AT1G72440 : embryo sac development arrest 25
Query Information
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AGICode AT1G72440
Description CCAAT-binding factor
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G72440 CCAAT-binding factor embryo sac development arrest 25,
SLOW WALKER2		 1 0.34 -0.31
2 AT5G57990 ubiquitin-specific protease 23 ubiquitin-specific protease 23 0.87 0.31 -0.3
3 AT1G80750 Ribosomal protein L30/L7 family protein 0.86 0.34 -0.32
4 AT1G48920 nucleolin like 1 nucleolin like 1, nucleolin like
1, PARALLEL 1		 0.86 0.31 -0.31
5 AT4G05410 Transducin/WD40 repeat-like superfamily protein YAOZHE 0.86 0.32 -0.31
6 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 0.85 0.35 -0.31
7 AT4G25730 FtsJ-like methyltransferase family protein 0.84 0.32 -0.31
8 AT4G29510 arginine methyltransferase 11 ARABIDOPSIS THALIANA ARGININE
METHYLTRANSFERASE 11, ARABIDOPSIS
THALIANA PROTEIN ARGININE
METHYLTRANSFERASE 1B, arginine
methyltransferase 11, PROTEIN
ARGININE METHYLTRANSFERASE 1B		 0.84 0.34 -0.33
9 AT4G02400 U3 ribonucleoprotein (Utp) family protein 0.83 0.32 -0.31
10 AT3G07050 GTP-binding family protein nucleostemin-like 1 0.82 0.3 -0.32
11 AT2G25970 KH domain-containing protein 0.82 0.33 -0.31
12 AT2G18900 Transducin/WD40 repeat-like superfamily protein 0.82 0.31 -0.33
13 AT3G22660 rRNA processing protein-related 0.82 0.32 -0.31
14 AT1G18850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 40 Blast hits to 40 proteins
in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.82 0.36 -0.32
15 AT3G10530 Transducin/WD40 repeat-like superfamily protein 0.81 0.31 -0.33
16 AT5G14050 Transducin/WD40 repeat-like superfamily protein 0.81 0.31 -0.29
17 AT4G38710 glycine-rich protein 0.81 0.31 -0.31
18 AT5G61020 evolutionarily conserved C-terminal region 3 evolutionarily conserved
C-terminal region 3		 0.81 0.33 -0.3
19 AT1G79150 binding 0.81 0.31 -0.3
20 AT5G54910 DEA(D/H)-box RNA helicase family protein 0.8 0.32 -0.32
21 AT4G26600 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.8 0.35 -0.32
22 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.8 0.31 -0.31
23 AT1G16280 RNA helicase 36 Arabidopsis thaliana RNA helicase
36, RNA helicase 36, SLOW WALKER 3		 0.8 0.31 -0.32
24 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.8 0.34 -0.3
25 AT5G22320 Leucine-rich repeat (LRR) family protein 0.8 0.32 -0.31
26 AT1G75200 flavodoxin family protein / radical SAM domain-containing
protein		 0.8 0.32 -0.3
27 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.79 0.31 -0.32
28 AT5G59980 Polymerase/histidinol phosphatase-like 0.79 0.33 -0.32
29 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.79 0.32 -0.3
30 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 0.79 0.3 -0.32
31 AT1G42440 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948),
Protein of unknown function DUF663 (InterPro:IPR007034);
BEST Arabidopsis thaliana protein match is: P-loop
containing nucleoside triphosphate hydrolases superfamily
protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088
proteins in 291 species: Archae - 2; Bacteria - 131;
Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49;
Other Eukaryotes - 905 (source: NCBI BLink).		 0.79 0.31 -0.32
32 AT1G03530 nuclear assembly factor 1 ATNAF1, nuclear assembly factor 1 0.78 0.32 -0.31
33 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 0.78 0.31 -0.31
34 AT1G29900 carbamoyl phosphate synthetase B carbamoyl phosphate synthetase B,
VENOSA 3		 0.78 0.32 -0.31
35 AT2G46030 ubiquitin-conjugating enzyme 6 ubiquitin-conjugating enzyme 6 -0.78 0.31 -0.33
36 AT2G34357 ARM repeat superfamily protein 0.78 0.33 -0.3
37 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.78 0.31 -0.32
38 AT1G54380 spliceosome protein-related 0.78 0.31 -0.32
39 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.78 0.32 -0.31
40 AT2G24050 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G2		 0.78 0.31 -0.3
41 AT1G79490 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2217 0.78 0.31 -0.31
42 AT1G30240 FUNCTIONS IN: binding; INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold
(InterPro:IPR016024); Has 165 Blast hits to 164 proteins in
73 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi -
68; Plants - 46; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.78 0.31 -0.28
43 AT1G06670 nuclear DEIH-boxhelicase nuclear DEIH-boxhelicase 0.78 0.33 -0.34
44 AT5G06110 DnaJ domain ;Myb-like DNA-binding domain 0.78 0.3 -0.32
45 AT5G46330 Leucine-rich receptor-like protein kinase family protein FLAGELLIN-SENSITIVE 2 0.77 0.33 -0.31
46 AT1G06380 Ribosomal protein L1p/L10e family 0.77 0.32 -0.34
47 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 0.77 0.3 -0.31
48 AT5G16800 Acyl-CoA N-acyltransferases (NAT) superfamily protein -0.77 0.34 -0.33
49 AT3G21540 transducin family protein / WD-40 repeat family protein 0.77 0.33 -0.31
50 AT5G52380 VASCULAR-RELATED NAC-DOMAIN 6 0.76 0.32 -0.31
51 AT5G05210 Surfeit locus protein 6 0.76 0.33 -0.31
52 AT3G02760 Class II aaRS and biotin synthetases superfamily protein 0.76 0.32 -0.3
53 AT1G71850 Ubiquitin carboxyl-terminal hydrolase family protein 0.76 0.31 -0.32
54 AT1G06720 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.32 -0.31
55 AT3G06780 glycine-rich protein -0.76 0.31 -0.32
56 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 0.76 0.28 -0.29
57 AT2G36070 translocase inner membrane subunit 44-2 translocase inner membrane subunit
44-2, translocase inner membrane
subunit 44-2		 0.75 0.34 -0.33
58 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein 0.75 0.34 -0.32
59 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 0.75 0.32 -0.32
60 AT5G01230 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.74 0.32 -0.31
61 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 0.74 0.29 -0.33
62 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.74 0.32 -0.31
63 AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein ARABIDOPSIS EARLY CHLOROPLAST
BIOGENESIS2, EARLY CHLOROPLAST
BIOGENESIS2, VANILLA CREAM 1		 0.73 0.31 -0.3
64 AT1G26670 Vesicle transport v-SNARE family protein ATVTI12, VESICAL TRANSPORT V-SNARE
12, VTI1B		 -0.73 0.34 -0.32
65 AT2G34970 Trimeric LpxA-like enzyme 0.73 0.32 -0.31
66 AT1G51380 DEA(D/H)-box RNA helicase family protein 0.73 0.32 -0.3
67 AT1G62040 Ubiquitin-like superfamily protein autophagy 8c -0.71 0.3 -0.32
68 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.7 0.32 -0.31
69 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.68 0.32 -0.3
70 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.3 -0.31
71 AT3G02340 RING/U-box superfamily protein -0.67 0.34 -0.3
72 AT5G62570 Calmodulin binding protein-like -0.67 0.32 -0.32
73 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.67 0.31 -0.31
74 AT2G05590 TLD-domain containing nucleolar protein -0.66 0.31 -0.34
75 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.66 0.34 -0.32
76 AT4G26160 atypical CYS HIS rich thioredoxin 1 atypical CYS HIS rich thioredoxin
1		 -0.66 0.3 -0.34
77 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 -0.65 0.3 -0.31
78 AT1G37000 Beta-galactosidase related protein -0.65 0.32 -0.32
79 AT1G44790 ChaC-like family protein -0.65 0.35 -0.31
80 AT4G20380 LSD1 zinc finger family protein LESION SIMULATING DISEASE -0.65 0.31 -0.31
81 AT3G02290 RING/U-box superfamily protein -0.64 0.34 -0.31
82 AT3G19580 zinc-finger protein 2 zinc-finger protein 2, zinc-finger
protein 2		 -0.64 0.32 -0.3
83 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.64 0.33 -0.31
84 AT5G13740 zinc induced facilitator 1 zinc induced facilitator 1 -0.64 0.32 -0.32
85 AT2G34470 urease accessory protein G PSKF109, urease accessory protein
G		 -0.63 0.34 -0.33
86 AT3G59530 Calcium-dependent phosphotriesterase superfamily protein LESS ADHERENT POLLEN 3 -0.63 0.32 -0.31
87 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.63 0.31 -0.33
88 AT5G57190 phosphatidylserine decarboxylase 2 phosphatidylserine decarboxylase 2 -0.62 0.29 -0.32
89 AT5G19070 SNARE associated Golgi protein family -0.62 0.34 -0.3
90 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E -0.62 0.32 -0.3
91 AT1G78790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2008
(InterPro:IPR018552); Has 27 Blast hits to 27 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.33 -0.33
92 AT4G39190 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits
to 3562 proteins in 401 species: Archae - 12; Bacteria -
497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses -
22; Other Eukaryotes - 3119 (source: NCBI BLink).		 -0.61 0.32 -0.32
93 AT4G10770 oligopeptide transporter 7 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 7, oligopeptide
transporter 7		 -0.6 0.3 -0.33
94 AT2G22740 SU(VAR)3-9 homolog 6 SET DOMAIN PROTEIN 23, SU(VAR)3-9
homolog 6		 -0.6 0.32 -0.31
95 AT3G50750 BES1/BZR1 homolog 1 BES1/BZR1 homolog 1 -0.59 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
96 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.59 0.33 -0.31 C0142