AGICode | AT1G51510 |
Description | RNA-binding (RRM/RBD/RNP motifs) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G51510 | RNA-binding (RRM/RBD/RNP motifs) family protein | Y14 | 1 | 0.29 | -0.3 | ||
2 | AT1G04480 | Ribosomal protein L14p/L23e family protein | 0.88 | 0.32 | -0.33 | |||
3 | AT2G46230 | PIN domain-like family protein | 0.88 | 0.32 | -0.33 | |||
4 | AT2G31410 | unknown protein; Has 1719 Blast hits to 1091 proteins in 184 species: Archae - 5; Bacteria - 24; Metazoa - 559; Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes - 769 (source: NCBI BLink). |
0.88 | 0.32 | -0.33 | |||
5 | AT1G65650 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 | UCH2 | 0.87 | 0.31 | -0.32 | ||
6 | AT3G05560 | Ribosomal L22e protein family | 0.87 | 0.3 | -0.3 | |||
7 | AT1G08580 | unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.87 | 0.31 | -0.32 | |||
8 | AT5G58230 | Transducin/WD40 repeat-like superfamily protein | ARABIDOPSIS MULTICOPY SUPRESSOR OF IRA1, MATERNAL EFFECT EMBRYO ARREST 70, MULTICOPY SUPRESSOR OF IRA1 |
0.87 | 0.33 | -0.3 | ||
9 | AT1G44835 | YbaK/aminoacyl-tRNA synthetase-associated domain | 0.87 | 0.34 | -0.33 | |||
10 | AT2G44860 | Ribosomal protein L24e family protein | 0.87 | 0.31 | -0.32 | |||
11 | AT5G27470 | seryl-tRNA synthetase / serine--tRNA ligase | 0.87 | 0.3 | -0.32 | |||
12 | AT1G22270 | Trm112p-like protein | 0.86 | 0.31 | -0.31 | |||
13 | AT4G30220 | small nuclear ribonucleoprotein F | small nuclear ribonucleoprotein F | 0.85 | 0.34 | -0.31 | ||
14 | AT1G13870 | calmodulin binding;purine nucleotide binding | AtKTI12, DEFORMED ROOTS AND LEAVES 1 |
0.85 | 0.32 | -0.29 | ||
15 | AT3G07170 | Sterile alpha motif (SAM) domain-containing protein | 0.85 | 0.31 | -0.31 | |||
16 | AT5G03300 | adenosine kinase 2 | adenosine kinase 2 | 0.85 | 0.32 | -0.28 | ||
17 | AT3G18165 | modifier of snc1,4 | Modifier of snc1,4 | 0.85 | 0.3 | -0.31 | ||
18 | AT1G26840 | origin recognition complex protein 6 | ARABIDOPSIS THALIANA ORIGIN RECOGNITION COMPLEX PROTEIN 6, origin recognition complex protein 6 |
0.85 | 0.31 | -0.33 | ||
19 | AT2G47610 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.85 | 0.29 | -0.32 | |||
20 | AT2G45710 | Zinc-binding ribosomal protein family protein | 0.84 | 0.33 | -0.32 | |||
21 | AT2G27720 | 60S acidic ribosomal protein family | 0.84 | 0.32 | -0.3 | |||
22 | AT3G22110 | 20S proteasome alpha subunit C1 | 20S proteasome alpha subunit C1 | 0.84 | 0.32 | -0.31 | ||
23 | AT2G27530 | Ribosomal protein L1p/L10e family | PIGGYBACK1 | 0.84 | 0.31 | -0.32 | ||
24 | AT1G48830 | Ribosomal protein S7e family protein | 0.84 | 0.34 | -0.32 | |||
25 | AT3G11400 | eukaryotic translation initiation factor 3G1 | ATEIF3G1, eukaryotic translation initiation factor 3G1 |
0.84 | 0.3 | -0.34 | ||
26 | AT4G31580 | serine/arginine-rich 22 | RS-containing zinc finger protein 22, RS-containing zinc finger protein 22, RS-CONTAINING ZINC FINGER PROTEIN 22, serine/arginine-rich 22, SRZ22 |
0.84 | 0.31 | -0.34 | ||
27 | AT5G02880 | ubiquitin-protein ligase 4 | ubiquitin-protein ligase 4 | -0.84 | 0.31 | -0.33 | ||
28 | AT2G19540 | Transducin family protein / WD-40 repeat family protein | 0.84 | 0.32 | -0.32 | |||
29 | AT5G41970 | Metal-dependent protein hydrolase | 0.83 | 0.32 | -0.31 | |||
30 | AT3G49720 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.83 | 0.32 | -0.32 | |||
31 | AT4G29390 | Ribosomal protein S30 family protein | 0.83 | 0.31 | -0.34 | |||
32 | AT3G49990 | unknown protein; Has 1524 Blast hits to 1298 proteins in 225 species: Archae - 9; Bacteria - 84; Metazoa - 474; Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes - 658 (source: NCBI BLink). |
0.83 | 0.3 | -0.32 | |||
33 | AT3G22300 | ribosomal protein S10 | ribosomal protein S10 | 0.83 | 0.32 | -0.32 | ||
34 | AT3G09200 | Ribosomal protein L10 family protein | 0.83 | 0.33 | -0.3 | |||
35 | AT3G02560 | Ribosomal protein S7e family protein | 0.83 | 0.33 | -0.31 | |||
36 | AT3G62840 | Small nuclear ribonucleoprotein family protein | 0.83 | 0.29 | -0.29 | |||
37 | AT3G59650 | mitochondrial ribosomal protein L51/S25/CI-B8 family protein |
0.83 | 0.33 | -0.32 | |||
38 | AT2G27710 | 60S acidic ribosomal protein family | 0.82 | 0.34 | -0.32 | |||
39 | AT2G29540 | RNApolymerase 14 kDa subunit | ATRPAC14, RNApolymerase 14 kDa subunit, RNApolymerase 14 kDa subunit |
0.82 | 0.31 | -0.31 | ||
40 | AT4G26430 | COP9 signalosome subunit 6B | COP9 signalosome subunit 6B | 0.82 | 0.33 | -0.32 | ||
41 | AT3G49910 | Translation protein SH3-like family protein | 0.82 | 0.32 | -0.31 | |||
42 | AT5G57460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 166 Blast hits to 166 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 112; Fungi - 4; Plants - 36; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). |
0.82 | 0.31 | -0.3 | |||
43 | AT3G51010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.82 | 0.28 | -0.32 | |||
44 | AT1G12270 | stress-inducible protein, putative | Hop1 | 0.82 | 0.3 | -0.32 | ||
45 | AT1G31660 | CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955); Has 475 Blast hits to 467 proteins in 210 species: Archae - 0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55; Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink). |
0.82 | 0.31 | -0.31 | |||
46 | AT3G43720 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.82 | 0.33 | -0.31 | |||
47 | AT3G25940 | TFIIB zinc-binding protein | 0.81 | 0.3 | -0.31 | |||
48 | AT3G07910 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reactive oxygen species modulator 1 (InterPro:IPR018450); Has 192 Blast hits to 192 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.81 | 0.3 | -0.31 | |||
49 | AT1G54770 | Fcf2 pre-rRNA processing protein | 0.81 | 0.3 | -0.33 | |||
50 | AT1G32440 | plastidial pyruvate kinase 3 | plastidial pyruvate kinase 3 | 0.81 | 0.31 | -0.31 | ||
51 | AT3G10730 | SAD1/UNC-84 domain protein 2 | ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2, SAD1/UNC-84 domain protein 2 |
0.81 | 0.32 | -0.3 | ||
52 | AT1G27390 | translocase outer membrane 20-2 | translocase outer membrane 20-2 | 0.81 | 0.31 | -0.3 | ||
53 | AT1G22920 | COP9 signalosome 5A | ARABIDOPSIS JAB1 HOMOLOG 1, COP9 signalosome 5A, JAB1 |
0.81 | 0.32 | -0.3 | ||
54 | AT1G14320 | Ribosomal protein L16p/L10e family protein | ribosomal protein L10, ribosomal protein L10 A, SUPPRESSOR OF ACAULIS 52 |
0.81 | 0.31 | -0.33 | ||
55 | AT3G52040 | unknown protein; Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.81 | 0.32 | -0.33 | |||
56 | AT3G43810 | calmodulin 7 | calmodulin 7 | 0.81 | 0.32 | -0.31 | ||
57 | AT5G08040 | mitochondrial import receptor subunit TOM5 homolog | mitochondrial import receptor subunit TOM5 homolog |
0.81 | 0.31 | -0.33 | ||
58 | AT2G26060 | Transducin/WD40 repeat-like superfamily protein | embryo defective 1345 | 0.81 | 0.32 | -0.33 | ||
59 | AT2G19720 | ribosomal protein S15A B | ribosomal protein S15A B | 0.81 | 0.31 | -0.34 | ||
60 | AT3G49010 | breast basic conserved 1 | breast basic conserved 1, breast basic conserved 1, 40S RIBOSOMAL PROTEIN |
0.8 | 0.3 | -0.31 | ||
61 | AT1G04340 | HR-like lesion-inducing protein-related | 0.8 | 0.32 | -0.32 | |||
62 | AT2G45860 | unknown protein; Has 32 Blast hits to 32 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.8 | 0.33 | -0.3 | |||
63 | AT5G41950 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.8 | 0.3 | -0.32 | |||
64 | AT4G39280 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative |
0.8 | 0.32 | -0.32 | |||
65 | AT5G67630 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.8 | 0.31 | -0.31 | |||
66 | AT1G26630 | Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein |
EUKARYOTIC ELONGATION FACTOR 5A-2, EUKARYOTIC ELONGATION FACTOR 5A-2, FUMONISIN B1-RESISTANT12 |
0.8 | 0.34 | -0.3 | ||
67 | AT5G06360 | Ribosomal protein S8e family protein | 0.8 | 0.33 | -0.3 | |||
68 | AT1G52930 | Ribosomal RNA processing Brix domain protein | 0.8 | 0.31 | -0.31 | |||
69 | AT5G59180 | DNA-directed RNA polymerase II | NRPB7 | 0.8 | 0.33 | -0.31 | ||
70 | AT2G43460 | Ribosomal L38e protein family | 0.8 | 0.31 | -0.31 | |||
71 | AT3G46830 | RAB GTPase homolog A2C | ARABIDOPSIS RAB GTPASE HOMOLOG A2C, ATRAB11A, RAB GTPase homolog A2C, RAB GTPASE HOMOLOG A2C, RAB GTPase homolog A2C |
0.8 | 0.33 | -0.31 | ||
72 | AT2G38800 | Plant calmodulin-binding protein-related | -0.8 | 0.3 | -0.33 | |||
73 | AT3G04830 | Protein prenylyltransferase superfamily protein | 0.79 | 0.31 | -0.32 | |||
74 | AT2G43770 | Transducin/WD40 repeat-like superfamily protein | 0.79 | 0.31 | -0.31 | |||
75 | AT4G34670 | Ribosomal protein S3Ae | 0.79 | 0.31 | -0.29 | |||
76 | AT1G72770 | homology to ABI1 | HYPERSENSITIVE TO ABA1 | -0.79 | 0.32 | -0.32 | ||
77 | AT3G15460 | Ribosomal RNA processing Brix domain protein | 0.79 | 0.31 | -0.31 | |||
78 | AT1G67620 | Lojap-related protein | 0.79 | 0.33 | -0.31 | |||
79 | AT4G38060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.77 | 0.33 | -0.32 | |||
80 | AT1G15740 | Leucine-rich repeat family protein | -0.76 | 0.32 | -0.32 | |||
81 | AT1G14790 | RNA-dependent RNA polymerase 1 | ATRDRP1, RNA-dependent RNA polymerase 1 |
-0.75 | 0.33 | -0.32 | ||
82 | AT1G65660 | Pre-mRNA splicing Prp18-interacting factor | SWELLMAP 1 | -0.75 | 0.3 | -0.31 | ||
83 | AT2G35060 | K+ uptake permease 11 | K+ uptake permease 11 | -0.74 | 0.32 | -0.32 | ||
84 | AT4G19160 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.74 | 0.32 | -0.3 | |||
85 | AT1G72650 | TRF-like 6 | TRF-like 6 | -0.72 | 0.31 | -0.34 | ||
86 | AT1G28260 | Telomerase activating protein Est1 | -0.72 | 0.34 | -0.3 | |||
87 | AT4G04740 | calcium-dependent protein kinase 23 | ATCPK23, calcium-dependent protein kinase 23 |
-0.71 | 0.3 | -0.32 | ||
88 | AT3G20120 | cytochrome P450, family 705, subfamily A, polypeptide 21 | cytochrome P450, family 705, subfamily A, polypeptide 21 |
-0.71 | 0.31 | -0.31 | ||
89 | AT4G23980 | auxin response factor 9 | auxin response factor 9 | -0.7 | 0.31 | -0.34 | ||
90 | AT1G70300 | K+ uptake permease 6 | K+ uptake permease 6 | -0.7 | 0.33 | -0.3 | ||
91 | AT1G50410 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
-0.7 | 0.33 | -0.32 | |||
92 | AT1G09910 | Rhamnogalacturonate lyase family protein | -0.7 | 0.33 | -0.33 | |||
93 | AT5G13690 | alpha-N-acetylglucosaminidase family / NAGLU family | CYCLOPS 1, N-ACETYL-GLUCOSAMINIDASE |
-0.69 | 0.3 | -0.29 | ||
94 | AT5G43840 | heat shock transcription factor A6A | heat shock transcription factor A6A, heat shock transcription factor A6A |
-0.69 | 0.33 | -0.29 | ||
95 | AT1G77420 | alpha/beta-Hydrolases superfamily protein | -0.69 | 0.33 | -0.33 | |||
96 | AT2G36960 | TSL-kinase interacting protein 1 | TSL-kinase interacting protein 1 | -0.69 | 0.31 | -0.34 | ||
97 | AT2G22660 | Protein of unknown function (duplicated DUF1399) | -0.69 | 0.32 | -0.32 | |||
98 | AT3G27670 | ARM repeat superfamily protein | RESURRECTION1 | -0.68 | 0.33 | -0.31 | ||
99 | AT2G14520 | CBS domain-containing protein with a domain of unknown function (DUF21) |
-0.68 | 0.34 | -0.31 | |||
100 | AT1G80310 | sulfate transmembrane transporters | molybdate transporter 2 | -0.68 | 0.31 | -0.32 | ||
101 | AT5G24350 | CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.67 | 0.31 | -0.33 | |||
102 | AT3G17980 | Calcium-dependent lipid-binding (CaLB domain) family protein |
Arabidopsis thaliana C2 domain, C2 domain |
-0.66 | 0.31 | -0.3 | ||
103 | AT1G16730 | unknown protein 6 | unknown protein 6 | -0.66 | 0.32 | -0.32 | ||
104 | AT2G46690 | SAUR-like auxin-responsive protein family | -0.66 | 0.33 | -0.32 | |||
105 | AT1G17680 | tetratricopeptide repeat (TPR)-containing protein | -0.66 | 0.3 | -0.34 | |||
106 | AT4G36980 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479 proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source: NCBI BLink). |
-0.66 | 0.33 | -0.32 | |||
107 | AT4G18990 | xyloglucan endotransglucosylase/hydrolase 29 | xyloglucan endotransglucosylase/hydrolase 29 |
-0.66 | 0.32 | -0.3 | ||
108 | AT2G31960 | glucan synthase-like 3 | glucan synthase-like 3, ATGSL3, GSL03, glucan synthase-like 3 |
-0.65 | 0.32 | -0.29 | ||
109 | AT5G50170 | C2 calcium/lipid-binding and GRAM domain containing protein | -0.65 | 0.33 | -0.32 | |||
110 | AT5G53890 | phytosylfokine-alpha receptor 2 | AtPSKR2, phytosylfokine-alpha receptor 2 |
-0.64 | 0.33 | -0.34 | ||
111 | AT3G54290 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); Has 59 Blast hits to 59 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.64 | 0.33 | -0.3 | |||
112 | AT2G17975 | zinc finger (Ran-binding) family protein | -0.63 | 0.3 | -0.29 | |||
113 | AT5G42600 | marneral synthase | marneral synthase | -0.63 | 0.33 | -0.32 | ||
114 | AT2G37650 | GRAS family transcription factor | -0.63 | 0.3 | -0.33 |