32 | -0.3 | ||
55 | AT5G20820 | SAUR-like auxin-responsive protein family | 0.71 | 0.32 | -0.32 | |||
56 | AT1G07830 | ribosomal protein L29 family protein | 0.7 | 0.3 | -0.31 | |||
57 | AT3G13580 | Ribosomal protein L30/L7 family protein | 0.7 | 0.3 | -0.31 | |||
58 | AT5G40200 | DegP protease 9 | DegP protease 9 | 0.7 | 0.34 | -0.32 | ||
59 | AT4G11240 | Calcineurin-like metallo-phosphoesterase superfamily protein |
TOPP7 | 0.7 | 0.3 | -0.32 | ||
60 | AT5G61810 | Mitochondrial substrate carrier family protein | ATP/phosphate carrier 1 | -0.7 | 0.31 | -0.31 | ||
61 | AT5G12410 | THUMP domain-containing protein | 0.7 | 0.3 | -0.3 | |||
62 | AT4G22720 | Actin-like ATPase superfamily protein | 0.7 | 0.31 | -0.31 | |||
63 | AT1G14210 | Ribonuclease T2 family protein | 0.7 | 0.33 | -0.3 | |||
64 | AT2G19990 | pathogenesis-related protein-1-like | pathogenesis-related protein-1-like |
0.69 | 0.31 | -0.31 | ||
65 | AT4G35050 | Transducin family protein / WD-40 repeat family protein | MULTICOPY SUPPRESSOR OF IRA1 3, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3 |
0.69 | 0.32 | -0.33 | ||
66 | AT5G43060 | Granulin repeat cysteine protease family protein | 0.69 | 0.31 | -0.3 | |||
67 | AT5G64650 | Ribosomal protein L17 family protein | 0.69 | 0.31 | -0.3 | |||
68 | AT1G07410 | RAB GTPase homolog A2B | ARABIDOPSIS RAB GTPASE HOMOLOG A2B, RAB GTPase homolog A2B, RAB GTPASE HOMOLOG A2B, RAB GTPase homolog A2B |
0.69 | 0.3 | -0.33 | ||
69 | AT4G15700 | Thioredoxin superfamily protein | 0.69 | 0.3 | -0.33 | |||
70 | AT2G34900 | Transcription factor GTE6 | GTE01, GLOBAL TRANSCRIPTION FACTOR GROUP E1, IMBIBITION-INDUCIBLE 1 |
0.69 | 0.32 | -0.33 | ||
71 | AT2G34050 | INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304 Blast hits to 304 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). |
0.69 | 0.29 | -0.29 | |||
72 | AT5G63400 | adenylate kinase 1 | adenylate kinase 1 | 0.69 | 0.34 | -0.33 | ||
73 | AT1G49860 | glutathione S-transferase (class phi) 14 | glutathione S-transferase (class phi) 14, glutathione S-transferase (class phi) 14 |
0.69 | 0.3 | -0.32 | ||
74 | AT1G28410 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT4G31340.2); Has 425 Blast hits to 402 proteins in 77 species: Archae - 4; Bacteria - 22; Metazoa - 249; Fungi - 4; Plants - 98; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink). |
0.69 | 0.33 | -0.31 | |||
75 | AT4G04750 | Major facilitator superfamily protein | -0.68 | 0.35 | -0.3 | |||
76 | AT5G66320 | GATA transcription factor 5 | GATA transcription factor 5 | -0.68 | 0.31 | -0.32 | ||
77 | AT1G68570 | Major facilitator superfamily protein | -0.68 | 0.32 | -0.32 | |||
78 | AT5G57610 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
-0.68 | 0.31 | -0.31 | |||
79 | AT5G02620 | ankyrin-like1 | ankyrin-like1, ATANK1 | -0.67 | 0.3 | -0.31 | ||
80 | AT3G50380 | Protein of unknown function (DUF1162) | -0.66 | 0.3 | -0.32 | |||
81 | AT3G56050 | Protein kinase family protein | -0.66 | 0.31 | -0.31 | |||
82 | AT1G70900 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23110.4); Has 57 Blast hits to 57 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.66 | 0.3 | -0.31 | |||
83 | AT1G21580 | Zinc finger C-x8-C-x5-C-x3-H type family protein | -0.66 | 0.31 | -0.3 | |||
84 | AT3G22430 | CONTAINS InterPro DOMAIN/s: Domain of unknown function XS (InterPro:IPR005380); BEST Arabidopsis thaliana protein match is: XS domain-containing protein / XS zinc finger domain-containing protein-related (TAIR:AT5G23570.1); Has 565 Blast hits to 510 proteins in 121 species: Archae - 2; Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51; Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink). |
-0.65 | 0.31 | -0.31 | |||
85 | AT1G77800 | PHD finger family protein | -0.65 | 0.33 | -0.31 | |||
86 | AT1G72650 | TRF-like 6 | TRF-like 6 | -0.65 | 0.32 | -0.32 | ||
87 | AT5G20840 | Phosphoinositide phosphatase family protein | -0.65 | 0.31 | -0.35 | |||
88 | AT4G18270 | translocase 11 | ARABIDOPSIS THALIANA TRANSLOCASE 11, translocase 11 |
-0.65 | 0.33 | -0.32 | ||
89 | AT5G67030 | zeaxanthin epoxidase (ZEP) (ABA1) | ABA DEFICIENT 1, ARABIDOPSIS THALIANA ABA DEFICIENT 1, ARABIDOPSIS THALIANA ZEAXANTHIN EPOXIDASE, IMPAIRED IN BABA-INDUCED STERILITY 3, LOW EXPRESSION OF OSMOTIC STRESS-RESPONSIVE GENES 6, NON-PHOTOCHEMICAL QUENCHING 2, ZEAXANTHIN EPOXIDASE |
-0.65 | 0.3 | -0.33 | ||
90 | AT1G55460 | DNA/RNA-binding protein Kin17, conserved region | -0.64 | 0.3 | -0.29 | |||
91 | AT2G21590 | Glucose-1-phosphate adenylyltransferase family protein | APL4 | -0.64 | 0.3 | -0.32 | ||
92 | AT5G62130 | Per1-like family protein | -0.64 | 0.33 | -0.32 | |||
93 | AT1G28230 | purine permease 1 | ATPUP1, purine permease 1 | -0.64 | 0.32 | -0.31 | ||
94 | AT1G17440 | Transcription initiation factor TFIID subunit A | CYTOKININ-HYPERSENSITIVE 1, ENHANCED ETHYLENE RESPONSE 4, TBP-ASSOCIATED FACTOR 12B |
-0.64 | 0.31 | -0.32 | ||
95 | AT5G58160 | actin binding | -0.64 | 0.31 | -0.32 | |||
96 | AT1G55970 | histone acetyltransferase of the CBP family 4 | HAC04, histone acetyltransferase of the CBP family 4, HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 6, HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 04, HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 4 |
-0.64 | 0.3 | -0.31 | ||
97 | AT1G21590 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
-0.64 | 0.34 | -0.3 | |||
98 | AT3G08020 | PHD finger family protein | -0.64 | 0.31 | -0.32 | |||
99 | AT5G37180 | sucrose synthase 5 | ARABIDOPSIS THALIANA SUCROSE SYNTHASE 5, sucrose synthase 5 |
-0.63 | 0.32 | -0.32 | ||
100 | ATCG00530 | CemA-like proton extrusion protein-related | YCF10 | -0.63 | 0.28 | -0.31 | ||
101 | AT1G29080 | Papain family cysteine protease | -0.63 | 0.31 | -0.31 | |||
102 | AT4G10180 | light-mediated development protein 1 / deetiolated1 (DET1) | ATDET1, DE-ETIOLATED 1, FUSCA 2 | -0.63 | 0.3 | -0.32 | ||
103 | AT2G28420 | Lactoylglutathione lyase / glyoxalase I family protein | glyoxylase I 8 | -0.63 | 0.29 | -0.33 | ||
104 | AT1G09510 | NAD(P)-binding Rossmann-fold superfamily protein | -0.63 | 0.31 | -0.32 | |||
105 | AT3G15350 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.62 | 0.3 | -0.33 | |||
106 | AT1G24706 | THO2 | AtTHO2, EMBRYO DEFECTIVE 2793, THO2 |
-0.62 | 0.31 | -0.34 | ||
107 | AT1G76580 | Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein |
-0.62 | 0.29 | -0.32 | |||
108 | AT2G43800 | Actin-binding FH2 (formin homology 2) family protein | -0.62 | 0.32 | -0.32 | |||
109 | AT3G26730 | RING/U-box superfamily protein | -0.61 | 0.32 | -0.31 | |||
110 | AT2G28810 | Dof-type zinc finger DNA-binding family protein | -0.61 | 0.33 | -0.31 | |||
111 | AT3G08850 | HEAT repeat ;WD domain, G-beta repeat protein protein | ATRAPTOR1B, RAPTOR1, RAPTOR1B | -0.61 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
112 | C0123 | Isoleucine | D,L-Isoleucine | L-Isoleucine | tRNA charging, isoleucine biosynthesis I (from threonine), jasmonoyl-amino acid conjugates biosynthesis I, isoleucine degradation I |
-0.85 | 0.42 | -0.43 | ||
113 | C0111 | Hexa-2-O-glycerol-β-galactopyranoside | Hexa-2-O-gllycerol-β-D-galactopyranoside | - | - | -0.82 | 0.43 | -0.45 | ||
114 | C0017 | sn-Glycero-3-phosphocholine | sn-Glycero-3-phosphocholine | L-1-Glycero-3-phosphocholine | - | -0.79 | 0.4 | -0.46 | ||
115 | C0057 | Anthranilic acid | - | Anthranilate | tryptophan biosynthesis, benzoylanthranilate biosynthesis |
-0.79 | 0.45 | -0.45 | ||
116 | C0258 | Tryptophan amide (NH3+) | D,L-Tryptophan amide (NH3+) | - | - | -0.77 | 0.45 | -0.45 | ||
117 | C0109 | Guanine | - | Guanine | guanine and guanosine salvage II, guanosine nucleotides degradation II |
-0.77 | 0.45 | -0.45 |