AT2G47250 : -
Query Information
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AGICode AT2G47250
Description RNA helicase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G47250 RNA helicase family protein 1 0.3 -0.29
2 AT3G17940 Galactose mutarotase-like superfamily protein -0.77 0.3 -0.32
3 AT1G26190 Phosphoribulokinase / Uridine kinase family 0.77 0.3 -0.31
4 AT4G28990 RNA-binding protein-related 0.73 0.31 -0.32
5 AT3G17030 Nucleic acid-binding proteins superfamily 0.73 0.29 -0.35
6 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein 0.73 0.32 -0.31
7 AT1G67560 PLAT/LH2 domain-containing lipoxygenase family protein Arabidopsis thaliana lipoxygenase
6, lipoxygenase 6		 -0.73 0.34 -0.32
8 AT4G32420 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.73 0.31 -0.32
9 AT5G47740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.72 0.33 -0.33
10 AT2G13540 ARM repeat superfamily protein ABA HYPERSENSITIVE 1, ATCBP80,
CAP-BINDING PROTEIN 80, ENSALADA		 0.72 0.3 -0.3
11 AT2G31010 Protein kinase superfamily protein 0.72 0.31 -0.33
12 AT2G02090 SNF2 domain-containing protein / helicase domain-containing
protein		 CHA19, CHROMATIN REMODELING 19,
ETL1		 0.72 0.3 -0.31
13 AT4G30530 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 1 -0.72 0.31 -0.31
14 AT5G43280 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
DELTA(3,5),DELTA(2,4)-DIENOYL-COA
ISOMERASE 1		 -0.72 0.3 -0.33
15 AT1G33260 Protein kinase superfamily protein -0.71 0.3 -0.32
16 AT3G02550 LOB domain-containing protein 41 LOB domain-containing protein 41 -0.71 0.33 -0.34
17 AT5G22555 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.7 0.33 -0.32
18 AT3G14730 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.32 -0.3
19 AT1G79080 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.31 -0.3
20 AT5G11970 Protein of unknown function (DUF3511) -0.7 0.29 -0.3
21 AT3G54350 Forkhead-associated (FHA) domain-containing protein embryo defective 1967 0.7 0.3 -0.3
22 AT1G16680 Chaperone DnaJ-domain superfamily protein 0.69 0.31 -0.31
23 AT1G79880 RNA recognition motif (RRM)-containing protein 0.69 0.3 -0.33
24 AT1G61010 cleavage and polyadenylation specificity factor 73-I cleavage and polyadenylation
specificity factor 73-I		 0.69 0.29 -0.34
25 AT2G06050 oxophytodienoate-reductase 3 AtOPR3, DELAYED DEHISCENCE 1,
oxophytodienoate-reductase 3		 -0.69 0.3 -0.32
26 AT5G17440 LUC7 related protein 0.69 0.32 -0.32
27 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 -0.69 0.32 -0.32
28 AT5G09880 Splicing factor, CC1-like 0.69 0.31 -0.3
29 AT5G13480 Transducin/WD40 repeat-like superfamily protein FY 0.68 0.33 -0.31
30 AT2G25280 CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of
ErbB2-driven cell motility (Memo), related
(InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins
in 474 species: Archae - 213; Bacteria - 366; Metazoa -
159; Fungi - 135; Plants - 54; Viruses - 0; Other
Eukaryotes - 147 (source: NCBI BLink).		 -0.68 0.33 -0.3
31 AT1G17080 Ribosomal protein L18ae family -0.68 0.32 -0.31
32 AT1G64200 vacuolar H+-ATPase subunit E isoform 3 vacuolar H+-ATPase subunit E
isoform 3		 -0.68 0.32 -0.31
33 AT1G68340 Protein of unknown function (DUF1639) -0.68 0.33 -0.34
34 AT5G26990 Drought-responsive family protein -0.67 0.33 -0.3
35 AT3G26540 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.34 -0.31
36 AT4G13950 ralf-like 31 ralf-like 31 -0.67 0.3 -0.31
37 AT5G47240 nudix hydrolase homolog 8 nudix hydrolase homolog 8, nudix
hydrolase homolog 8		 -0.67 0.33 -0.32
38 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 -0.67 0.32 -0.34
39 AT1G50200 Alanyl-tRNA synthetase ACD, Alanyl-tRNA synthetase 0.67 0.3 -0.31
40 AT2G47850 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.67 0.3 -0.3
41 AT4G02010 Protein kinase superfamily protein 0.67 0.3 -0.31
42 AT2G20630 PP2C induced by AVRRPM1 PP2C induced by AVRRPM1 -0.67 0.3 -0.31
43 AT1G76200 unknown protein; Has 96 Blast hits to 96 proteins in 48
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 47;
Plants - 38; Viruses - 0; Other Eukaryotes - 11 (source:
NCBI BLink).		 -0.67 0.32 -0.32
44 AT3G63080 glutathione peroxidase 5 glutathione peroxidase 5,
glutathione peroxidase 5, maternal
effect embryo arrest 42		 -0.66 0.32 -0.31
45 AT1G78490 cytochrome P450, family 708, subfamily A, polypeptide 3 cytochrome P450, family 708,
subfamily A, polypeptide 3		 -0.66 0.32 -0.3
46 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 -0.66 0.33 -0.32
47 AT3G27220 Galactose oxidase/kelch repeat superfamily protein -0.66 0.35 -0.3
48 AT3G10040 sequence-specific DNA binding transcription factors -0.66 0.3 -0.3
49 AT2G27580 A20/AN1-like zinc finger family protein -0.66 0.3 -0.3
50 AT5G15570 Bromodomain transcription factor 0.66 0.32 -0.3
51 AT3G04210 Disease resistance protein (TIR-NBS class) -0.66 0.3 -0.3
52 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 0.66 0.32 -0.32
53 AT4G04830 methionine sulfoxide reductase B5 methionine sulfoxide reductase B5,
methionine sulfoxide reductase B5		 -0.66 0.31 -0.3
54 AT2G34690 Glycolipid transfer protein (GLTP) family protein ACCELERATED CELL DEATH 11 -0.66 0.32 -0.32
55 AT3G10180 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.31 -0.32
56 AT4G01897 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF952 (InterPro:IPR009297); Has 763 Blast
hits to 763 proteins in 180 species: Archae - 0; Bacteria -
351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0;
Other Eukaryotes - 383 (source: NCBI BLink).		 -0.65 0.31 -0.29
57 AT1G12110 nitrate transporter 1.1 ARABIDOPSIS THALIANA NITRATE
TRANSPORTER 1, B-1, CHLORINA 1,
CHL1-1, NITRATE TRANSPORTER 1,
nitrate transporter 1.1		 -0.65 0.32 -0.31
58 AT5G51980 Transducin/WD40 repeat-like superfamily protein -0.65 0.31 -0.31
59 AT3G54480 SKP1/ASK-interacting protein 5 SKP1/ASK-interacting protein 5,
SKP5		 -0.65 0.31 -0.32
60 AT1G71060 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.3 -0.31
61 AT5G54940 Translation initiation factor SUI1 family protein -0.65 0.32 -0.32
62 AT1G44790 ChaC-like family protein -0.65 0.3 -0.3
63 AT5G28740 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.31 -0.32
64 AT1G19670 chlorophyllase 1 chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1,
chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1		 -0.65 0.31 -0.33
65 AT1G33055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: anaerobic respiration; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.65 0.32 -0.32
66 AT5G45400 Replication factor-A protein 1-related ATRPA70C, RPA70C 0.65 0.32 -0.31
67 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.3 -0.31
68 AT4G10100 co-factor for nitrate, reductase and xanthine dehydrogenase
7		 co-factor for nitrate, reductase
and xanthine dehydrogenase 7, SIR5		 -0.65 0.36 -0.32
69 AT1G26960 homeobox protein 23 homeobox protein 23, homeobox
protein 23		 -0.65 0.31 -0.31
70 AT3G03270 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.65 0.32 -0.29
71 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 -0.65 0.31 -0.31
72 AT2G46080 CONTAINS InterPro DOMAIN/s: Protein BYPASS related
(InterPro:IPR008511); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF793)
(TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in
20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi -
0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.3 -0.31
73 AT3G27310 plant UBX domain-containing protein 1 plant UBX domain-containing
protein 1		 -0.64 0.3 -0.3
74 AT1G47330 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.64 0.31 -0.32
75 AT1G15280 CASC3/Barentsz eIF4AIII binding 0.64 0.3 -0.3
76 AT1G77720 putative protein kinase 1 putative protein kinase 1 0.64 0.33 -0.32
77 AT1G77020 DNAJ heat shock N-terminal domain-containing protein -0.64 0.3 -0.32
78 AT4G30500 Protein of unknown function (DUF788) -0.64 0.34 -0.31
79 AT1G61150 LisH and RanBPM domains containing protein -0.64 0.31 -0.34
80 AT5G03630 Pyridine nucleotide-disulphide oxidoreductase family
protein		 ATMDAR2 -0.64 0.31 -0.31
81 AT1G30330 auxin response factor 6 auxin response factor 6 0.64 0.31 -0.31
82 AT2G17220 Protein kinase superfamily protein kinase 3 -0.64 0.31 -0.33
83 AT1G13280 allene oxide cyclase 4 allene oxide cyclase 4 -0.64 0.3 -0.31
84 AT5G51280 DEAD-box protein abstrakt, putative 0.64 0.31 -0.33
85 AT4G15415 Protein phosphatase 2A regulatory B subunit family protein ATB' GAMMA 0.64 0.32 -0.3
86 AT5G03070 importin alpha isoform 9 importin alpha isoform 9 0.64 0.32 -0.32
87 AT1G25320 Leucine-rich repeat protein kinase family protein 0.64 0.31 -0.31
88 AT2G29210 splicing factor PWI domain-containing protein 0.64 0.31 -0.31
89 AT3G23330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.33 -0.31
90 AT3G26450 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.34 -0.3
91 AT1G10320 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.63 0.3 -0.31
92 AT3G60400 Mitochondrial transcription termination factor family
protein		 0.63 0.3 -0.32
93 AT5G22950 SNF7 family protein VPS24.1 -0.63 0.33 -0.29
94 AT2G42670 Protein of unknown function (DUF1637) -0.63 0.3 -0.31
95 AT1G03910 EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Cactin protein,
cactus-binding domain, C-terminal (InterPro:IPR019134),
Cactin, central region (InterPro:IPR018816); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G36815.2); Has 11711 Blast hits to 7382 proteins
in 452 species: Archae - 31; Bacteria - 352; Metazoa -
6006; Fungi - 1138; Plants - 599; Viruses - 33; Other
Eukaryotes - 3552 (source: NCBI BLink).		 0.63 0.32 -0.32
96 AT5G67150 HXXXD-type acyl-transferase family protein -0.63 0.33 -0.31
97 AT4G10270 Wound-responsive family protein -0.63 0.3 -0.3
98 AT2G20680 Glycosyl hydrolase superfamily protein AtMAN2, endo-beta-mannase 2 0.63 0.31 -0.31
99 AT1G47420 succinate dehydrogenase 5 succinate dehydrogenase 5 -0.63 0.33 -0.32
100 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.63 0.3 -0.32
101 AT5G56020 Got1/Sft2-like vescicle transport protein family -0.63 0.31 -0.31
102 AT3G18790 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like
splicing (InterPro:IPR009360); Has 1147 Blast hits to 965
proteins in 236 species: Archae - 12; Bacteria - 13;
Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other
Eukaryotes - 483 (source: NCBI BLink).		 0.63 0.31 -0.29
103 AT1G23960 Protein of unknown function (DUF626) -0.63 0.34 -0.31
104 AT5G16780 SART-1 family DEFECTIVELY ORGANIZED TRIBUTARIES
2, MERISTEM-DEFECTIVE		 0.62 0.31 -0.31
105 AT2G30930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plasma membrane, membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G06540.1); Has 194 Blast hits to 176 proteins in
78 species: Archae - 0; Bacteria - 101; Metazoa - 15; Fungi
- 25; Plants - 12; Viruses - 4; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.62 0.32 -0.34
106 AT1G35330 RING/U-box superfamily protein -0.62 0.32 -0.31
107 AT4G19045 Mob1/phocein family protein -0.62 0.33 -0.31
108 AT3G22890 ATP sulfurylase 1 ATP sulfurylase 1 -0.62 0.33 -0.32
109 AT5G24340 3'-5' exonuclease domain-containing protein 0.62 0.3 -0.32
110 AT1G12240 Glycosyl hydrolases family 32 protein ATBETAFRUCT4, VACUOLAR INVERTASE -0.62 0.29 -0.32
111 AT4G14680 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS3 -0.62 0.31 -0.31
112 AT1G19300 Nucleotide-diphospho-sugar transferases superfamily protein ATGATL1,
GALACTURONOSYLTRANSFERASE-LIKE 1,
GAOLAOZHUANGREN 1, PARVUS		 -0.62 0.31 -0.31
113 AT1G69370 chorismate mutase 3 cm-3, chorismate mutase 3 -0.62 0.33 -0.34
114 AT5G55660 DEK domain-containing chromatin associated protein 0.62 0.31 -0.3
115 AT3G62790 NADH-ubiquinone oxidoreductase-related -0.61 0.31 -0.33
116 AT1G03560 Pentatricopeptide repeat (PPR-like) superfamily protein 0.61 0.32 -0.3
117 AT2G19310 HSP20-like chaperones superfamily protein -0.61 0.29 -0.33
118 AT5G19120 Eukaryotic aspartyl protease family protein -0.61 0.32 -0.34
119 AT3G13780 SMAD/FHA domain-containing protein -0.61 0.27 -0.32
120 AT3G61690 nucleotidyltransferases 0.61 0.31 -0.31
121 AT5G16190 cellulose synthase like A11 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE A11, cellulose
synthase like A11		 -0.61 0.3 -0.32
122 AT5G43940 GroES-like zinc-binding dehydrogenase family protein ALCOHOL DEHYDROGENASE 2, ATGSNOR1,
S-NITROSOGLUTATHIONE REDUCTASE,
sensitive to hot temperatures 5,
PARAQUAT RESISTANT 2		 -0.61 0.32 -0.33
123 AT2G14750 APS kinase APS KINASE 1, APS kinase,
ADENOSINE-5'-PHOSPHOSULFATE (APS)
KINASE 1, ATAKN1		 -0.61 0.33 -0.34
124 AT5G43320 casein kinase I-like 8 casein kinase I-like 8 -0.61 0.33 -0.31
125 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.33 -0.32
126 AT1G52630 O-fucosyltransferase family protein 0.61 0.31 -0.31
127 AT4G07430 transposable element gene -0.61 0.31 -0.35
128 AT2G32630 Pentatricopeptide repeat (PPR-like) superfamily protein 0.61 0.3 -0.35
129 AT4G35750 SEC14 cytosolic factor family protein / phosphoglyceride
transfer family protein		 -0.61 0.32 -0.32
130 AT2G35510 similar to RCD one 1 similar to RCD one 1 0.61 0.32 -0.31
131 AT4G21780 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.61 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0093 Galactinol dihydrate - Galactinol galactosylcyclitol biosynthesis,
stachyose biosynthesis,
ajugose biosynthesis I (galactinol-dependent) 		0.68 0.47 -0.44 C0093