AGICode | AT1G51450 |
Description | TRAUCO |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G51450 | TRAUCO | ARABIDOPSIS Ash2 RELATIVE, TRAUCO | 1 | 0.31 | -0.33 | ||
2 | AT5G04670 | Enhancer of polycomb-like transcription factor protein | 0.66 | 0.33 | -0.3 | |||
3 | AT2G17870 | cold shock domain protein 3 | ARABIDOPSIS COLD SHOCK DOMAIN PROTEIN 3, cold shock domain protein 3 |
0.61 | 0.3 | -0.33 | ||
4 | AT1G54650 | Methyltransferase family protein | 0.6 | 0.32 | -0.3 | |||
5 | AT2G39590 | Ribosomal protein S8 family protein | 0.58 | 0.33 | -0.31 | |||
6 | AT5G48280 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.57 | 0.35 | -0.31 | |||
7 | AT4G16100 | Protein of unknown function (DUF789) | 0.57 | 0.33 | -0.32 | |||
8 | AT3G03880 | Protein of unknown function (DUF1639) | 0.57 | 0.32 | -0.33 | |||
9 | AT4G39753 | Galactose oxidase/kelch repeat superfamily protein | 0.56 | 0.32 | -0.3 | |||
10 | AT4G15040 | Subtilisin-like serine endopeptidase family protein | -0.56 | 0.31 | -0.33 | |||
11 | AT3G17590 | transcription regulatory protein SNF5, putative (BSH) | BUSHY GROWTH, CHE1 | 0.54 | 0.31 | -0.32 | ||
12 | AT1G04330 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.34 | -0.33 | |||
13 | AT2G04860 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.54 | 0.3 | -0.33 | |||
14 | AT2G07300 | transposable element gene | 0.53 | 0.33 | -0.34 | |||
15 | AT2G30960 | unknown protein; Has 4906 Blast hits to 2903 proteins in 334 species: Archae - 5; Bacteria - 381; Metazoa - 1639; Fungi - 509; Plants - 244; Viruses - 5; Other Eukaryotes - 2123 (source: NCBI BLink). |
0.53 | 0.31 | -0.3 | |||
16 | AT1G54550 | F-box and associated interaction domains-containing protein | 0.53 | 0.31 | -0.32 | |||
17 | AT1G50300 | TBP-associated factor 15 | TBP-associated factor 15 | 0.53 | 0.32 | -0.31 | ||
18 | AT5G35340 | transposable element gene | 0.53 | 0.3 | -0.31 | |||
19 | AT5G49140 | Disease resistance protein (TIR-NBS-LRR class) family | 0.53 | 0.29 | -0.34 | |||
20 | AT2G25720 | unknown protein; Has 38 Blast hits to 38 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.3 | -0.31 | |||
21 | AT4G33180 | alpha/beta-Hydrolases superfamily protein | 0.53 | 0.31 | -0.31 | |||
22 | AT3G17080 | Plant self-incompatibility protein S1 family | 0.52 | 0.33 | -0.32 | |||
23 | AT4G34660 | SH3 domain-containing protein | 0.52 | 0.33 | -0.32 | |||
24 | AT5G18750 | DNAJ heat shock N-terminal domain-containing protein | 0.52 | 0.32 | -0.3 | |||
25 | AT1G43650 | nodulin MtN21 /EamA-like transporter family protein | -0.52 | 0.33 | -0.32 | |||
26 | AT3G03750 | SET domain protein 20 | SET domain protein 20, SUVR3 | 0.52 | 0.31 | -0.33 | ||
27 | AT1G76510 | ARID/BRIGHT DNA-binding domain-containing protein | 0.51 | 0.32 | -0.34 | |||
28 | AT1G17540 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
0.51 | 0.29 | -0.31 | |||
29 | AT3G12980 | histone acetyltransferase of the CBP family 5 | HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 5, histone acetyltransferase of the CBP family 5 |
0.51 | 0.32 | -0.3 | ||
30 | AT2G15340 | glycine-rich protein | -0.51 | 0.31 | -0.3 | |||
31 | AT5G58280 | AP2/B3-like transcriptional factor family protein | 0.5 | 0.31 | -0.3 | |||
32 | AT2G28970 | Leucine-rich repeat protein kinase family protein | 0.5 | 0.31 | -0.32 | |||
33 | AT5G62160 | zinc transporter 12 precursor | zinc transporter 12 precursor, zinc transporter 12 precursor |
-0.5 | 0.31 | -0.31 | ||
34 | AT1G13750 | Purple acid phosphatases superfamily protein | -0.5 | 0.34 | -0.29 | |||
35 | AT2G24140 | Protein of unknown function, DUF593 | 0.5 | 0.31 | -0.33 | |||
36 | AT5G03000 | Galactose oxidase/kelch repeat superfamily protein | -0.5 | 0.31 | -0.32 | |||
37 | AT5G35760 | Beta-galactosidase related protein | 0.49 | 0.33 | -0.3 | |||
38 | AT5G18810 | SC35-like splicing factor 28 | SC35-like splicing factor 28, SC35-like splicing factor 28 |
0.49 | 0.33 | -0.3 | ||
39 | AT4G18350 | nine-cis-epoxycarotenoid dioxygenase 2 | NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2, nine-cis-epoxycarotenoid dioxygenase 2 |
0.49 | 0.31 | -0.32 | ||
40 | AT5G65850 | F-box and associated interaction domains-containing protein | 0.49 | 0.32 | -0.31 | |||
41 | AT2G26460 | RED family protein | SUPPRESSORS OF MEC-8 AND UNC-52 2 | 0.49 | 0.33 | -0.31 | ||
42 | AT5G14380 | arabinogalactan protein 6 | arabinogalactan protein 6 | -0.49 | 0.31 | -0.33 | ||
43 | AT2G45840 | Arabidopsis thaliana protein of unknown function (DUF821) | -0.47 | 0.32 | -0.3 | |||
44 | AT3G54610 | histone acetyltransferase of the GNAT family 1 | BIG TOP, general control non-repressible 5, HAC3, HAG01, histone acetyltransferase of the GNAT family 1, HISTONE ACETYLTRANSFERASE 1 |
-0.46 | 0.32 | -0.35 | ||
45 | AT1G54880 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.45 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
46 | C0101 | Glutamic acid | D,L-Glutamic acid | L-Glutamate; D-Glutamate | tyrosine biosynthesis I, serine biosynthesis, tyrosine degradation I, uridine-5'-phosphate biosynthesis, proline biosynthesis III, glutamate biosynthesis V, glycine biosynthesis, lysine biosynthesis VI, leucine biosynthesis, UDP-N-acetyl-D-glucosamine biosynthesis II, tRNA charging, gamma-glutamyl cycle (plant pathway), L-Ndelta-acetylornithine biosynthesis, tryptophan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, 4-hydroxyphenylpyruvate biosynthesis, proline degradation II, photorespiration, 5-aminoimidazole ribonucleotide biosynthesis I, folate polyglutamylation, ammonia assimilation cycle II, arginine degradation VI (arginase 2 pathway), asparagine biosynthesis III (tRNA-dependent), tetrahydrofolate biosynthesis II, glutamine biosynthesis III, valine degradation I, glucosinolate biosynthesis from dihomomethionine, phenylalanine biosynthesis II, citrulline biosynthesis, gamma-glutamyl cycle, indole-3-acetyl-amino acid biosynthesis, purine nucleotides de novo biosynthesis II, IAA biosynthesis I, NAD biosynthesis I (from aspartate), alanine biosynthesis II, purine nucleotide metabolism (phosphotransfer and nucleotide modification), glucosinolate biosynthesis from homomethionine, phenylalanine degradation III, ornithine biosynthesis, glutathione-mediated detoxification II, pyrimidine ribonucleotides interconversion, indole glucosinolate breakdown (active in intact plant cell), aspartate degradation II, glucosinolate biosynthesis from trihomomethionine, glucosinolate biosynthesis from tetrahomomethionine, L-glutamine biosynthesis II (tRNA-dependent), camalexin biosynthesis, glutathione biosynthesis, aspartate biosynthesis, leucine degradation I, glutathione degradation, pyridine nucleotide cycling (plants), glutamate degradation I, valine biosynthesis, glucosinolate biosynthesis from tryptophan, arginine biosynthesis II (acetyl cycle), isoleucine biosynthesis I (from threonine), arginine biosynthesis I, arginine degradation I (arginase pathway), glucosinolate biosynthesis from hexahomomethionine, tetrapyrrole biosynthesis I, alanine degradation III, pyridoxal 5'-phosphate biosynthesis II, glutamate biosynthesis IV, glutamate degradation IV, asparagine biosynthesis I, histidine biosynthesis, lysine degradation II, pantothenate biosynthesis, isoleucine degradation I, folate polyglutamylation II, glutamine biosynthesis I, glucosinolate biosynthesis from phenylalanine, tyrosine biosynthesis II, nitrate reduction II (assimilatory), alanine degradation II (to D-lactate) |
-0.55 | 0.32 | -0.34 | ||
47 | C0060 | Asparagine | D,L-Asparagine | L-Asparagine | asparagine degradation I, asparagine biosynthesis III (tRNA-dependent), asparagine biosynthesis I, tRNA charging, cyanide detoxification II |
-0.51 | 0.34 | -0.29 |