AT1G10950 : AtTMN1

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AGICode	AT1G10950
Description	transmembrane nine 1

Gene information

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	Gene Code	Description / Information	Gene name	Correlation				link
	Gene Code	Description / Information	Gene name	pcc	2.5%	97.5%	PPI	link
1	AT1G10950	transmembrane nine 1	AtTMN1, transmembrane nine 1	1	0.3	-0.31
2	AT3G43630	Vacuolar iron transporter (VIT) family protein		0.83	0.3	-0.33
3	AT4G21150	ribophorin II (RPN2) family protein	HAPLESS 6	0.8	0.32	-0.33
4	AT1G26460	Tetratricopeptide repeat (TPR)-like superfamily protein		0.8	0.33	-0.3
5	AT4G31160	DDB1-CUL4 associated factor 1	DDB1-CUL4 associated factor 1	0.78	0.3	-0.31
6	AT3G04605	transposable element gene		0.78	0.31	-0.3
7	AT1G29880	glycyl-tRNA synthetase / glycine--tRNA ligase		0.76	0.3	-0.29
8	AT5G61970	signal recognition particle-related / SRP-related		0.75	0.32	-0.31
9	AT2G48160	Tudor/PWWP/MBT domain-containing protein		0.75	0.32	-0.32
10	AT3G28720	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in 85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi - 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732 (source: NCBI BLink).		0.74	0.32	-0.3
11	AT3G50590	Transducin/WD40 repeat-like superfamily protein		0.73	0.33	-0.3
12	AT4G38200	SEC7-like guanine nucleotide exchange family protein		0.73	0.32	-0.33
13	AT3G59020	ARM repeat superfamily protein		0.73	0.31	-0.3
14	AT1G49040	stomatal cytokinesis defective / SCD1 protein (SCD1)	STOMATAL CYTOKINESIS-DEFECTIVE 1	0.73	0.3	-0.31
15	AT1G12620	Pentatricopeptide repeat (PPR) superfamily protein		0.72	0.3	-0.3
16	AT2G40720	Tetratricopeptide repeat (TPR)-like superfamily protein		0.72	0.31	-0.33
17	AT5G60040	nuclear RNA polymerase C1	nuclear RNA polymerase C1	0.72	0.31	-0.29
18	AT4G28400	Protein phosphatase 2C family protein		-0.72	0.33	-0.31
19	AT1G15870	Mitochondrial glycoprotein family protein		0.71	0.29	-0.32
20	AT1G55930	CBS domain-containing protein / transporter associated domain-containing protein		0.71	0.33	-0.32
21	AT1G56690	Pentatricopeptide repeat (PPR) superfamily protein		0.71	0.3	-0.3
22	AT5G36950	DegP protease 10	DegP protease 10	0.71	0.32	-0.33
23	AT4G07540	transposable element gene		-0.71	0.33	-0.34
24	AT2G38960	endoplasmic reticulum oxidoreductins 2	endoplasmic reticulum oxidoreductins 2, endoplasmic reticulum oxidoreductins 2	0.7	0.31	-0.33
25	AT3G08960	ARM repeat superfamily protein		0.7	0.32	-0.32
26	AT4G16780	homeobox protein 2	homeobox protein 2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2, HAT4, homeobox protein 2	-0.7	0.3	-0.31
27	AT5G01310	APRATAXIN-like	APRATAXIN-like	0.7	0.32	-0.3
28	AT1G23640	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana protein match is: Domain of unknown function DUF220 (TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.7	0.31	-0.34
29	AT3G62360	Carbohydrate-binding-like fold		0.69	0.32	-0.31
30	AT5G14950	golgi alpha-mannosidase II	ATGMII, golgi alpha-mannosidase II	0.69	0.33	-0.3
31	AT5G09330	NAC domain containing protein 82	NAC domain containing protein 82, NAC domain containing protein 82, VND-interacting 1	0.69	0.31	-0.31
32	AT1G26110	decapping 5	decapping 5	0.69	0.31	-0.29
33	AT1G62940	acyl-CoA synthetase 5	acyl-CoA synthetase 5	0.69	0.31	-0.3
34	AT1G05750	Tetratricopeptide repeat (TPR)-like superfamily protein	CLB19, pigment defective 247	0.69	0.32	-0.31
35	AT1G74820	RmlC-like cupins superfamily protein		0.69	0.32	-0.34
36	AT4G32180	pantothenate kinase 2	pantothenate kinase 2, pantothenate kinase 2	0.69	0.32	-0.33
37	AT5G53480	ARM repeat superfamily protein		0.69	0.31	-0.3
38	AT3G51880	high mobility group B1	AtHMGB1, high mobility group B1, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D1	-0.69	0.33	-0.33
39	AT1G05550	Protein of unknown function (DUF295)		0.68	0.31	-0.32
40	AT3G09090	defective in exine formation protein (DEX1)	DEFECTIVE IN EXINE FORMATION 1	0.68	0.33	-0.31
41	AT1G73240	CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.68	0.3	-0.3
42	AT2G38650	galacturonosyltransferase 7	galacturonosyltransferase 7, LIKE GLYCOSYL TRANSFERASE 7	0.68	0.32	-0.31
43	AT2G05120	Nucleoporin, Nup133/Nup155-like		0.68	0.31	-0.3
44	AT5G17020	exportin 1A	ATCRM1, ARABIDOPSIS THALIANA EXPORTIN 1, HEAT-INTOLERANT 2, EXPORTIN 1, exportin 1A	0.68	0.35	-0.33
45	AT5G58270	ABC transporter of the mitochondrion 3	ATP-binding cassette B25, ARABIDOPSIS THALIANA ABC TRANSPORTER OF THE MITOCHONDRION 3, ABC transporter of the mitochondrion 3, STARIK 1	0.68	0.34	-0.32
46	AT2G22410	SLOW GROWTH 1	SLOW GROWTH 1	0.68	0.3	-0.32
47	AT5G17140	Cysteine proteinases superfamily protein		0.68	0.31	-0.3
48	AT3G17430	Nucleotide-sugar transporter family protein		0.68	0.32	-0.31
49	AT5G10810	enhancer of rudimentary protein, putative	ARABIDOPSIS THALIANA ENHANCER OF RUDIMENTARY HOMOLOGUE, ENHANCER OF RUDIMENTARY HOMOLOGUE	-0.68	0.29	-0.32
50	AT4G35890	winged-helix DNA-binding transcription factor family protein		0.67	0.3	-0.33
51	AT2G02560	cullin-associated and neddylation dissociated	CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED 1, cullin-associated and neddylation dissociated, ETA2, HEMIVENATA, TIP120	0.67	0.31	-0.3
52	AT1G50740	Transmembrane proteins 14C		-0.67	0.3	-0.34
53	AT2G33530	serine carboxypeptidase-like 46	serine carboxypeptidase-like 46	-0.67	0.31	-0.33
54	AT2G19110	heavy metal atpase 4	ARABIDOPSIS HEAVY METAL ATPASE 4, heavy metal atpase 4	0.67	0.31	-0.3
55	AT5G47620	RNA-binding (RRM/RBD/RNP motifs) family protein		0.67	0.31	-0.32
56	AT1G48180	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits to 39 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.67	0.32	-0.34
57	AT5G13560	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink).		0.66	0.34	-0.31
58	AT1G17470	developmentally regulated G-protein 1	ATDRG, developmentally regulated G-protein 1, developmentally regulated G-protein 1	0.66	0.33	-0.31
59	AT3G04740	RNA polymerase II transcription mediators	ARABIDOPSIS MEDIATOR COMPONENTS 14, MEDIATOR COMPONENTS 14, STRUWWELPETER	0.66	0.32	-0.31
60	AT5G35700	fimbrin-like protein 2	fimbrin-like protein 2, FIMBRIN5	0.66	0.29	-0.33
61	AT5G61140	U5 small nuclear ribonucleoprotein helicase		0.66	0.31	-0.3
62	AT3G57650	lysophosphatidyl acyltransferase 2	lysophosphatidyl acyltransferase 2	0.66	0.31	-0.32
63	AT4G15570	P-loop containing nucleoside triphosphate hydrolases superfamily protein	MAGATAMA 3	0.66	0.31	-0.31
64	AT2G32730	26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit		0.66	0.31	-0.32
65	AT5G26120	alpha-L-arabinofuranosidase 2	alpha-L-arabinofuranosidase 2, ARABIDOPSIS THALIANA ALPHA-L-ARABINOFURANOSIDASE 2	-0.66	0.3	-0.29
66	AT5G50390	Pentatricopeptide repeat (PPR-like) superfamily protein	EMBRYO DEFECTIVE 3141	0.66	0.32	-0.33
67	AT1G72960	Root hair defective 3 GTP-binding protein (RHD3)		-0.66	0.33	-0.33
68	AT1G53510	mitogen-activated protein kinase 18	ARABIDOPSIS THALIANA MAP KINASE 18, mitogen-activated protein kinase 18	0.66	0.32	-0.32
69	AT5G49260	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		0.66	0.3	-0.31
70	AT3G56630	cytochrome P450, family 94, subfamily D, polypeptide 2	cytochrome P450, family 94, subfamily D, polypeptide 2	0.66	0.33	-0.32
71	AT5G06480	Immunoglobulin E-set superfamily protein		-0.65	0.29	-0.33
72	AT4G26000	RNA-binding KH domain-containing protein	PEPPER	0.65	0.32	-0.32
73	AT5G43710	Glycosyl hydrolase family 47 protein		0.65	0.31	-0.3
74	AT2G36480	ENTH/VHS family protein		0.65	0.3	-0.33
75	AT2G07360	SH3 domain-containing protein		0.65	0.32	-0.34
76	AT4G34850	Chalcone and stilbene synthase family protein	LESS ADHESIVE POLLEN 5	0.65	0.33	-0.31
77	AT1G80070	Pre-mRNA-processing-splicing factor	EMBRYO DEFECTIVE 14, EMBRYO DEFECTIVE 177, EMBRYO DEFECTIVE 33, ABNORMAL SUSPENSOR 2	0.65	0.31	-0.32
78	AT1G17040	SH2 domain protein A	ARABIDOPSIS THALIANA SH2 DOMAIN PROTEIN A, SH2 domain protein A, STAT-TYPE LINKER-SH2 DOMAIN FACTOR A	-0.65	0.3	-0.3
79	AT2G20190	CLIP-associated protein	CLIP-ASSOCIATED PROTEIN, CLIP-associated protein	0.65	0.32	-0.31
80	AT5G62610	basic helix-loop-helix (bHLH) DNA-binding superfamily protein		-0.65	0.34	-0.31
81	AT4G34500	Protein kinase superfamily protein		-0.64	0.34	-0.33
82	AT1G67370	DNA-binding HORMA family protein	ASYNAPTIC 1, ATASY1	-0.64	0.32	-0.33
83	AT1G76020	Thioredoxin superfamily protein		-0.64	0.3	-0.33
84	AT2G37160	Transducin/WD40 repeat-like superfamily protein		0.64	0.32	-0.31
85	AT4G15200	formin 3	formin 3, formin 3	-0.64	0.31	-0.33
86	AT5G53480	ARM repeat superfamily protein		0.64	0.3	-0.32
87	AT1G50470	F-box associated ubiquitination effector family protein		0.64	0.31	-0.3
88	AT1G17720	Protein phosphatase 2A, regulatory subunit PR55	ATB BETA	0.64	0.31	-0.33
89	AT2G36630	Sulfite exporter TauE/SafE family protein		0.64	0.31	-0.31
90	AT1G35220	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).		0.64	0.34	-0.31
91	AT3G13130	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		-0.64	0.3	-0.31
92	AT1G43810	unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		0.64	0.31	-0.3
93	AT1G75430	BEL1-like homeodomain 11	BEL1-like homeodomain 11	0.64	0.31	-0.29
94	AT1G17630	Pentatricopeptide repeat (PPR-like) superfamily protein		0.64	0.3	-0.31
95	AT5G06020	Plant self-incompatibility protein S1 family		-0.63	0.3	-0.3
96	AT1G12680	phosphoenolpyruvate carboxylase-related kinase 2	phosphoenolpyruvate carboxylase-related kinase 2	-0.63	0.3	-0.33
97	AT1G51700	DOF zinc finger protein 1	DOF zinc finger protein 1, DOF zinc finger protein 1	-0.63	0.32	-0.3
98	AT1G51880	root hair specific 6	root hair specific 6	-0.62	0.32	-0.31
99	AT4G23180	cysteine-rich RLK (RECEPTOR-like protein kinase) 10	cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4	-0.62	0.31	-0.31
100	AT2G15520	transposable element gene		-0.61	0.35	-0.33
101	AT1G60350	NAC domain containing protein 24	NAC domain containing protein 24, NAC domain containing protein 24	-0.61	0.35	-0.31
102	AT1G17790	DNA-binding bromodomain-containing protein		-0.61	0.32	-0.32
103	AT3G20190	Leucine-rich repeat protein kinase family protein		-0.61	0.29	-0.29
104	AT2G05950	transposable element gene		-0.61	0.34	-0.32
105	AT3G24360	ATP-dependent caseinolytic (Clp) protease/crotonase family protein		-0.6	0.31	-0.32
106	AT2G21970	stress enhanced protein 2	stress enhanced protein 2	-0.6	0.32	-0.31
107	AT5G64800	CLAVATA3/ESR-RELATED 21	CLAVATA3/ESR-RELATED 21	-0.6	0.3	-0.33
108	AT3G19790	unknown protein; Has 32 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2; Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).		-0.6	0.3	-0.34
109	AT5G44880	transposable element gene		-0.6	0.31	-0.31
110	AT2G29050	RHOMBOID-like 1	RHOMBOID-like 1, RHOMBOID-like 1	-0.6	0.31	-0.31
111	AT5G44070	phytochelatin synthase 1 (PCS1)	ARA8, ARABIDOPSIS THALIANA PHYTOCHELATIN SYNTHASE 1, CADMIUM SENSITIVE 1, PHYTOCHELATIN SYNTHASE 1	-0.6	0.3	-0.33
112	AT5G40440	mitogen-activated protein kinase kinase 3	mitogen-activated protein kinase kinase 3, mitogen-activated protein kinase kinase 3	-0.59	0.31	-0.31
113	AT5G37970	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein		-0.59	0.31	-0.34
114	AT1G21065	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink).		-0.59	0.3	-0.3
115	AT2G46600	Calcium-binding EF-hand family protein		-0.58	0.3	-0.32
116	AT2G09840	BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding (TAIR:AT2G06904.1); Has 10 Blast hits to 10 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.58	0.29	-0.33
117	AT5G51320	transposable element gene		-0.58	0.33	-0.31
118	AT5G08100	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	asparaginase A1	-0.58	0.31	-0.32
119	AT2G39060	Nodulin MtN3 family protein	AtSWEET9, SWEET9	-0.58	0.3	-0.31
120	AT3G20550	SMAD/FHA domain-containing protein	DAWDLE	-0.58	0.31	-0.31
121	AT3G04800	translocase inner membrane subunit 23-3	translocase inner membrane subunit 23-3, translocase inner membrane subunit 23-3	-0.58	0.32	-0.29
122	AT5G07710	Polynucleotidyl transferase, ribonuclease H-like superfamily protein		-0.58	0.33	-0.3
123	AT2G15042	Leucine-rich repeat (LRR) family protein		-0.57	0.31	-0.31
124	AT2G10465	transposable element gene		-0.57	0.31	-0.31
125	AT1G64290	F-box protein-related		-0.57	0.32	-0.3
126	AT2G19000	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.57	0.3	-0.34
127	AT2G20620	Protein of unknown function (DUF626)		-0.57	0.34	-0.32
128	AT5G59660	Leucine-rich repeat protein kinase family protein		-0.57	0.33	-0.31
129	AT1G22510	RING/U-box protein with domain of unknown function (DUF 1232)		-0.57	0.3	-0.31
130	AT3G09735	S1FA-like DNA-binding protein		-0.57	0.32	-0.34
131	AT3G49070	Protein of unknown function (DUF677)		-0.57	0.32	-0.32
132	AT2G01150	RING-H2 finger protein 2B	RING-H2 finger protein 2B	-0.57	0.32	-0.33
133	AT1G47810	F-box and associated interaction domains-containing protein		-0.57	0.32	-0.32
134	AT3G48090	alpha/beta-Hydrolases superfamily protein	ATEDS1, enhanced disease susceptibility 1	-0.56	0.32	-0.33
135	AT5G60470	C2H2 and C2HC zinc fingers superfamily protein		-0.56	0.31	-0.3
136	AT3G32090	WRKY family transcription factor		-0.56	0.31	-0.32
137	AT1G52560	HSP20-like chaperones superfamily protein		-0.56	0.32	-0.31
138	AT3G43420	unknown protein; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		-0.56	0.29	-0.33
139	AT5G22600	FBD / Leucine Rich Repeat domains containing protein		-0.56	0.32	-0.31
140	AT1G29860	WRKY DNA-binding protein 71	WRKY DNA-BINDING PROTEIN 71, WRKY DNA-binding protein 71	-0.56	0.32	-0.31
141	AT1G69630	F-box/RNI-like superfamily protein		-0.56	0.32	-0.34
142	AT5G61280	Remorin family protein		-0.56	0.33	-0.31
143	AT4G04470	Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein	PMP22	-0.56	0.33	-0.31

Metabolite information

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	CID	Metabolite name			Pathway Information	Correlation				link
	CID	Compound name	Stereochemistry	Aracyc name	Pathway Information	pcc	2.5%	97.5%	PPI	link
144	C0213	PR_MST_2410.2	-	-	-	0.71	0.42	-0.45
145	C0045	7-Methylthio-n-heptylglucosinolate	-	7-Methylthioheptyl glucosinolate	glucosinolate biosynthesis from pentahomomethionine	0.64	0.33	-0.32
146	C0214	PR_MST_2412.1	-	-	-	0.64	0.46	-0.44
147	C0015	p-Coumaric acid	-	4-Coumarate	scopoletin biosynthesis, free phenylpropanoid acid biosynthesis, phenylpropanoid biosynthesis, simple coumarins biosynthesis, 4-hydroxybenzoate biosynthesis V, suberin biosynthesis, phenylpropanoid biosynthesis, initial reactions, flavonoid biosynthesis	-0.58	0.44	-0.41

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